Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI11732 Sapria himalayana HOM05D000392 ORTHO05D002065 4.8e-38 160.6 78 100.0
SHI00385 Sapria himalayana HOM05D000392 ORTHO05D002065 6.1e-25 117.1 71 76.1
ECA233G3654 Erigeron canadensis HOM05D000392 ORTHO05D002065 1.0e-24 116.3 71 73.2
Rhsim07G0041900 Rhododendron simsii HOM05D000002 ORTHO05D002065 4.0e-24 114.4 72 72.2
Sopen04g029040 Solanum pennellii HOM05D000002 ORTHO05D002065 6.8e-24 113.6 69 73.9
Sopen06g028770 Solanum pennellii HOM05D000002 ORTHO05D002065 6.8e-24 113.6 69 73.9
Sopen10g028630 Solanum pennellii HOM05D000002 ORTHO05D002065 6.8e-24 113.6 69 73.9
Sopen12g020570 Solanum pennellii HOM05D000002 ORTHO05D002065 6.8e-24 113.6 69 73.9
Sopen12g028980 Solanum pennellii HOM05D000002 ORTHO05D002065 6.8e-24 113.6 69 73.9
Sopen01g006130 Solanum pennellii HOM05D000002 ORTHO05D002065 2.6e-23 111.7 73 67.1
Sopen01g019060 Solanum pennellii HOM05D000002 ORTHO05D002065 2.6e-23 111.7 73 67.1
Sopen01g024170 Solanum pennellii HOM05D000002 ORTHO05D002065 2.6e-23 111.7 73 67.1
Sopen01g026840 Solanum pennellii HOM05D000002 ORTHO05D002065 2.6e-23 111.7 73 67.1
Sopen01g036580 Solanum pennellii HOM05D000002 ORTHO05D002065 2.6e-23 111.7 69 72.5
Sopen02g013820 Solanum pennellii HOM05D000002 ORTHO05D002065 2.6e-23 111.7 69 72.5
Sopen03g006780 Solanum pennellii HOM05D000002 ORTHO05D002065 2.6e-23 111.7 69 72.5
Sopen03g026840 Solanum pennellii HOM05D000002 ORTHO05D002065 2.6e-23 111.7 73 67.1
Sopen03g030560 Solanum pennellii HOM05D000002 ORTHO05D002065 2.6e-23 111.7 69 72.5
Sopen04g024530 Solanum pennellii HOM05D000002 ORTHO05D002065 2.6e-23 111.7 73 67.1
Sopen05g021470 Solanum pennellii HOM05D000002 ORTHO05D002065 2.6e-23 111.7 73 67.1
Sopen05g026510 Solanum pennellii HOM05D000002 ORTHO05D002065 2.6e-23 111.7 73 67.1
Sopen06g014830 Solanum pennellii HOM05D000002 ORTHO05D002065 2.6e-23 111.7 73 67.1
Sopen06g018660 Solanum pennellii HOM05D000392 ORTHO05D002065 2.6e-23 111.7 69 72.5
Sopen07g005570 Solanum pennellii HOM05D000002 ORTHO05D002065 2.6e-23 111.7 73 67.1
Sopen08g025440 Solanum pennellii HOM05D000002 ORTHO05D002065 2.6e-23 111.7 73 67.1
Sopen09g024720 Solanum pennellii HOM05D000392 ORTHO05D002065 2.6e-23 111.7 73 67.1
Sopen10g024560 Solanum pennellii HOM05D000002 ORTHO05D002065 2.6e-23 111.7 69 72.5
Sopen11g008810 Solanum pennellii HOM05D000002 ORTHO05D002065 2.6e-23 111.7 69 72.5
Sopen11g025130 Solanum pennellii HOM05D000002 ORTHO05D002065 2.6e-23 111.7 73 67.1
Sopen12g021410 Solanum pennellii HOM05D000002 ORTHO05D002065 2.6e-23 111.7 73 67.1
Sopen12g021690 Solanum pennellii HOM05D000002 ORTHO05D002065 2.6e-23 111.7 73 67.1
