Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI13401 Sapria himalayana HOM05D004707 ORTHO05D005837 4.7e-302 1040.4 530 100.0
Manes.01G254000 Manihot esculenta HOM05D004707 ORTHO05D005837 6.7e-123 445.3 562 47.2
Potri.014G088200 Populus trichocarpa HOM05D004707 ORTHO05D005837 8.7e-123 444.9 566 47.0
THA.LOC104825856 Tarenaya hassleriana HOM05D004707 ORTHO05D005837 1.5e-122 444.1 434 54.4
Thecc.01G355200 Theobroma cacao HOM05D004707 ORTHO05D005837 3.3e-122 443.0 440 52.3
TAR375G0400 Trochodendron aralioides HOM05D004707 ORTHO05D005837 4.3e-122 442.6 459 52.3
COL.COLO4_12751 Corchorus olitorius HOM05D004707 ORTHO05D005837 1.8e-120 437.2 438 52.1
Eucgr.D02313 Eucalyptus grandis HOM05D004707 ORTHO05D005837 2.6e-119 433.3 521 48.0
Prupe.2G174600 Prunus persica HOM05D004707 ORTHO05D005837 3.4e-119 433.0 433 53.8
Haze_15544 Corylus avellana HOM05D004707 ORTHO05D005837 5.8e-119 432.2 571 44.8
Dinv43847 Davidia involucrata HOM05D004707 ORTHO05D005837 2.9e-118 429.9 466 52.8
Sp6g00340 Schrenkiella parvula HOM05D004707 ORTHO05D005837 2.9e-118 429.9 550 46.7
Potri.002G162100 Populus trichocarpa HOM05D004707 ORTHO05D005837 1.1e-117 427.9 434 53.9
Gorai.004G041800 Gossypium raimondii HOM05D004707 ORTHO05D005837 1.4e-117 427.6 434 53.0
Gohir.A08G032300 Gossypium hirsutum HOM05D004707 ORTHO05D005837 4.2e-117 426.0 432 51.4
Gorai.008G120200 Gossypium raimondii HOM05D004707 ORTHO05D005837 4.2e-117 426.0 441 52.2
AT4G00290 Arabidopsis thaliana HOM05D004707 ORTHO05D005837 5.5e-117 425.6 512 47.3
Ciclev10028150m.g Citrus clementina HOM05D004707 ORTHO05D005837 5.5e-117 425.6 457 51.0
CiPaw.01G064900 Carya illinoinensis HOM05D004707 ORTHO05D005837 1.2e-116 424.5 512 47.3
AL6G53230 Arabidopsis lyrata HOM05D004707 ORTHO05D005837 2.1e-116 423.7 446 51.1
CARHR248350 Cardamine hirsuta HOM05D004707 ORTHO05D005837 2.1e-116 423.7 449 51.9
Oeu015224.1 Olea europaea HOM05D004707 ORTHO05D005837 2.7e-116 423.3 538 45.9
Gohir.D12G111000 Gossypium hirsutum HOM05D004707 ORTHO05D005837 3.5e-116 422.9 441 51.9
CANSAT56G0368 Cannabis sativa HOM05D004707 ORTHO05D005837 1.3e-115 421.0 451 51.7
FAN10G2784 Fragaria x ananassa HOM05D004707 ORTHO05D005837 3.9e-115 419.5 493 49.7
Sed0023991 Sechium edule HOM05D004707 ORTHO05D005837 3.9e-115 419.5 563 44.4
FAN03G0218 Fragaria x ananassa HOM05D004707 ORTHO05D005837 5.1e-115 419.1 519 48.4
CSS0041396 Camellia sinensis var. sinensis HOM05D004707 ORTHO05D005837 6.7e-115 418.7 435 52.0
A02p24040 Brassica napus HOM05D000315 ORTHO05D000527 1.1e-114 417.9 419 52.5
FvH4_7g15010 Fragaria vesca HOM05D004707 ORTHO05D005837 1.1e-114 417.9 567 45.7
