Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI11477 Sapria himalayana HOM05D005401 ORTHO05D006582 1.5e-237 825.9 435 100.0
Haze_25113 Corylus avellana HOM05D005401 ORTHO05D006582 1.6e-135 486.9 466 61.4
Dinv03731 Davidia involucrata HOM05D005401 ORTHO05D006582 1.2e-133 480.7 467 60.4
Potri.007G108200 Populus trichocarpa HOM05D005401 ORTHO05D006582 1.9e-131 473.4 462 52.2
Gohir.A11G221000 Gossypium hirsutum HOM05D005401 ORTHO05D006582 3.5e-130 469.2 465 59.8
Gohir.D11G230200 Gossypium hirsutum HOM05D005401 ORTHO05D006582 7.9e-130 468.0 466 54.9
Duzib147G0934 Durio zibethinus HOM05D005401 ORTHO05D006582 1.0e-129 467.6 466 59.4
Gohir.A11G226902 Gossypium hirsutum HOM05D005401 ORTHO05D006582 1.1e-128 464.2 467 52.7
Thecc.01G128200 Theobroma cacao HOM05D005401 ORTHO05D006582 1.5e-128 463.8 466 59.4
CiPaw.03G129100 Carya illinoinensis HOM05D005401 ORTHO05D006582 4.3e-128 462.2 466 58.6
Manes.13G082700 Manihot esculenta HOM05D005401 ORTHO05D006582 1.6e-127 460.3 466 57.5
Gorai.003G067300 Gossypium raimondii HOM05D005401 ORTHO05D006582 2.1e-127 459.9 467 52.5
GSVIVG01026512001 Vitis vinifera HOM05D005401 ORTHO05D006582 3.7e-127 459.1 466 58.8
Nn1g06207 Nelumbo nucifera HOM05D005401 ORTHO05D006582 6.2e-127 458.4 477 57.9
EL10Ac7g17633 Beta vulgaris HOM05D005401 ORTHO05D006582 2.4e-126 456.4 467 58.2
Rhsim10G0136100 Rhododendron simsii HOM05D005401 ORTHO05D006582 5.3e-126 455.3 466 58.2
TAR628G0360 Trochodendron aralioides HOM05D005401 ORTHO05D006582 6.9e-126 454.9 478 54.2
Actinidia06639 Actinidia chinensis HOM05D005401 ORTHO05D006582 1.2e-125 454.1 470 57.4
Hma1.2p1_0528F.1_g173030 Hydrangea macrophylla HOM05D005401 ORTHO05D006582 1.2e-125 454.1 461 59.2
MSTRG.23445 Avicennia marina HOM05D005401 ORTHO05D006582 2.6e-125 453.0 470 51.3
QL06p029214 Quercus lobata HOM05D005401 ORTHO05D006582 2.6e-125 453.0 438 60.5
TWI79G0453 Tripterygium wilfordii HOM05D005401 ORTHO05D006582 4.5e-125 452.2 466 57.3
Nitab4.5_0000805g0050 Nicotiana tabacum HOM05D005401 ORTHO05D006582 1.3e-124 450.7 461 57.9
AUR62003599 Chenopodium quinoa HOM05D005401 ORTHO05D006582 3.8e-124 449.1 472 57.0
Ah.02g121770 Amaranthus hybridus HOM05D005401 ORTHO05D006582 7.1e-123 444.9 466 56.9
Oeu024886.1 Olea europaea HOM05D005401 ORTHO05D006582 7.1e-123 444.9 470 58.1
Ciclev10000834m.g Citrus clementina HOM05D005401 ORTHO05D006582 1.6e-122 443.7 452 54.9
AUR62017910 Chenopodium quinoa HOM05D005401 ORTHO05D006582 2.1e-122 443.4 491 49.1
Atru.chr4.842 Acer truncatum HOM05D005401 ORTHO05D006582 3.5e-122 442.6 428 54.4