Sopen12g022710 Solanum pennellii HOM05D000002 ORTHO05D002065 2.6e-23 111.7 73 67.1
Sopen05g029240 Solanum pennellii HOM05D000392 ORTHO05D002065 3.4e-23 111.3 69 69.6
Rhsim01G0238600 Rhododendron simsii HOM05D000002 ORTHO05D002065 5.7e-23 110.5 68 72.1
Sopen03g010500 Solanum pennellii HOM05D000002 ORTHO05D002065 5.7e-23 110.5 68 72.1
Sopen07g029130 Solanum pennellii HOM05D000002 ORTHO05D002065 5.7e-23 110.5 69 71.0
Sopen11g010460 Solanum pennellii HOM05D000002 ORTHO05D002065 5.7e-23 110.5 73 65.8
Sopen11g024270 Solanum pennellii HOM05D000002 ORTHO05D002065 7.5e-23 110.2 73 65.8
Sopen02g016360 Solanum pennellii HOM05D000002 ORTHO05D002065 1.7e-22 109.0 73 64.4
Sopen03g018110 Solanum pennellii HOM05D000002 ORTHO05D002065 1.7e-22 109.0 69 71.0
Sopen07g024680 Solanum pennellii HOM05D000002 ORTHO05D002065 1.7e-22 109.0 73 64.4
Rhsim03G0114900 Rhododendron simsii HOM05D000002 ORTHO05D002065 2.2e-22 108.6 68 72.1
Sopen04g013080 Solanum pennellii HOM05D000002 ORTHO05D002065 2.2e-22 108.6 69 71.0
Sopen04g006270 Solanum pennellii HOM05D000392 ORTHO05D000610 2.8e-22 108.2 76 67.1
Sopen05g028270 Solanum pennellii HOM05D000002 ORTHO05D002065 2.8e-22 108.2 73 64.4
Sopen08g005930 Solanum pennellii HOM05D000002 ORTHO05D002065 2.8e-22 108.2 73 64.4
Sopen08g008670 Solanum pennellii HOM05D000002 ORTHO05D002065 2.8e-22 108.2 76 67.1
Sopen09g029440 Solanum pennellii HOM05D000002 ORTHO05D002065 2.8e-22 108.2 73 65.8
Sopen11g017220 Solanum pennellii HOM05D000002 ORTHO05D002065 2.8e-22 108.2 72 65.3
Sopen01g005920 Solanum pennellii HOM05D000392 ORTHO05D002065 3.7e-22 107.8 69 69.6
Sopen02g003080 Solanum pennellii HOM05D000002 ORTHO05D002065 3.7e-22 107.8 69 69.6
Sopen02g010090 Solanum pennellii HOM05D000002 ORTHO05D002065 3.7e-22 107.8 69 69.6
Sopen02g017660 Solanum pennellii HOM05D000392 ORTHO05D002065 3.7e-22 107.8 69 69.6
Sopen02g030500 Solanum pennellii HOM05D000392 ORTHO05D002065 3.7e-22 107.8 69 69.6
Sopen03g036760 Solanum pennellii HOM05D000392 ORTHO05D002065 3.7e-22 107.8 69 69.6
Sopen04g018150 Solanum pennellii HOM05D000006 ORTHO05D002065 3.7e-22 107.8 69 69.6
Sopen04g023800 Solanum pennellii HOM05D000392 ORTHO05D002065 3.7e-22 107.8 69 69.6
Sopen04g025720 Solanum pennellii HOM05D000002 ORTHO05D002065 3.7e-22 107.8 69 69.6
Sopen04g026730 Solanum pennellii HOM05D000392 ORTHO05D002065 3.7e-22 107.8 69 69.6
Sopen05g001590 Solanum pennellii HOM05D000392 ORTHO05D000001 3.7e-22 107.8 69 69.6
Sopen05g006720 Solanum pennellii HOM05D000392 ORTHO05D002065 3.7e-22 107.8 69 69.6
Sopen05g025330 Solanum pennellii HOM05D000002 ORTHO05D002065 3.7e-22 107.8 69 69.6
Sopen06g003740 Solanum pennellii HOM05D000392 ORTHO05D002065 3.7e-22 107.8 69 69.6
