Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI16724 Sapria himalayana HOM05D006697 ORTHO05D008161 2.9e-154 548.5 273 100.0
Sabra16G0248400 Salix brachista HOM05D006697 ORTHO05D008161 1.7e-69 266.9 280 56.4
AUR62038532 Chenopodium quinoa HOM05D006697 ORTHO05D008161 1.0e-66 257.7 282 52.5
Potri.001G377100 Populus trichocarpa HOM05D006697 ORTHO05D008161 3.9e-66 255.8 280 54.3
AUR62013379 Chenopodium quinoa HOM05D006697 ORTHO05D008161 5.0e-66 255.4 282 52.1
TWI12G1402 Tripterygium wilfordii HOM05D006697 ORTHO05D008161 8.6e-66 254.6 287 52.6
EL10Ac1g01267 Beta vulgaris HOM05D006697 ORTHO05D008161 1.5e-65 253.8 284 51.1
Ah.05g170350 Amaranthus hybridus HOM05D006697 ORTHO05D008161 2.5e-65 253.1 281 52.7
CiPaw.04G009300 Carya illinoinensis HOM05D006697 ORTHO05D008161 4.3e-65 252.3 285 51.6
Dinv22109 Davidia involucrata HOM05D006697 ORTHO05D008161 7.3e-65 251.5 287 51.9
HanXRQChr08g0227531 Helianthus annuus HOM05D006697 ORTHO05D008161 7.3e-65 251.5 286 50.7
QL09p001838 Quercus lobata HOM05D006697 ORTHO05D008161 7.3e-65 251.5 286 52.1
Actinidia03526 Actinidia chinensis HOM05D006697 ORTHO05D008161 1.2e-64 250.8 296 51.7
Hma1.2p1_0417F.1_g148910 Hydrangea macrophylla HOM05D006697 ORTHO05D008161 2.8e-64 249.6 280 52.1
QL11p001773 Quercus lobata HOM05D006697 ORTHO05D008161 2.8e-64 249.6 286 51.4
Lj5C630T5 Lonicera japonica HOM05D006697 ORTHO05D008161 3.6e-64 249.2 281 52.0
SGA_v2.0_scaffold147G36299 Striga asiatica HOM05D006697 ORTHO05D008161 4.7e-64 248.8 264 51.5
THA.LOC104814608 Tarenaya hassleriana HOM05D006697 ORTHO05D008161 8.0e-64 248.1 279 53.4
Duzib213G0772 Durio zibethinus HOM05D006697 ORTHO05D008161 1.1e-63 247.7 281 54.1
GSVIVG01036291001 Vitis vinifera HOM05D006697 ORTHO05D008161 1.1e-63 247.7 275 53.8
Aqoxy7G01951 Aquilegia oxysepala HOM05D006697 ORTHO05D008161 2.3e-63 246.5 288 50.3
Migut.C01379 Erythranthe guttata HOM05D006697 ORTHO05D008161 6.8e-63 245.0 279 49.5
Lj7A235T22 Lonicera japonica HOM05D006697 ORTHO05D008161 2.6e-62 243.0 275 52.7
Atru.chr13.2506 Acer truncatum HOM05D006697 ORTHO05D008161 4.4e-62 242.3 282 49.6
PGR044G1078 Punica granatum HOM05D006697 ORTHO05D008161 9.8e-62 241.1 279 52.7
Atru.chr13.2494 Acer truncatum HOM05D006697 ORTHO05D008161 1.3e-61 240.7 282 49.3
Ciclev10024137m.g Citrus clementina HOM05D006697 ORTHO05D008161 1.3e-61 240.7 275 52.4
Sc23g0000070 Simmondsia chinensis HOM05D006697 ORTHO05D008161 1.3e-61 240.7 280 50.0
SGA_v2.0_scaffold24G10647 Striga asiatica HOM05D006697 ORTHO05D008161 3.7e-61 239.2 284 47.2
COL.COLO4_05203 Corchorus olitorius HOM05D006697 ORTHO05D008161 6.4e-61 238.4 281 52.0