Prupe.6G159400 Prunus persica HOM05D005401 ORTHO05D006582 2.3e-121 439.9 410 62.0
ClCG01G015480 Citrullus lanatus HOM05D005401 ORTHO05D006582 3.0e-121 439.5 493 55.8
Cfa002819 Carpinus fangiana HOM05D005401 ORTHO05D006582 3.9e-121 439.1 466 57.3
CANSAT01G1454 Cannabis sativa HOM05D005401 ORTHO05D006582 6.7e-121 438.3 466 49.4
Cc07_g18120 Coffea canephora HOM05D005401 ORTHO05D006582 1.1e-120 437.6 466 49.1
vmacro12864 Vaccinium macrocarpon HOM05D005401 ORTHO05D006582 1.1e-120 437.6 485 50.1
Lsat_1_v5_gn_7_27421 Lactuca sativa HOM05D005401 ORTHO05D006582 1.5e-120 437.2 488 52.3
Migut.H00736 Erythranthe guttata HOM05D005401 ORTHO05D006582 1.9e-120 436.8 475 49.7
PSO170G5022 Papaver somniferum HOM05D005401 ORTHO05D006582 4.3e-120 435.6 470 48.9
THA.LOC104799501 Tarenaya hassleriana HOM05D005401 ORTHO05D006582 4.3e-120 435.6 478 49.0
DCAR_001363 Daucus carota HOM05D005401 ORTHO05D006582 5.7e-120 435.3 493 54.2
Dinv24333 Davidia involucrata HOM05D005401 ORTHO05D006582 5.7e-120 435.3 472 50.2
Sopen11g001760 Solanum pennellii HOM05D005401 ORTHO05D006582 5.7e-120 435.3 467 55.5
Solyc11g005800.2 Solanum lycopersicum HOM05D005401 ORTHO05D006582 7.4e-120 434.9 467 55.7
Sc16g0003880 Simmondsia chinensis HOM05D005401 ORTHO05D006582 2.8e-119 433.0 466 56.0
CsaV3_6G041720 Cucumis sativus L. HOM05D005401 ORTHO05D006582 3.7e-119 432.6 488 55.3
PGSC0003DMG400028676 Solanum tuberosum HOM05D005401 ORTHO05D006582 4.8e-119 432.2 472 54.4
HanXRQChr04g0116521 Helianthus annuus HOM05D005401 ORTHO05D006582 1.8e-118 430.3 474 55.7
Sed0020894 Sechium edule HOM05D005401 ORTHO05D006582 4.1e-118 429.1 497 53.9
AL8G42040 Arabidopsis lyrata HOM05D005401 ORTHO05D006582 2.0e-117 426.8 501 48.1
ECA236G1881 Erigeron canadensis HOM05D005401 ORTHO05D006582 2.0e-117 426.8 468 56.6
COL.COLO4_14025 Corchorus olitorius HOM05D005401 ORTHO05D006582 3.4e-117 426.0 413 61.5
Carub.0008s2542 Capsella rubella HOM05D005401 ORTHO05D006582 5.9e-117 425.2 477 48.8
BolC3t18416H Brassica oleracea HOM05D005401 ORTHO05D006582 7.7e-117 424.9 505 46.1
BraA06t26078Z Brassica rapa HOM05D005401 ORTHO05D006582 7.7e-117 424.9 500 53.0
Aqoxy5G02178 Aquilegia oxysepala HOM05D005401 ORTHO05D006582 1.3e-116 424.1 412 59.7
Lj4A848G70 Lonicera japonica HOM05D005401 ORTHO05D006582 1.3e-116 424.1 523 45.3
RhsimUnG0132800 Rhododendron simsii HOM05D005401 ORTHO05D006582 1.3e-116 424.1 541 44.9
AT5G64630 Arabidopsis thaliana HOM05D005401 ORTHO05D006582 2.2e-116 423.3 509 49.1
BcaB02g09807 Brassica carinata HOM05D005401 ORTHO05D006582 2.2e-116 423.3 494 48.0
