Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI16987 Sapria himalayana HOM05D001734 ORTHO05D003483 4.3e-86 321.2 157 100.0
Atru.chr9.2479 Acer truncatum HOM05D001734 ORTHO05D003483 5.5e-25 118.2 124 52.4
Potri.015G076650 Populus trichocarpa HOM05D001734 ORTHO05D003483 5.5e-25 118.2 124 52.4
Aqoxy3G02937 Aquilegia oxysepala HOM05D001734 ORTHO05D003483 1.6e-24 116.7 123 52.0
Sabra15G0101700 Salix brachista HOM05D001734 ORTHO05D003483 1.6e-24 116.7 124 52.4
Ciclev10018427m.g Citrus clementina HOM05D001734 ORTHO05D003483 8.0e-24 114.4 124 51.6
Lj9A448G35 Lonicera japonica HOM05D001734 ORTHO05D003483 8.0e-24 114.4 124 51.6
Manes.06G105000 Manihot esculenta HOM05D001734 ORTHO05D003483 8.0e-24 114.4 124 50.8
Cpa.g.sc76.54 Carica papaya HOM05D001734 ORTHO05D003483 1.8e-23 113.2 123 51.2
Dinv20652 Davidia involucrata HOM05D001734 ORTHO05D003483 1.8e-23 113.2 124 51.6
Eucgr.K02842 Eucalyptus grandis HOM05D001734 ORTHO05D003483 1.8e-23 113.2 124 51.6
QL10p011601 Quercus lobata HOM05D001734 ORTHO05D003483 1.8e-23 113.2 127 50.4
COL.COLO4_30039 Corchorus olitorius HOM05D001734 ORTHO05D003483 2.3e-23 112.8 124 51.6
MD06G1173700 Malus domestica HOM05D001734 ORTHO05D003483 3.0e-23 112.5 127 50.4
Haze_07473 Corylus avellana HOM05D001734 ORTHO05D003483 4.0e-23 112.1 124 50.0
Gohir.A09G171700 Gossypium hirsutum HOM05D001734 ORTHO05D003483 5.2e-23 111.7 124 50.8
TAR629G1256 Trochodendron aralioides HOM05D001734 ORTHO05D003483 5.2e-23 111.7 124 50.8
Hund02744 Selenicereus undatus HOM05D001734 ORTHO05D003483 8.8e-23 110.9 124 50.8
Actinidia19322 Actinidia chinensis HOM05D001734 ORTHO05D003483 1.2e-22 110.5 124 51.6
MBI10_g06739_MAGBIO Magnolia biondii HOM05D001734 ORTHO05D003483 1.5e-22 110.2 127 48.8
Cfa019134 Carpinus fangiana HOM05D001734 ORTHO05D003483 2.0e-22 109.8 124 49.2
RcHm_v2.0_Chr6g0271131 Rosa chinensis HOM05D001734 ORTHO05D003483 2.0e-22 109.8 124 49.2
Solyc03g112950.4 Solanum lycopersicum HOM05D001734 ORTHO05D003483 2.0e-22 109.8 124 51.6
TWI14G0283 Tripterygium wilfordii HOM05D001734 ORTHO05D003483 2.0e-22 109.8 124 50.0
CsaV3_1G001470 Cucumis sativus L. HOM05D001734 ORTHO05D003483 2.6e-22 109.4 124 49.2
Lj1g0011912 Lotus japonicus HOM05D001734 ORTHO05D003483 2.6e-22 109.4 127 49.6
GSVIVG01007755001 Vitis vinifera HOM05D001734 ORTHO05D003483 2.6e-22 109.4 124 49.2
Gohir.D09G167401 Gossypium hirsutum HOM05D001734 ORTHO05D003483 3.4e-22 109.0 124 49.2
Gorai.006G189100 Gossypium raimondii HOM05D001734 ORTHO05D003483 3.4e-22 109.0 124 49.2
Prupe.5G173600 Prunus persica HOM05D001734 ORTHO05D003483 3.4e-22 109.0 124 49.2
Sed0023277 Sechium edule HOM05D001734 ORTHO05D003483 3.4e-22 109.0 124 49.2
Rhsim08G0157900 Rhododendron simsii HOM05D001734 ORTHO05D003483 4.4e-22 108.6 124 52.4
Ca_16176_v3 Cicer arietinum L. HOM05D001734 ORTHO05D003483 5.7e-22 108.2 124 50.8
MELO3C017087.2 Cucumis melo HOM05D001734 ORTHO05D003483 5.7e-22 108.2 124 49.2
