Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI13462 Sapria himalayana HOM05D005745 ORTHO05D006857 2.6e-228 795.0 401 100.0
Manes.01G259400 Manihot esculenta HOM05D005745 ORTHO05D006857 1.1e-69 268.1 426 45.1
Sabra14G0059300 Salix brachista HOM05D005745 ORTHO05D006857 3.7e-65 253.1 433 41.8
GSVIVG01026870001 Vitis vinifera HOM05D005745 ORTHO05D006857 3.4e-63 246.5 456 42.1
Ciclev10020429m.g Citrus clementina HOM05D005745 ORTHO05D006857 2.1e-60 237.3 411 41.4
PSO478G4474 Papaver somniferum HOM05D005745 ORTHO05D006857 4.6e-60 236.1 426 41.1
Cpa.g.sc18.234 Carica papaya HOM05D005745 ORTHO05D006857 1.0e-59 235.0 428 41.4
TAR367G0002 Trochodendron aralioides HOM05D005745 ORTHO05D006857 1.4e-59 234.6 425 39.5
PSO782G5186 Papaver somniferum HOM05D005745 ORTHO05D006857 2.3e-59 233.8 424 40.1
vmacro13297 Vaccinium macrocarpon HOM05D005745 ORTHO05D006857 6.7e-59 232.3 432 39.8
Actinidia10034 Actinidia chinensis HOM05D005745 ORTHO05D006857 8.8e-59 231.9 420 40.0
CSS0024424 Camellia sinensis var. sinensis HOM05D005745 ORTHO05D006857 8.8e-59 231.9 432 39.8
Nn6g33496 Nelumbo nucifera HOM05D005745 ORTHO05D006857 1.5e-58 231.1 434 38.7
Actinidia20926 Actinidia chinensis HOM05D005745 ORTHO05D006857 2.6e-58 230.3 431 39.2
Dinv43791 Davidia involucrata HOM05D005745 ORTHO05D006857 3.3e-58 229.9 408 38.7
TWI23G0914 Tripterygium wilfordii HOM05D005745 ORTHO05D006857 3.3e-58 229.9 466 37.6
CARHR000560 Cardamine hirsuta HOM05D005745 ORTHO05D006857 5.7e-58 229.2 425 39.5
FAN10G4182 Fragaria x ananassa HOM05D005745 ORTHO05D006857 5.7e-58 229.2 415 38.1
Hma1.2p1_0001F.1_g001520 Hydrangea macrophylla HOM05D005745 ORTHO05D006857 7.4e-58 228.8 422 37.0
FAN06G1549 Fragaria x ananassa HOM05D005745 ORTHO05D006857 9.7e-58 228.4 435 37.7
MSTRG.17255 Avicennia marina HOM05D005745 ORTHO05D006857 8.2e-57 225.3 419 39.1
CSS0038489 Camellia sinensis var. sinensis HOM05D005745 ORTHO05D006857 8.2e-57 225.3 421 40.4
FAN03G1898 Fragaria x ananassa HOM05D005745 ORTHO05D006857 1.8e-56 224.2 392 39.3
MD01G1055100 Malus domestica HOM05D005745 ORTHO05D006857 4.1e-56 223.0 430 38.4
BolC5t28819H Brassica oleracea HOM05D005745 ORTHO05D006857 6.9e-56 222.2 425 37.6
arahy.Tifrunner.gnm1.ann1.5YG8M2 Arachis hypogaea HOM05D005745 ORTHO05D006857 2.6e-55 220.3 431 37.6
A10p00280 Brassica napus HOM05D005745 ORTHO05D006857 7.7e-55 218.8 431 37.4
AL1G10580 Arabidopsis lyrata HOM05D005745 ORTHO05D006857 3.8e-54 216.5 427 37.5
Sp1g00540 Schrenkiella parvula HOM05D005745 ORTHO05D006857 3.8e-54 216.5 429 37.1
SGA_v2.0_scaffold277G46666 Striga asiatica HOM05D005745 ORTHO05D006857 5.0e-54 216.1 410 38.5
C05p00290 Brassica napus HOM05D005745 ORTHO05D006857 6.5e-54 215.7 441 37.0