Eucgr.H04948 Eucalyptus grandis HOM05D005401 ORTHO05D006582 2.9e-116 422.9 471 54.6
MD01G1002400 Malus domestica HOM05D005401 ORTHO05D006582 5.0e-116 422.2 398 62.1
PSO017G4890 Papaver somniferum HOM05D005401 ORTHO05D006582 1.1e-115 421.0 473 48.0
BcaC01g02694 Brassica carinata HOM05D005401 ORTHO05D006582 1.4e-115 420.6 505 45.9
C03p61560 Brassica napus HOM05D005401 ORTHO05D006582 1.4e-115 420.6 505 45.9
PGR102G1978 Punica granatum HOM05D005401 ORTHO05D006582 2.5e-115 419.9 478 53.8
EL10Ac6g15280 Beta vulgaris HOM05D005401 ORTHO05D006582 4.6e-114 415.6 483 47.6
CSS0027531 Camellia sinensis var. sinensis HOM05D005401 ORTHO05D006582 4.6e-114 415.6 451 50.3
Aa31LG1G17320 Aethionema arabicum HOM05D005401 ORTHO05D006582 4.3e-112 409.1 405 51.6
Ca_17644_v3 Cicer arietinum L. HOM05D005401 ORTHO05D006582 5.7e-112 408.7 386 53.4
Hund08501 Selenicereus undatus HOM05D005401 ORTHO05D006582 2.2e-111 406.8 438 56.2
MBI06_g43013_MAGBIO Magnolia biondii HOM05D005401 ORTHO05D006582 3.7e-111 406.0 468 47.4
Psat7g046640 Pisum sativum HOM05D005401 ORTHO05D006582 8.2e-111 404.8 386 52.3
Peaxi162Scf00012g01522 Petunia axillaris HOM05D005401 ORTHO05D006582 3.1e-110 402.9 460 54.3
FAN23G2510 Fragaria x ananassa HOM05D005401 ORTHO05D006582 4.5e-109 399.1 386 53.6
CDE02G0389 Ceratophyllum demersum HOM05D005401 ORTHO05D006582 2.9e-108 396.4 452 52.4
Os08g0108200 Oryza sativa ssp. japonica HOM05D005401 ORTHO05D006582 5.0e-108 395.6 461 46.4
Glyma.05G190800 Glycine max HOM05D005401 ORTHO05D006582 3.2e-107 392.9 393 50.9
Glyma.08G156200 Glycine max HOM05D005401 ORTHO05D006582 1.6e-106 390.6 393 50.9
Lalb_Chr12g0203191 Lupinus albus HOM05D005401 ORTHO05D006582 1.6e-106 390.6 394 50.8
Lalb_Chr13g0296571 Lupinus albus HOM05D005401 ORTHO05D006582 6.7e-105 385.2 441 48.1
Nitab4.5_0000877g0070 Nicotiana tabacum HOM05D005401 ORTHO05D006582 6.7e-105 385.2 466 46.4
HPP92_001192 Vanilla planifolia HOM05D005401 ORTHO05D006582 6.7e-105 385.2 468 46.6
Sp2g27690 Schrenkiella parvula HOM05D005401 ORTHO05D006582 2.0e-104 383.6 435 53.1
Zm00001eb260310 Zea mays HOM05D005401 ORTHO05D006582 5.7e-104 382.1 436 46.6
Phvul.002G271200 Phaseolus vulgaris HOM05D005401 ORTHO05D006582 9.7e-104 381.3 441 47.2
CARHR278600 Cardamine hirsuta HOM05D005401 ORTHO05D006582 3.7e-103 379.4 502 50.4
Lalb_Chr00c34g0408611 Lupinus albus HOM05D005401 ORTHO05D006582 1.2e-101 374.4 385 50.6
VMungo0251G3661 Vigna mungo HOM05D005401 ORTHO05D006582 4.5e-101 372.5 398 49.7