Aa31LG2G660 Aethionema arabicum HOM05D006697 ORTHO05D008161 8.3e-61 238.0 297 49.5
TAR625G0361 Trochodendron aralioides HOM05D006697 ORTHO05D008161 9.2e-60 234.6 250 52.8
AL1G24400 Arabidopsis lyrata HOM05D006697 ORTHO05D008161 2.1e-59 233.4 288 50.0
CsaV3_2G033200 Cucumis sativus L. HOM05D006697 ORTHO05D008161 2.1e-59 233.4 278 50.7
Sed0014406 Sechium edule HOM05D006697 ORTHO05D008161 2.1e-59 233.4 279 50.9
Cpa.g.sc21.84 Carica papaya HOM05D006697 ORTHO05D008161 2.7e-59 233.0 281 49.5
Gorai.009G352800 Gossypium raimondii HOM05D006697 ORTHO05D008161 3.5e-59 232.6 277 51.3
Gohir.D05G329400 Gossypium hirsutum HOM05D006697 ORTHO05D008161 4.6e-59 232.3 277 51.3
CANSAT21G1464 Cannabis sativa HOM05D006697 ORTHO05D008161 7.8e-59 231.5 287 48.4
CANSAT21G1945 Cannabis sativa HOM05D006697 ORTHO05D008161 7.8e-59 231.5 282 49.3
PGR044G1872 Punica granatum HOM05D006697 ORTHO05D008161 7.8e-59 231.5 279 50.9
Sp1g11350 Schrenkiella parvula HOM05D006697 ORTHO05D008161 1.0e-58 231.1 288 48.6
Thecc.08G178500 Theobroma cacao HOM05D006697 ORTHO05D008161 1.0e-58 231.1 280 50.7
CARHR013100 Cardamine hirsuta HOM05D006697 ORTHO05D008161 5.1e-58 228.8 281 50.2
Thhalv10008579m.g Eutrema salsugineum HOM05D006697 ORTHO05D008161 1.5e-57 227.3 280 47.9
Sopen06g023040 Solanum pennellii HOM05D006697 ORTHO05D008161 1.5e-57 227.3 285 46.3
Haze_13956 Corylus avellana HOM05D006697 ORTHO05D008161 1.9e-57 226.9 272 52.2
PGSC0003DMG400033140 Solanum tuberosum HOM05D006697 ORTHO05D008161 1.9e-57 226.9 284 46.1
ClCG11G008450 Citrullus lanatus HOM05D006697 ORTHO05D008161 3.3e-57 226.1 278 49.6
TPR.G29429 Trifolium pratense HOM05D006697 ORTHO05D008161 3.3e-57 226.1 282 46.1
AT1G12790 Arabidopsis thaliana HOM05D006697 ORTHO05D008161 4.3e-57 225.7 290 48.3
Carub.0001s1251 Capsella rubella HOM05D006697 ORTHO05D008161 5.6e-57 225.3 288 47.9
Psat1g020920 Pisum sativum HOM05D006697 ORTHO05D008161 5.6e-57 225.3 287 44.3
Solyc06g064560.4 Solanum lycopersicum HOM05D006697 ORTHO05D008161 5.6e-57 225.3 288 46.9
Cc10_g08640 Coffea canephora HOM05D006697 ORTHO05D008161 1.2e-56 224.2 276 50.4
Ca_26167_v3 Cicer arietinum L. HOM05D006697 ORTHO05D008161 3.6e-56 222.6 279 45.9
PSO170G3180 Papaver somniferum HOM05D006697 ORTHO05D008161 3.6e-56 222.6 281 47.3
FvH4_2g00851 Fragaria vesca HOM05D006697 ORTHO05D008161 6.2e-56 221.9 280 47.5
Hund16916 Selenicereus undatus HOM05D006697 ORTHO05D008161 8.1e-56 221.5 283 49.8
MBI04_g46123_MAGBIO Magnolia biondii HOM05D006697 ORTHO05D008161 1.8e-55 220.3 285 47.0
arahy.Tifrunner.gnm1.ann1.D2QDKL Arachis hypogaea HOM05D006697 ORTHO05D008161 2.3e-55 219.9 285 46.3