BraA10t42305Z Brassica rapa HOM05D005745 ORTHO05D006857 8.5e-54 215.3 452 36.7
Potri.014G081400 Populus trichocarpa HOM05D005745 ORTHO05D006857 8.5e-54 215.3 306 44.4
Lj3g0021692 Lotus japonicus HOM05D005745 ORTHO05D006857 1.4e-53 214.5 421 38.7
BcaB03g13612 Brassica carinata HOM05D005745 ORTHO05D006857 1.9e-53 214.2 426 38.3
CsaV3_6G000430 Cucumis sativus L. HOM05D005745 ORTHO05D006857 3.2e-53 213.4 415 37.3
Thhalv10007725m.g Eutrema salsugineum HOM05D005745 ORTHO05D006857 3.2e-53 213.4 427 39.1
Medtr8g031440 Medicago truncatula HOM05D005745 ORTHO05D006857 3.2e-53 213.4 414 38.4
CAN.G1535.1 Capsicum annuum HOM05D005745 ORTHO05D006857 7.2e-53 212.2 435 37.0
Aqoxy7G00357 Aquilegia oxysepala HOM05D005745 ORTHO05D006857 1.2e-52 211.5 428 37.4
Duzib138G1514 Durio zibethinus HOM05D005745 ORTHO05D006857 1.6e-52 211.1 307 45.9
PGSC0003DMG400021653 Solanum tuberosum HOM05D005745 ORTHO05D006857 2.7e-52 210.3 426 37.3
arahy.Tifrunner.gnm1.ann1.JLYP5G Arachis hypogaea HOM05D005745 ORTHO05D006857 3.6e-52 209.9 410 38.3
Solyc05g048810.4 Solanum lycopersicum HOM05D005745 ORTHO05D006857 3.6e-52 209.9 418 36.6
Carub.0001s0045 Capsella rubella HOM05D005745 ORTHO05D006857 4.7e-52 209.5 428 39.0
DCAR_015932 Daucus carota HOM05D005745 ORTHO05D006857 4.7e-52 209.5 419 36.5
Cc02_g37770 Coffea canephora HOM05D005745 ORTHO05D006857 6.1e-52 209.1 415 37.3
Gohir.A12G105400 Gossypium hirsutum HOM05D005745 ORTHO05D006857 6.1e-52 209.1 409 36.9
Peaxi162Scf00191g01322 Petunia axillaris HOM05D005745 ORTHO05D006857 1.0e-51 208.4 435 36.3
Aa31LG1G11130 Aethionema arabicum HOM05D005745 ORTHO05D006857 1.8e-51 207.6 455 35.6
QL08p049437 Quercus lobata HOM05D005745 ORTHO05D006857 1.8e-51 207.6 429 38.5
Sopen05g028140 Solanum pennellii HOM05D005745 ORTHO05D006857 2.3e-51 207.2 427 37.5
Gorai.008G118400 Gossypium raimondii HOM05D005745 ORTHO05D006857 3.0e-51 206.8 409 37.2
AUR62033312 Chenopodium quinoa HOM05D005745 ORTHO05D006857 3.9e-51 206.5 418 36.8
Gohir.D12G109300 Gossypium hirsutum HOM05D005745 ORTHO05D006857 3.9e-51 206.5 411 36.7
VMungo0331G1900 Vigna mungo HOM05D005745 ORTHO05D006857 3.9e-51 206.5 412 38.1
Nitab4.5_0007346g0010 Nicotiana tabacum HOM05D005745 ORTHO05D006857 5.2e-51 206.1 445 35.7
Lsat_1_v5_gn_7_5060 Lactuca sativa HOM05D005745 ORTHO05D006857 1.5e-50 204.5 426 37.3
Prupe.2G164800 Prunus persica HOM05D005745 ORTHO05D006857 1.5e-50 204.5 294 45.6
AUR62033347 Chenopodium quinoa HOM05D005745 ORTHO05D006857 2.0e-50 204.1 419 37.0
Hund27291 Selenicereus undatus HOM05D005745 ORTHO05D006857 3.3e-50 203.4 443 35.7
EL10Ac1g00543 Beta vulgaris HOM05D005745 ORTHO05D006857 7.4e-50 202.2 425 36.0