Sopen06g019790 Solanum pennellii HOM05D000002 ORTHO05D002065 3.7e-22 107.8 69 69.6
Sopen06g020490 Solanum pennellii HOM05D000392 ORTHO05D002065 3.7e-22 107.8 69 69.6
Sopen06g021220 Solanum pennellii HOM05D000392 ORTHO05D002065 3.7e-22 107.8 69 69.6
Sopen06g025370 Solanum pennellii HOM05D000392 ORTHO05D002065 3.7e-22 107.8 69 69.6
Sopen06g029030 Solanum pennellii HOM05D000392 ORTHO05D002065 3.7e-22 107.8 69 69.6
Sopen07g020050 Solanum pennellii HOM05D000002 ORTHO05D002065 3.7e-22 107.8 69 69.6
Sopen07g022000 Solanum pennellii HOM05D000392 ORTHO05D002065 3.7e-22 107.8 69 69.6
Sopen07g028380 Solanum pennellii HOM05D000392 ORTHO05D002065 3.7e-22 107.8 69 69.6
Sopen07g032760 Solanum pennellii HOM05D000392 ORTHO05D002065 3.7e-22 107.8 69 69.6
Sopen07g033180 Solanum pennellii HOM05D000392 ORTHO05D002065 3.7e-22 107.8 69 69.6
Sopen08g029640 Solanum pennellii HOM05D000392 ORTHO05D002065 3.7e-22 107.8 69 69.6
Sopen09g007350 Solanum pennellii HOM05D000392 ORTHO05D002065 3.7e-22 107.8 69 69.6
Sopen09g007940 Solanum pennellii HOM05D000392 ORTHO05D002065 3.7e-22 107.8 69 69.6
Sopen09g010790 Solanum pennellii HOM05D000392 ORTHO05D002065 3.7e-22 107.8 69 69.6
Sopen09g015720 Solanum pennellii HOM05D000392 ORTHO05D002065 3.7e-22 107.8 69 69.6
Sopen09g027600 Solanum pennellii HOM05D000392 ORTHO05D002065 3.7e-22 107.8 69 69.6
Sopen09g031920 Solanum pennellii HOM05D000002 ORTHO05D002065 3.7e-22 107.8 69 69.6
Sopen10g010780 Solanum pennellii HOM05D000002 ORTHO05D002065 3.7e-22 107.8 69 69.6
Sopen10g021220 Solanum pennellii HOM05D000392 ORTHO05D002065 3.7e-22 107.8 69 69.6
Sopen11g010530 Solanum pennellii HOM05D000002 ORTHO05D002065 3.7e-22 107.8 69 69.6
Sopen11g026270 Solanum pennellii HOM05D000392 ORTHO05D002065 3.7e-22 107.8 69 69.6
Sopen12g020430 Solanum pennellii HOM05D000392 ORTHO05D002065 3.7e-22 107.8 69 69.6
Sopen12g023100 Solanum pennellii HOM05D000392 ORTHO05D002065 3.7e-22 107.8 69 69.6
Sopen08g009910 Solanum pennellii HOM05D000002 ORTHO05D002065 4.9e-22 107.5 73 65.8
Sopen08g009950 Solanum pennellii HOM05D000002 ORTHO05D002065 4.9e-22 107.5 73 65.8
Sopen08g018170 Solanum pennellii HOM05D000002 ORTHO05D002065 4.9e-22 107.5 70 68.6
Sopen04g008860 Solanum pennellii HOM05D000002 ORTHO05D002065 6.3e-22 107.1 76 67.1
Sopen06g006920 Solanum pennellii HOM05D000002 ORTHO05D002065 8.3e-22 106.7 73 64.4
Sopen11g021220 Solanum pennellii HOM05D000392 ORTHO05D000610 1.4e-21 105.9 73 64.4
Sopen06g006170 Solanum pennellii HOM05D000002 ORTHO05D002065 1.8e-21 105.5 68 70.6
Sopen06g012160 Solanum pennellii HOM05D000002 ORTHO05D002065 1.8e-21 105.5 67 67.2