Lj3g0000289 Lotus japonicus HOM05D006697 ORTHO05D008161 3.1e-55 219.5 282 45.7
VMungo1127G1290 Vigna mungo HOM05D006697 ORTHO05D008161 3.1e-55 219.5 282 45.4
arahy.Tifrunner.gnm1.ann1.6HI5DG Arachis hypogaea HOM05D006697 ORTHO05D008161 4.0e-55 219.2 285 46.3
vmacro17835 Vaccinium macrocarpon HOM05D006697 ORTHO05D008161 5.2e-55 218.8 289 49.5
arahy.Tifrunner.gnm1.ann1.L3LJ1W Arachis hypogaea HOM05D006697 ORTHO05D008161 6.8e-55 218.4 285 46.3
Glyma.11G110500 Glycine max HOM05D006697 ORTHO05D008161 6.8e-55 218.4 280 45.4
Peaxi162Scf00818g00536 Petunia axillaris HOM05D006697 ORTHO05D008161 8.9e-55 218.0 280 46.8
CAN.G14.56 Capsicum annuum HOM05D006697 ORTHO05D008161 4.4e-54 215.7 272 47.8
FAN27G1710 Fragaria x ananassa HOM05D006697 ORTHO05D008161 5.8e-54 215.3 282 46.1
MD05G1004600 Malus domestica HOM05D006697 ORTHO05D008161 5.8e-54 215.3 289 47.4
ECA247G0072 Erigeron canadensis HOM05D006697 ORTHO05D008161 2.9e-53 213.0 271 46.9
Manes.02G201500 Manihot esculenta HOM05D006697 ORTHO05D008161 2.9e-53 213.0 283 48.8
SalBow7G2072 Salvia bowleyana HOM05D006697 ORTHO05D008161 2.9e-53 213.0 337 41.2
Phvul.011G017400 Phaseolus vulgaris HOM05D006697 ORTHO05D008161 6.4e-53 211.8 282 44.0
RcHm_v2.0_Chr6g0251241 Rosa chinensis HOM05D006697 ORTHO05D008161 6.4e-53 211.8 282 46.1
Medtr2g010410 Medicago truncatula HOM05D006697 ORTHO05D008161 1.1e-52 211.1 278 44.6
vmacro14431 Vaccinium macrocarpon HOM05D006697 ORTHO05D008161 1.9e-52 210.3 319 44.8
DCAR_016528 Daucus carota HOM05D006697 ORTHO05D008161 5.4e-52 208.8 185 58.4
Os05g0588200 Oryza sativa ssp. japonica HOM05D006697 ORTHO05D008161 1.2e-51 207.6 278 46.4
Lj7C240T16 Lonicera japonica HOM05D006697 ORTHO05D008161 2.7e-51 206.5 274 47.8
A06p08910 Brassica napus HOM05D000776 ORTHO05D008161 4.6e-51 205.7 274 46.0
BraA06t24084Z Brassica rapa HOM05D000776 ORTHO05D008161 7.8e-51 204.9 274 46.4
HPP92_021490 Vanilla planifolia HOM05D006697 ORTHO05D008161 1.0e-50 204.5 275 45.8
HPP92_021529 Vanilla planifolia HOM05D006697 ORTHO05D008161 1.0e-50 204.5 275 45.8
Prupe.8G007100 Prunus persica HOM05D006697 ORTHO05D008161 1.3e-50 204.1 264 45.8
Nitab4.5_0002654g0040 Nicotiana tabacum HOM05D006697 ORTHO05D008161 3.9e-50 202.6 303 42.2
Rhsim08G0116200 Rhododendron simsii HOM05D006697 ORTHO05D008161 5.1e-50 202.2 219 55.3
FAN20G2680 Fragaria x ananassa HOM05D006697 ORTHO05D008161 5.2e-47 192.2 264 45.5
Eucgr.F04072 Eucalyptus grandis HOM05D006697 ORTHO05D008161 1.2e-46 191.0 209 54.1
Nn8g39331 Nelumbo nucifera HOM05D006697 ORTHO05D008161 1.5e-46 190.7 281 43.4
Zm00001eb345090 Zea mays HOM05D006697 ORTHO05D008161 1.5e-46 190.7 278 42.8