CiPaw.02G029400 Carya illinoinensis HOM05D005745 ORTHO05D006857 7.4e-50 202.2 414 37.2
Rhsim07G0017300 Rhododendron simsii HOM05D000683 ORTHO05D000507 7.4e-50 202.2 296 46.6
Lalb_Chr10g0097191 Lupinus albus HOM05D005745 ORTHO05D006857 1.7e-49 201.1 419 36.8
Lalb_Chr04g0256771 Lupinus albus HOM05D005745 ORTHO05D006857 2.2e-49 200.7 416 36.8
CANSAT56G0536 Cannabis sativa HOM05D005745 ORTHO05D006857 3.7e-49 199.9 418 34.9
CiPaw.02G029100 Carya illinoinensis HOM05D005745 ORTHO05D006857 6.3e-49 199.1 420 38.1
Sc26g0000960 Simmondsia chinensis HOM05D005745 ORTHO05D006857 6.3e-49 199.1 427 36.8
AT1G01760 Arabidopsis thaliana HOM05D005745 ORTHO05D006857 2.4e-48 197.2 310 43.5
Lj7C516G5 Lonicera japonica HOM05D005745 ORTHO05D006857 7.0e-48 195.7 294 44.2
ECA236G3051 Erigeron canadensis HOM05D005745 ORTHO05D006857 1.6e-47 194.5 423 37.6
Nitab4.5_0002262g0010 Nicotiana tabacum HOM05D005745 ORTHO05D006857 2.0e-47 194.1 417 36.5
Cfa003949 Carpinus fangiana HOM05D000683 ORTHO05D000507 5.9e-47 192.6 293 43.3
Eucgr.E00169 Eucalyptus grandis HOM05D005745 ORTHO05D006857 7.7e-47 192.2 423 35.5
PGR042G0923 Punica granatum HOM05D005745 ORTHO05D006857 7.7e-47 192.2 448 34.8
THA.LOC104817020 Tarenaya hassleriana HOM05D005745 ORTHO05D006857 2.2e-46 190.7 299 41.8
Glyma.07G073300 Glycine max HOM05D005745 ORTHO05D006857 6.5e-46 189.1 304 42.1
Eucgr.E00173 Eucalyptus grandis HOM05D005745 ORTHO05D006857 3.2e-45 186.8 425 35.1
Oeu056358.1 Olea europaea HOM05D005745 ORTHO05D006857 7.2e-45 185.7 300 41.7
Sed0009525 Sechium edule HOM05D005745 ORTHO05D006857 9.4e-45 185.3 300 40.7
ClCG06G003860 Citrullus lanatus HOM05D005745 ORTHO05D006857 3.6e-44 183.3 283 42.8
AUR62004330 Chenopodium quinoa HOM05D005745 ORTHO05D006857 1.0e-43 181.8 425 33.9
Ah.05g176680 Amaranthus hybridus HOM05D005745 ORTHO05D006857 8.8e-43 178.7 289 43.3
Haze_15472 Corylus avellana HOM05D005745 ORTHO05D006857 8.8e-43 178.7 440 35.2
FAN06G0933 Fragaria x ananassa HOM05D005745 ORTHO05D006857 1.5e-42 177.9 311 40.2
Thecc.01G362500 Theobroma cacao HOM05D005745 ORTHO05D006857 3.3e-42 176.8 167 55.7
HanXRQChr04g0121611 Helianthus annuus HOM05D005745 ORTHO05D006857 1.3e-41 174.9 296 41.9
HPP92_001499 Vanilla planifolia HOM05D005745 ORTHO05D006857 2.4e-40 170.6 419 34.1
CiPaw.02G029200 Carya illinoinensis HOM05D005745 ORTHO05D006857 1.3e-38 164.9 300 39.7
MBI17_g21972_MAGBIO Magnolia biondii HOM05D005745 ORTHO05D006857 1.3e-38 164.9 397 34.5
Prupe.2G165000 Prunus persica HOM05D005745 ORTHO05D006857 5.0e-38 162.9 383 35.0
Oeu056357.1 Olea europaea HOM05D005745 ORTHO05D006857 1.2e-36 158.3 211 43.1
TPR.G4413 Trifolium pratense HOM05D005745 ORTHO05D006857 2.7e-36 157.1 154 57.1