FAN10G1283 Fragaria x ananassa HOM05D004707 ORTHO05D005837 1.1e-114 417.9 493 49.3
C02p37880 Brassica napus HOM05D000315 ORTHO05D000527 1.5e-114 417.5 419 52.5
FAN06G2758 Fragaria x ananassa HOM05D004707 ORTHO05D005837 1.5e-114 417.5 436 52.1
Actinidia18541 Actinidia chinensis HOM05D004707 ORTHO05D005837 1.9e-114 417.2 460 50.2
BcaC03g16035 Brassica carinata HOM05D004707 ORTHO05D005837 4.3e-114 416.0 419 52.3
PGR031G2856 Punica granatum HOM05D004707 ORTHO05D005837 4.3e-114 416.0 471 49.7
Lj9C587T4 Lonicera japonica HOM05D004707 ORTHO05D005837 5.7e-114 415.6 416 53.1
BraA02t07399Z Brassica rapa HOM05D000315 ORTHO05D000527 7.4e-114 415.2 527 45.4
FAN01G2554 Fragaria x ananassa HOM05D004707 ORTHO05D005837 7.4e-114 415.2 436 51.8
Aa31LG5G670 Aethionema arabicum HOM05D004707 ORTHO05D005837 1.3e-113 414.5 449 51.7
Sc06g0007250 Simmondsia chinensis HOM05D004707 ORTHO05D005837 1.6e-113 414.1 456 50.7
RcHm_v2.0_Chr1g0357041 Rosa chinensis HOM05D004707 ORTHO05D005837 2.2e-113 413.7 489 49.3
TWI59G0961 Tripterygium wilfordii HOM05D004707 ORTHO05D005837 2.2e-113 413.7 459 49.5
Rhsim01G0164800 Rhododendron simsii HOM05D004707 ORTHO05D005837 4.8e-113 412.5 491 49.5
BolC2t09805H Brassica oleracea HOM05D004707 ORTHO05D005837 1.1e-112 411.4 525 46.1
MELO3C006094.2 Cucumis melo HOM05D004707 ORTHO05D005837 1.4e-112 411.0 459 48.6
BcaB01g02199 Brassica carinata HOM05D004707 ORTHO05D005837 3.1e-112 409.8 456 50.0
PSO063G6595 Papaver somniferum HOM05D004707 ORTHO05D005837 3.1e-112 409.8 454 48.9
CsaV3_3G008770 Cucumis sativus L. HOM05D004707 ORTHO05D005837 1.2e-111 407.9 457 48.4
vmacro20909 Vaccinium macrocarpon HOM05D004707 ORTHO05D005837 1.5e-111 407.5 460 51.1
Carub.0006s3698 Capsella rubella HOM05D004707 ORTHO05D005837 2.0e-111 407.1 518 46.5
FAN06G3707 Fragaria x ananassa HOM05D004707 ORTHO05D005837 2.6e-111 406.8 486 49.0
Glyma.16G033400 Glycine max HOM05D004707 ORTHO05D005837 2.6e-111 406.8 467 49.0
Lj3g0007734 Lotus japonicus HOM05D004707 ORTHO05D005837 3.4e-111 406.4 463 49.0
Sopen10g005800 Solanum pennellii HOM05D004707 ORTHO05D005837 3.4e-111 406.4 474 47.9
Cc00_g17840 Coffea canephora HOM05D004707 ORTHO05D005837 7.6e-111 405.2 443 51.2
Glyma.07G067400 Glycine max HOM05D004707 ORTHO05D005837 1.3e-110 404.4 477 47.4
Solyc10g012060.3 Solanum lycopersicum HOM05D004707 ORTHO05D005837 1.3e-110 404.4 474 47.5
CAN.G91.14 Capsicum annuum HOM05D004707 ORTHO05D005837 2.9e-110 403.3 465 47.7
Lalb_Chr04g0259171 Lupinus albus HOM05D004707 ORTHO05D005837 5.0e-110 402.5 459 48.1