Sopen06g017280 Solanum pennellii HOM05D000002 ORTHO05D002065 1.8e-21 105.5 69 68.1
Sopen07g012530 Solanum pennellii HOM05D000002 ORTHO05D002065 1.8e-21 105.5 70 67.1
SHI13561 Sapria himalayana HOM05D000014 ORTHO05D002065 2.4e-21 105.1 69 69.6
Sopen08g005170 Solanum pennellii HOM05D000002 ORTHO05D002065 2.4e-21 105.1 73 64.4
Sopen02g022980 Solanum pennellii HOM05D000002 ORTHO05D002065 5.4e-21 104.0 76 63.2
Sopen04g007580 Solanum pennellii HOM05D000395 ORTHO05D002065 5.4e-21 104.0 68 66.2
Sopen06g015990 Solanum pennellii HOM05D000002 ORTHO05D002065 7.0e-21 103.6 68 66.2
ECA232G1868 Erigeron canadensis HOM05D000002 ORTHO05D002065 1.6e-20 102.4 64 73.4
Sopen01g015900 Solanum pennellii HOM05D000002 ORTHO05D002065 2.0e-20 102.1 76 63.2
Atru.chr10.1217 Acer truncatum HOM05D000002 ORTHO05D002065 5.9e-20 100.5 69 65.2
Sopen04g012860 Solanum pennellii HOM05D000002 ORTHO05D002065 1.7e-19 99.0 62 69.4
Sopen05g026210 Solanum pennellii HOM05D000002 ORTHO05D002065 2.9e-19 98.2 69 65.2
SHI24009 Sapria himalayana HOM05D000392 ORTHO05D002065 5.0e-19 97.4 68 67.6
Sopen03g019930 Solanum pennellii HOM05D000002 ORTHO05D002065 5.0e-19 97.4 72 61.1
ECA247G0139 Erigeron canadensis HOM05D000002 ORTHO05D002065 1.5e-18 95.9 72 59.7
SHI34819 Sapria himalayana HOM05D000105 ORTHO05D000023 2.5e-18 95.1 57 78.9
HanXRQChr15g0481031 Helianthus annuus HOM05D000002 ORTHO05D002065 3.0e-16 88.2 62 59.7
TPR.G40444 Trifolium pratense HOM05D000002 ORTHO05D002065 4.0e-16 87.8 70 57.1
Atru.chr7.457 Acer truncatum HOM05D000392 ORTHO05D002065 6.8e-16 87.0 63 61.9
SHI18174 Sapria himalayana HOM05D000002 ORTHO05D002065 1.5e-15 85.9 69 56.5
Sopen10g023800 Solanum pennellii HOM05D000002 ORTHO05D002065 2.6e-15 85.1 52 73.1
CAN.G1166.13 Capsicum annuum HOM05D003532 ORTHO05D003298 5.7e-15 84.0 69 53.6
RcHm_v2.0_Chr2g0138291 Rosa chinensis HOM05D000002 ORTHO05D002065 9.8e-15 83.2 69 55.1
RcHm_v2.0_Chr2g0150891 Rosa chinensis HOM05D000002 ORTHO05D002065 9.8e-15 83.2 69 55.1
RcHm_v2.0_Chr7g0186831 Rosa chinensis HOM05D000002 ORTHO05D002065 9.8e-15 83.2 69 55.1
CAN.G1398.6 Capsicum annuum HOM05D001300 ORTHO05D004991 1.3e-14 82.8 70 52.9
RcHm_v2.0_Chr5g0012171 Rosa chinensis HOM05D000002 ORTHO05D002065 1.3e-14 82.8 69 55.1
Sopen09g030360 Solanum pennellii HOM05D000002 ORTHO05D002065 1.3e-14 82.8 51 72.5
RcHm_v2.0_Chr1g0323091 Rosa chinensis HOM05D000002 ORTHO05D002065 1.7e-14 82.4 69 55.1
RcHm_v2.0_Chr2g0148911 Rosa chinensis HOM05D000002 ORTHO05D002065 1.7e-14 82.4 69 55.1
SHI10813 Sapria himalayana HOM05D000392 ORTHO05D002065 1.7e-14 82.4 63 58.7
RcHm_v2.0_Chr1g0367381 Rosa chinensis HOM05D000002 ORTHO05D002065 3.7e-14 81.3 69 52.2