Nn4g22757 Nelumbo nucifera HOM05D001734 ORTHO05D003483 5.7e-22 108.2 127 48.0
FvH4_2g11670 Fragaria vesca HOM05D001734 ORTHO05D003483 7.5e-22 107.8 124 49.2
FAN24G1896 Fragaria x ananassa HOM05D001734 ORTHO05D003483 7.5e-22 107.8 124 49.2
CAN.G1305.19 Capsicum annuum HOM05D001734 ORTHO05D003483 9.8e-22 107.5 124 50.0
PSO063G0326 Papaver somniferum HOM05D001734 ORTHO05D003483 9.8e-22 107.5 127 48.0
DCAR_026136 Daucus carota HOM05D001734 ORTHO05D003483 1.3e-21 107.1 124 50.0
Medtr3g077860 Medicago truncatula HOM05D001734 ORTHO05D003483 1.3e-21 107.1 124 50.0
Oeu016387.4 Olea europaea HOM05D001734 ORTHO05D003483 1.3e-21 107.1 124 49.2
EL10Ac5g10743 Beta vulgaris HOM05D001734 ORTHO05D003483 1.7e-21 106.7 124 49.2
AUR62030960 Chenopodium quinoa HOM05D001734 ORTHO05D003483 1.7e-21 106.7 123 49.6
CiPaw.11G026100 Carya illinoinensis HOM05D001734 ORTHO05D003483 2.8e-21 105.9 124 50.0
ClCG06G017040 Citrullus lanatus HOM05D001734 ORTHO05D003483 2.8e-21 105.9 124 48.4
Nitab4.5_0000984g0090 Nicotiana tabacum HOM05D001734 ORTHO05D003483 2.8e-21 105.9 124 48.4
Peaxi162Scf00009g00114 Petunia axillaris HOM05D001734 ORTHO05D003483 2.8e-21 105.9 124 48.4
Psat5g114800 Pisum sativum HOM05D001734 ORTHO05D003483 2.8e-21 105.9 124 50.0
AUR62008208 Chenopodium quinoa HOM05D001734 ORTHO05D003483 3.7e-21 105.5 123 48.8
FAN15G3378 Fragaria x ananassa HOM05D001734 ORTHO05D003483 3.7e-21 105.5 124 48.4
ECA247G1446 Erigeron canadensis HOM05D001734 ORTHO05D003483 4.8e-21 105.1 124 47.6
HanXRQChr02g0036361 Helianthus annuus HOM05D001734 ORTHO05D003483 4.8e-21 105.1 124 47.6
PSO063G7150 Papaver somniferum HOM05D001734 ORTHO05D003483 4.8e-21 105.1 127 47.2
Sopen03g032020 Solanum pennellii HOM05D001734 ORTHO05D003483 8.3e-21 104.4 124 50.0
Thecc.03G012800 Theobroma cacao HOM05D001734 ORTHO05D003483 8.3e-21 104.4 125 48.8
TPR.G6034 Trifolium pratense HOM05D001734 ORTHO05D003483 8.3e-21 104.4 124 49.2
CSS0038273 Camellia sinensis var. sinensis HOM05D001734 ORTHO05D003483 1.1e-20 104.0 124 50.0
arahy.Tifrunner.gnm1.ann1.0L1HI6 Arachis hypogaea HOM05D001734 ORTHO05D003483 1.4e-20 103.6 127 48.8
CANSAT80G1574 Cannabis sativa HOM05D001734 ORTHO05D003483 1.4e-20 103.6 126 46.8
Sc04g0001800 Simmondsia chinensis HOM05D001734 ORTHO05D003483 1.8e-20 103.2 124 47.6
Glyma.04G182900 Glycine max HOM05D001734 ORTHO05D003483 2.4e-20 102.8 124 49.2
Migut.I00009 Erythranthe guttata HOM05D001734 ORTHO05D003483 4.1e-20 102.1 124 47.6
Phvul.009G178400 Phaseolus vulgaris HOM05D001734 ORTHO05D003483 4.1e-20 102.1 124 48.4
Rhsim02G0102400 Rhododendron simsii HOM05D001734 ORTHO05D003483 7.0e-20 101.3 121 47.9
arahy.Tifrunner.gnm1.ann1.2D0TBT Arachis hypogaea HOM05D001734 ORTHO05D003483 9.1e-20 100.9 127 47.2
Duzib084G0583 Durio zibethinus HOM05D001734 ORTHO05D003483 9.1e-20 100.9 124 47.6
Nitab4.5_0000785g0010 Nicotiana tabacum HOM05D001734 ORTHO05D003483 9.1e-20 100.9 124 46.8