Nitab4.5_0000690g0060 Nicotiana tabacum HOM05D004707 ORTHO05D005837 1.1e-109 401.4 473 47.8
Peaxi162Scf00585g00318 Petunia axillaris HOM05D004707 ORTHO05D005837 1.4e-109 401.0 439 49.4
Ah.05g180290 Amaranthus hybridus HOM05D004707 ORTHO05D005837 1.6e-108 397.5 484 45.9
Ca_23597_v3 Cicer arietinum L. HOM05D004707 ORTHO05D005837 1.0e-107 394.8 479 46.8
Phvul.010G102400 Phaseolus vulgaris HOM05D004707 ORTHO05D005837 1.3e-107 394.4 433 48.0
arahy.Tifrunner.gnm1.ann1.YM6R3T Arachis hypogaea HOM05D004707 ORTHO05D005837 2.3e-107 393.7 448 48.4
EL10Ac1g00374 Beta vulgaris HOM05D004707 ORTHO05D005837 2.3e-107 393.7 507 44.6
arahy.Tifrunner.gnm1.ann1.HL3201 Arachis hypogaea HOM05D004707 ORTHO05D005837 3.9e-107 392.9 460 47.6
Thhalv10028609m.g Eutrema salsugineum HOM05D004707 ORTHO05D005837 3.9e-107 392.9 414 51.9
Lsat_1_v5_gn_4_43000 Lactuca sativa HOM05D004707 ORTHO05D005837 3.9e-107 392.9 466 47.0
GSVIVG01026989001 Vitis vinifera HOM05D004707 ORTHO05D005837 1.5e-106 391.0 418 51.0
Aqoxy5G00593 Aquilegia oxysepala HOM05D004707 ORTHO05D005837 4.3e-106 389.4 448 46.4
VMungo0331G0696 Vigna mungo HOM05D004707 ORTHO05D005837 5.7e-106 389.0 534 43.6
DCAR_008625 Daucus carota HOM05D001113 ORTHO05D000968 9.7e-106 388.3 454 48.9
HPP92_025632 Vanilla planifolia HOM05D004707 ORTHO05D005837 1.2e-103 381.3 409 50.1
Sopen10g005790 Solanum pennellii HOM05D004707 ORTHO05D005837 2.6e-103 380.2 467 46.0
Medtr8g028760 Medicago truncatula HOM05D004707 ORTHO05D005837 4.5e-103 379.4 465 46.0
Gohir.D08G043200 Gossypium hirsutum HOM05D004707 ORTHO05D005837 3.8e-102 376.3 406 51.2
unitig_749.g14344 Utricularia gibba HOM05D004707 ORTHO05D006649 8.5e-102 375.2 439 47.2
Hund16663 Selenicereus undatus HOM05D004707 ORTHO05D005837 3.2e-101 373.2 453 47.2
ECA234G0026 Erigeron canadensis HOM05D004707 ORTHO05D005837 9.4e-101 371.7 448 48.4
Nn6g33309 Nelumbo nucifera HOM05D004707 ORTHO05D005837 9.4e-101 371.7 459 45.1
ATR0661G226 Amborella trichopoda HOM05D004707 ORTHO05D005837 1.6e-100 370.9 434 44.9
Gohir.A12G107750 Gossypium hirsutum HOM05D004707 ORTHO05D005837 3.9e-99 366.3 432 47.5
Lalb_Chr17g0339181 Lupinus albus HOM05D004707 ORTHO05D005837 6.7e-99 365.5 378 50.8
HanXRQChr16g0520681 Helianthus annuus HOM05D004707 ORTHO05D005837 5.7e-98 362.5 442 47.7
vmacro13252 Vaccinium macrocarpon HOM05D004707 ORTHO05D005837 9.1e-96 355.1 459 44.7
ClCG05G001380 Citrullus lanatus HOM05D004707 ORTHO05D005837 1.2e-95 354.8 459 43.8
Solyc10g012050.3 Solanum lycopersicum HOM05D004707 ORTHO05D005837 1.2e-95 354.8 419 46.8
Zm00001eb073200 Zea mays HOM05D004707 ORTHO05D005837 1.1e-93 348.2 502 40.8