Ca_23656_v3 Cicer arietinum L. HOM05D005745 ORTHO05D006857 3.0e-35 153.7 365 35.9
RcHm_v2.0_Chr1g0354081 Rosa chinensis HOM05D005745 ORTHO05D006857 2.0e-34 151.0 444 31.8
Zm00001eb067600 Zea mays HOM05D005745 ORTHO05D006857 4.4e-34 149.8 431 31.6
Atru.BG.56.p Acer truncatum HOM05D005745 ORTHO05D006857 3.5e-31 140.2 280 37.1
Os04g0683500 Oryza sativa ssp. japonica HOM05D005745 ORTHO05D006857 1.3e-30 138.3 290 37.2
MBI18_g01486_MAGBIO Magnolia biondii HOM05D005745 ORTHO05D006857 2.3e-30 137.5 411 31.1
Mapoly0023s0060 Marchantia polymorpha HOM05D005745 ORTHO05D006857 5.0e-30 136.3 151 48.3
Pp3c4_14060 Physcomitrium patens HOM05D005745 ORTHO05D006857 1.1e-29 135.2 163 46.0
Glyma.03G013550 Glycine max HOM05D005745 ORTHO05D006857 1.5e-29 134.8 103 64.1
CDE06G1611 Ceratophyllum demersum HOM05D005745 ORTHO05D006857 2.1e-28 131.0 402 29.1
MELO3C021221.2 Cucumis melo HOM05D005745 ORTHO05D006857 6.1e-28 129.4 83 74.7
Gohir.A12G105450 Gossypium hirsutum HOM05D005745 ORTHO05D006857 4.0e-27 126.7 348 32.8
EL10Ac7g17708 Beta vulgaris HOM05D005745 ORTHO05D006857 6.3e-25 119.4 84 69.0
FAN01G0854 Fragaria x ananassa HOM05D005745 ORTHO05D006857 8.3e-25 119.0 136 49.3
Oeu056356.1 Olea europaea HOM05D005745 ORTHO05D006857 1.1e-24 118.6 81 66.7
SEGI_32349 Sequoiadendron giganteum HOM05D005745 ORTHO05D006857 1.2e-23 115.2 85 60.0
FvH4_7g13861 Fragaria vesca HOM05D005745 ORTHO05D006857 1.0e-22 112.1 340 30.9
AagrBONN_evm.TU.Sc2ySwM_362.160 Anthoceros agrestis HOM05D005745 ORTHO05D006857 4.3e-21 106.7 354 28.5
MD07G1140200 Malus domestica HOM05D005745 ORTHO05D006857 1.6e-20 104.8 308 32.5
CBR_g12518 Chara braunii HOM05D004914 ORTHO05D006512 1.0e-19 102.1 104 51.9
MCO02G004 Micromonas commoda HOM05D005745 ORTHO05D006857 2.2e-17 94.4 155 34.8
Cre14.g629283 Chlamydomonas reinhardtii HOM05D005745 ORTHO05D006857 3.0e-14 84.0 103 46.6
TPR.G39633 Trifolium pratense HOM05D005745 ORTHO05D006857 2.5e-13 80.9 185 36.2
Psat4g154320 Pisum sativum HOM05D005745 ORTHO05D006857 3.3e-13 80.5 185 35.7
Glyma.03G013600 Glycine max HOM05D005745 ORTHO05D006857 1.8e-11 74.7 185 32.4
Phvul.010G096200 Phaseolus vulgaris HOM05D005745 ORTHO05D006857 5.8e-10 69.7 185 31.9
ATR0594G105 Amborella trichopoda HOM05D005745 ORTHO05D006857 1.3e-09 68.6 195 31.3
PRCOL_00000230 Prasinoderma coloniale HOM05D005745 ORTHO05D006857 3.2e-08 63.9 122 33.6
unitig_26.g9734 Utricularia gibba HOM05D005745 ORTHO05D006857 7.8e-07 59.3 39 66.7
Atru.chr5.475 Acer truncatum HOM05D005745 ORTHO05D006857 2.3e-06 57.8 59 57.6
Zm00001eb420790 Zea mays HOM05D005745 ORTHO05D006857 3.9e-06 57.0 190 28.9
Prupe.2G164500 Prunus persica HOM05D005745 ORTHO05D006857 8.6e-06 55.8 154 35.1


User provided reference genes

Program Settings