TPR.G494 Trifolium pratense HOM05D001734 ORTHO05D003483 9.1e-20 100.9 124 48.4
Aa31LG4G16790 Aethionema arabicum HOM05D001734 ORTHO05D003483 1.6e-19 100.1 124 46.0
FAN20G1266 Fragaria x ananassa HOM05D001734 ORTHO05D003483 1.6e-19 100.1 123 48.0
VMungo1309G0781 Vigna mungo HOM05D001734 ORTHO05D003483 1.6e-19 100.1 123 48.8
Lalb_Chr08g0236501 Lupinus albus HOM05D001734 ORTHO05D003483 2.0e-19 99.8 124 48.4
SalBow5G1563 Salvia bowleyana HOM05D001734 ORTHO05D003483 2.0e-19 99.8 124 47.6
MSTRG.11455 Avicennia marina HOM05D001734 ORTHO05D003483 2.7e-19 99.4 124 47.6
Lsat_1_v5_gn_1_27061 Lactuca sativa HOM05D001734 ORTHO05D003483 2.7e-19 99.4 124 46.0
Os01g0106700 Oryza sativa ssp. japonica HOM05D001734 ORTHO05D003483 2.3e-18 96.3 124 45.2
ATR0730G152 Amborella trichopoda HOM05D001734 ORTHO05D003483 2.9e-18 95.9 127 44.9
AL5G27530 Arabidopsis lyrata HOM05D001734 ORTHO05D003483 2.9e-18 95.9 124 45.2
PGR044G0033 Punica granatum HOM05D001734 ORTHO05D003483 2.9e-18 95.9 124 46.0
SEGI_23063 Sequoiadendron giganteum HOM05D001734 ORTHO05D003483 2.9e-18 95.9 127 43.3
A06p27460 Brassica napus HOM05D001734 ORTHO05D003483 5.0e-18 95.1 124 45.2
C03p66700 Brassica napus HOM05D001734 ORTHO05D003483 5.0e-18 95.1 124 45.2
BolC3t18938H Brassica oleracea HOM05D001734 ORTHO05D003483 5.0e-18 95.1 124 45.2
BraA06t25687Z Brassica rapa HOM05D001734 ORTHO05D003483 5.0e-18 95.1 124 45.2
Sp5g13840 Schrenkiella parvula HOM05D001734 ORTHO05D003483 5.0e-18 95.1 124 43.5
THA.LOC104818218 Tarenaya hassleriana HOM05D001734 ORTHO05D003483 5.0e-18 95.1 124 43.5
BcaNung07276 Brassica carinata HOM05D001734 ORTHO05D003483 6.5e-18 94.7 124 45.2
CARHR156930 Cardamine hirsuta HOM05D001734 ORTHO05D003483 1.1e-17 94.0 124 43.5
HPP92_004868 Vanilla planifolia HOM05D001734 ORTHO05D003483 4.2e-17 92.0 126 47.6
Carub.0005s1431 Capsella rubella HOM05D001734 ORTHO05D003483 5.5e-17 91.7 124 43.5
Thhalv10010050m.g Eutrema salsugineum HOM05D001734 ORTHO05D003483 5.5e-17 91.7 124 43.5
Zm00001eb126710 Zea mays HOM05D001734 ORTHO05D003483 7.2e-17 91.3 124 42.7
unitig_0.g1442 Utricularia gibba HOM05D001734 ORTHO05D003483 2.1e-16 89.7 123 43.9
AagrBONN_evm.TU.Sc2ySwM_117.1596 Anthoceros agrestis HOM05D001734 ORTHO05D003483 8.9e-15 84.3 124 42.7
Mapoly0081s0051 Marchantia polymorpha HOM05D001734 ORTHO05D003483 5.7e-14 81.6 124 39.5
Pp3c2_23700 Physcomitrium patens HOM05D001734 ORTHO05D003483 1.7e-13 80.1 125 40.8
SGA_v2.0_scaffold990G53774 Striga asiatica HOM05D001734 ORTHO05D003483 4.1e-12 75.5 46 76.1
SMO298G0036 Selaginella moellendorffii HOM05D001734 ORTHO05D003483 1.2e-11 73.9 124 38.7
Ah.11g051590 Amaranthus hybridus HOM05D001734 ORTHO05D003483 4.5e-11 72.0 50 66.0
CDE07G1059 Ceratophyllum demersum HOM05D001734 ORTHO05D003483 8.6e-10 67.8 46 65.2


User provided reference genes

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