AUR62004395 Chenopodium quinoa HOM05D004707 ORTHO05D005837 1.9e-93 347.4 467 43.7
AUR62022601 Chenopodium quinoa HOM05D004707 ORTHO05D005837 1.8e-91 340.9 440 43.9
unitig_26.g9294 Utricularia gibba HOM05D004707 ORTHO05D005837 2.3e-91 340.5 469 42.9
Os04g0578700 Oryza sativa ssp. japonica HOM05D004707 ORTHO05D005837 7.4e-90 335.5 515 40.2
SGA_v2.0_scaffold95G28817 Striga asiatica HOM05D004707 ORTHO05D005837 3.2e-85 320.1 500 38.8
Os02g0681000 Oryza sativa ssp. japonica HOM05D004707 ORTHO05D005837 1.8e-83 314.3 429 42.9
Peaxi162Scf00020g01222 Petunia axillaris HOM05D004707 ORTHO05D005837 2.6e-82 310.5 455 40.2
vmacro20907 Vaccinium macrocarpon HOM05D004707 ORTHO05D005837 1.8e-80 304.3 388 45.1
Atru.chr5.540 Acer truncatum HOM05D004707 ORTHO05D005837 5.3e-80 302.8 367 48.5
Migut.B01788 Erythranthe guttata HOM05D004707 ORTHO05D005837 5.3e-80 302.8 528 36.6
Rhsim07G0012400 Rhododendron simsii HOM05D004707 ORTHO05D005837 3.5e-79 300.1 462 40.9
Pp3c10_20950 Physcomitrium patens HOM05D004707 ORTHO05D005837 2.1e-76 290.8 366 43.2
Cpa.g.sc11.45 Carica papaya HOM05D004707 ORTHO05D005837 4.7e-76 289.7 377 45.6
SMO116G0175 Selaginella moellendorffii HOM05D004707 ORTHO05D005837 8.0e-76 288.9 370 41.6
Psat4g156520 Pisum sativum HOM05D004707 ORTHO05D005837 1.5e-74 284.6 369 46.3
Mapoly0001s0022 Marchantia polymorpha HOM05D004707 ORTHO05D005837 2.2e-73 280.8 438 37.0
TPR.G14976 Trifolium pratense HOM05D004707 ORTHO05D005837 2.9e-70 270.4 456 40.4
Pp3c14_810 Physcomitrium patens HOM05D004707 ORTHO05D005837 2.8e-60 237.3 335 40.6
Pp3c15_19020 Physcomitrium patens HOM05D004707 ORTHO05D005837 2.8e-60 237.3 367 37.3
CDE04G1515 Ceratophyllum demersum HOM05D004707 ORTHO05D005837 4.4e-58 229.9 181 61.9
Pp3c9_20150 Physcomitrium patens HOM05D004707 ORTHO05D005837 9.8e-58 228.8 366 36.9
AT4G00234 Arabidopsis thaliana HOM05D004707 ORTHO05D005837 2.1e-52 211.1 242 46.7
MD01G1068400 Malus domestica HOM05D004707 ORTHO05D005837 1.4e-51 208.4 268 46.3
Nitab4.5_0000200g0180 Nicotiana tabacum HOM05D004707 ORTHO05D005837 1.4e-51 208.4 268 45.5
SEGI_13365 Sequoiadendron giganteum HOM05D004707 ORTHO05D005837 1.9e-45 188.0 230 43.5
Atru.ctg942.22 Acer truncatum HOM05D004707 ORTHO05D005837 1.2e-44 185.3 272 40.1
AagrBONN_evm.TU.Sc2ySwM_344.1481 Anthoceros agrestis HOM05D004707 ORTHO05D005837 1.6e-36 158.3 305 34.4
Pp3c9_20120 Physcomitrium patens HOM05D004707 ORTHO05D005837 1.9e-29 134.8 187 40.1
Lsat_1_v5_gn_4_48081 Lactuca sativa HOM05D004707 ORTHO05D005837 1.1e-27 129.0 155 43.2
Mapoly0003s0092 Marchantia polymorpha HOM05D004707 ORTHO05D005837 6.9e-27 126.3 351 24.2