MD05G1003900 Malus domestica HOM05D006697 ORTHO05D008161 7.6e-46 188.3 184 57.1
BcaC05g25157 Brassica carinata HOM05D000776 ORTHO05D008161 8.4e-45 184.9 266 44.7
C05p10520 Brassica napus HOM05D000776 ORTHO05D008161 8.4e-45 184.9 266 44.7
BolC5t29798H Brassica oleracea HOM05D000776 ORTHO05D008161 1.9e-44 183.7 269 44.2
Glyma.12G014500 Glycine max HOM05D006697 ORTHO05D008161 1.6e-43 180.6 180 53.3
BcaC05g25114 Brassica carinata HOM05D006697 ORTHO05D008161 2.7e-43 179.9 267 43.8
CAN.G27.3 Capsicum annuum HOM05D006697 ORTHO05D008161 1.1e-41 174.5 210 47.6
Nitab4.5_0010319g0040 Nicotiana tabacum HOM05D006697 ORTHO05D008161 1.6e-40 170.6 292 39.4
MELO3C029791.2 Cucumis melo HOM05D006697 ORTHO05D008161 2.1e-40 170.2 213 50.2
CSS0011722 Camellia sinensis var. sinensis HOM05D006697 ORTHO05D008161 2.4e-39 166.8 268 44.0
CSS0025148 Camellia sinensis var. sinensis HOM05D006697 ORTHO05D008161 9.0e-39 164.9 268 43.7
ATR0083G058 Amborella trichopoda HOM05D006697 ORTHO05D008161 5.4e-36 155.6 206 43.2
Lsat_1_v5_gn_1_24901 Lactuca sativa HOM05D006697 ORTHO05D008161 9.3e-36 154.8 155 54.8
MSTRG.1598 Avicennia marina HOM05D006697 ORTHO05D008161 2.7e-35 153.3 171 49.7
Gohir.A05G328400 Gossypium hirsutum HOM05D006697 ORTHO05D008161 4.6e-35 152.5 149 57.7
unitig_32.g11211 Utricularia gibba HOM05D006697 ORTHO05D008161 1.9e-33 147.1 173 48.6
arahy.Tifrunner.gnm1.ann1.GZG3VH Arachis hypogaea HOM05D006697 ORTHO05D008161 4.3e-33 146.0 136 57.4
arahy.Tifrunner.gnm1.ann1.K2UT7U Arachis hypogaea HOM05D006697 ORTHO05D008161 8.1e-32 141.7 173 46.8
unitig_32.g11220 Utricularia gibba HOM05D000486 ORTHO05D000375 4.9e-29 132.5 172 44.8
arahy.Tifrunner.gnm1.ann1.9U8FPX Arachis hypogaea HOM05D006697 ORTHO05D008161 2.4e-28 130.2 260 38.5
Lalb_Chr01g0000751 Lupinus albus HOM05D006697 ORTHO05D008161 5.1e-26 122.5 137 48.9
arahy.Tifrunner.gnm1.ann1.3DZ399 Arachis hypogaea HOM05D006697 ORTHO05D008161 5.6e-25 119.0 272 33.8
AL1G24230 Arabidopsis lyrata HOM05D006697 ORTHO05D008161 2.2e-21 107.1 130 51.5
SMO119G0513 Selaginella moellendorffii HOM05D006697 ORTHO05D008161 3.8e-21 106.3 271 27.3
RcHm_v2.0_Chr6g0275321 Rosa chinensis HOM05D006697 ORTHO05D008161 2.3e-18 97.1 75 61.3
Lalb_Chr01g0000761 Lupinus albus HOM05D006697 ORTHO05D008161 1.1e-12 78.2 129 36.4
Mapoly0068s0032 Marchantia polymorpha HOM05D006697 ORTHO05D008161 8.7e-10 68.6 279 24.4
Lj7A241T18 Lonicera japonica HOM05D006697 ORTHO05D008161 1.8e-07 60.8 43 65.1
Medtr2g451120 Medicago truncatula HOM05D006697 ORTHO05D008161 4.1e-07 59.7 73 45.2


User provided reference genes

Program Settings