RcHm_v2.0_Chr7g0185711 Rosa chinensis HOM05D000002 ORTHO05D002065 3.7e-14 81.3 69 53.6
Sopen11g025450 Solanum pennellii HOM05D000002 ORTHO05D002065 4.9e-14 80.9 48 72.9
FvH4_6g44542 Fragaria vesca HOM05D000002 ORTHO05D002065 8.3e-14 80.1 69 55.1
SHI16422 Sapria himalayana HOM05D000392 ORTHO05D002065 8.3e-14 80.1 50 76.0
SHI24468 Sapria himalayana HOM05D000392 ORTHO05D002065 2.4e-13 78.6 63 55.6
PSO832G0813 Papaver somniferum HOM05D000002 ORTHO05D002065 7.0e-13 77.0 69 50.7
Sopen01g017650 Solanum pennellii HOM05D000002 ORTHO05D002065 1.2e-12 76.3 41 80.5
Sopen11g016080 Solanum pennellii HOM05D000002 ORTHO05D002065 1.2e-12 76.3 52 67.3
PSO478G0776 Papaver somniferum HOM05D000002 ORTHO05D002065 2.0e-12 75.5 68 51.5
Rhsim01G0144900 Rhododendron simsii HOM05D015982 ORTHO05D012861 3.5e-12 74.7 46 71.7
SHI28130 Sapria himalayana HOM05D000392 ORTHO05D002065 5.9e-12 73.9 47 72.3
PSO675G0833 Papaver somniferum HOM05D000003 ORTHO05D000004 7.8e-12 73.6 69 46.4
ECA240G3077 Erigeron canadensis HOM05D002958 ORTHO05D003558 1.0e-11 73.2 38 84.2
SHI28751 Sapria himalayana HOM05D000392 ORTHO05D002065 1.0e-11 73.2 36 86.1
PSO339G0063 Papaver somniferum HOM05D000392 ORTHO05D002065 1.3e-11 72.8 69 47.8
CAN.G732.3 Capsicum annuum HOM05D000902 ORTHO05D000832 5.0e-11 70.9 50 60.0
Manes.01G054202 Manihot esculenta HOM05D000002 ORTHO05D002065 8.6e-11 70.1 37 78.4
Aa31sc211G30 Aethionema arabicum HOM05D018491 ORTHO05D002065 2.5e-10 68.6 41 73.2
RcHm_v2.0_Chr6g0282941 Rosa chinensis HOM05D000392 ORTHO05D002065 2.5e-10 68.6 64 51.6
SHI32075 Sapria himalayana HOM05D000392 ORTHO05D002065 4.3e-10 67.8 60 55.0
PSO210G3698 Papaver somniferum HOM05D000392 ORTHO05D002065 5.6e-10 67.4 64 48.4
ClCG10G005890 Citrullus lanatus HOM05D000003 ORTHO05D000004 7.3e-10 67.0 53 58.5
RcHm_v2.0_Chr3g0491271 Rosa chinensis HOM05D000002 ORTHO05D002065 1.2e-09 66.2 70 44.3
Rhsim10G0160900 Rhododendron simsii HOM05D000392 ORTHO05D002065 8.0e-09 63.5 34 76.5
Thhalv10011182m.g Eutrema salsugineum HOM05D003502 ORTHO05D004250 1.8e-08 62.4 74 47.3
CAN.G97.18 Capsicum annuum HOM05D000541 ORTHO05D000137 4.0e-08 61.2 46 60.9
SHI17094 Sapria himalayana HOM05D000392 ORTHO05D002065 1.2e-07 59.7 36 77.8
Atru.chr6.2292 Acer truncatum HOM05D000002 ORTHO05D002065 4.4e-07 57.8 42 54.8
ClCG05G011950 Citrullus lanatus HOM05D000337 ORTHO05D000297 2.9e-06 55.1 33 63.6
SGA_v2.0_scaffold6G03312 Striga asiatica HOM05D001472 ORTHO05D007811 3.7e-06 54.7 42 59.5
ECA234G1106 Erigeron canadensis HOM05D000392 ORTHO05D002065 4.9e-06 54.3 74 39.2
SHI29116 Sapria himalayana HOM05D000392 ORTHO05D000610 8.3e-06 53.5 29 75.9


User provided reference genes

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