Hma1.2p1_0071F.1_g037910 Hydrangea macrophylla HOM05D004707 ORTHO05D005837 2.0e-26 124.8 99 55.6
Rhsim07G0181500 Rhododendron simsii HOM05D004707 ORTHO05D005837 1.7e-25 121.7 428 26.6
SMO361G0110 Selaginella moellendorffii HOM05D004707 ORTHO05D005837 8.4e-25 119.4 342 25.4
Rhsim05G0008500 Rhododendron simsii HOM05D004707 ORTHO05D005837 1.1e-24 119.0 237 33.3
Rhsim05G0021600 Rhododendron simsii HOM05D004707 ORTHO05D005837 3.2e-24 117.5 227 33.5
Cpa.g.sc11.48 Carica papaya HOM05D004707 ORTHO05D005837 1.6e-23 115.2 90 56.7
SEGI_23190 Sequoiadendron giganteum HOM05D004707 ORTHO05D005837 5.1e-22 110.2 103 47.6
Lsat_1_v5_gn_4_48041 Lactuca sativa HOM05D004707 ORTHO05D005837 2.5e-21 107.8 178 37.6
Pp3c3_12760 Physcomitrium patens HOM05D004707 ORTHO05D005837 5.6e-21 106.7 349 24.6
Migut.B01028 Erythranthe guttata HOM05D004707 ORTHO05D005837 8.1e-20 102.8 144 39.6
SEGI_38275 Sequoiadendron giganteum HOM05D004707 ORTHO05D005837 4.0e-19 100.5 84 61.9
Pp3c13_20730 Physcomitrium patens HOM05D004707 ORTHO05D005837 3.8e-17 94.0 311 24.1
MBI09_g26550_MAGBIO Magnolia biondii HOM05D004707 ORTHO05D005837 1.4e-16 92.0 93 47.3
Migut.B01027 Erythranthe guttata HOM05D004707 ORTHO05D005837 7.1e-16 89.7 154 35.1
HanXRQChr11g0349701 Helianthus annuus HOM05D004707 ORTHO05D005837 8.7e-14 82.8 86 46.5
HanXRQChr17g0534491 Helianthus annuus HOM05D004707 ORTHO05D005837 8.7e-14 82.8 86 46.5
HanXRQChr09g0268301 Helianthus annuus HOM05D004707 ORTHO05D005837 2.5e-13 81.3 88 44.3
Cre01.g035750 Chlamydomonas reinhardtii HOM05D004707 ORTHO05D005837 5.3e-11 73.6 233 23.6
Aqoxy5G00594 Aquilegia oxysepala HOM05D001987 ORTHO05D004018 9.9e-10 69.3 70 52.9
Atru.chr12.711 Acer truncatum HOM05D004707 ORTHO05D005837 1.3e-09 68.9 190 27.4
TAR626G0135 Trochodendron aralioides HOM05D004707 ORTHO05D005837 1.3e-09 68.9 66 50.0
MCO04G456 Micromonas commoda HOM05D002409 ORTHO05D002557 4.9e-09 67.0 369 22.0
Cre01.g035600 Chlamydomonas reinhardtii HOM05D004707 ORTHO05D005837 4.2e-08 63.9 175 26.9
PRCOL_00003228 Prasinoderma coloniale HOM05D002409 ORTHO05D002557 6.0e-07 60.1 293 20.5
Medtr8g030960 Medicago truncatula HOM05D004707 ORTHO05D005837 7.9e-07 59.7 108 33.3
MBI01_g45834_MAGBIO Magnolia biondii HOM05D004707 ORTHO05D005837 1.8e-06 58.5 60 58.3
Lsat_1_v5_gn_4_49101 Lactuca sativa HOM05D004707 ORTHO05D005837 3.0e-06 57.8 130 27.7
MCO12G417 Micromonas commoda HOM05D004707 ORTHO05D005837 3.0e-06 57.8 224 23.2
MBI18_g40888_MAGBIO Magnolia biondii HOM05D004707 ORTHO05D005837 3.9e-06 57.4 60 56.7


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