unitig_899.g14701 Utricularia gibba HOM05D005401 ORTHO05D006582 2.9e-100 369.8 361 55.7
ATR1136G147 Amborella trichopoda HOM05D005401 ORTHO05D006582 8.5e-100 368.2 474 43.7
SGA_v2.0_scaffold355G49767 Striga asiatica HOM05D005401 ORTHO05D006582 1.5e-99 367.5 435 52.6
RcHm_v2.0_Chr2g0120381 Rosa chinensis HOM05D005401 ORTHO05D006582 5.5e-99 365.5 412 56.6
Thhalv10004101m.g Eutrema salsugineum HOM05D005401 ORTHO05D006582 3.6e-98 362.8 497 42.9
MELO3C008048.2 Cucumis melo HOM05D005401 ORTHO05D006582 8.0e-98 361.7 337 64.4
FAN28G1662 Fragaria x ananassa HOM05D005401 ORTHO05D006582 1.5e-96 357.5 402 55.5
FAN26G1589 Fragaria x ananassa HOM05D005401 ORTHO05D006582 9.7e-96 354.8 378 57.7
FvH4_1g24150 Fragaria vesca HOM05D005401 ORTHO05D006582 1.8e-94 350.5 413 54.0
Medtr8g093540 Medicago truncatula HOM05D005401 ORTHO05D006582 4.1e-94 349.4 386 46.4
FAN19G2420 Fragaria x ananassa HOM05D005401 ORTHO05D006582 4.2e-91 339.3 390 55.9
Lj4g0023934 Lotus japonicus HOM05D005401 ORTHO05D006582 2.3e-89 333.6 435 42.1
A06p31360 Brassica napus HOM05D005401 ORTHO05D006582 5.7e-88 328.9 453 41.1
arahy.Tifrunner.gnm1.ann1.LMDE4E Arachis hypogaea HOM05D005401 ORTHO05D006582 1.7e-87 327.4 394 44.4
HPP92_001165 Vanilla planifolia HOM05D005401 ORTHO05D006582 8.3e-87 325.1 388 45.6
arahy.Tifrunner.gnm1.ann1.N6RYVU Arachis hypogaea HOM05D005401 ORTHO05D006582 1.8e-86 323.9 394 44.2
Sabra07G0088600 Salix brachista HOM05D005401 ORTHO05D006582 7.2e-83 312.0 317 51.4
AagrBONN_evm.TU.Sc2ySwM_117.3371 Anthoceros agrestis HOM05D005401 ORTHO05D006582 1.4e-78 297.7 418 46.2
Mapoly0080s0001 Marchantia polymorpha HOM05D005401 ORTHO05D006582 5.9e-77 292.4 417 39.1
TPR.G37327 Trifolium pratense HOM05D005401 ORTHO05D006582 1.8e-73 280.8 258 53.9
AUR62043710 Chenopodium quinoa HOM05D005401 ORTHO05D006582 6.8e-73 278.9 401 42.6
CBR_g20440 Chara braunii HOM05D005401 ORTHO05D006582 4.4e-64 249.6 408 37.7
SEGI_26195 Sequoiadendron giganteum HOM05D005401 ORTHO05D006582 1.3e-60 238.0 254 59.4
HanXRQChr04g0116511 Helianthus annuus HOM05D005401 ORTHO05D006582 2.9e-55 220.3 304 41.4
Cc06_g17340 Coffea canephora HOM05D005401 ORTHO05D006582 2.7e-53 213.8 248 46.8
Pp3c1_14660 Physcomitrium patens HOM05D005401 ORTHO05D006582 5.2e-49 199.5 434 39.4
Pp3c1_14663 Physcomitrium patens HOM05D005401 ORTHO05D006582 5.2e-49 199.5 434 39.4
PRCOL_00001389 Prasinoderma coloniale HOM05D005401 ORTHO05D006582 6.4e-47 192.6 494 29.6
Actinidia20088 Actinidia chinensis HOM05D005401 ORTHO05D006582 1.4e-41 174.9 236 43.2
Cc00_g25980 Coffea canephora HOM05D005401 ORTHO05D006582 1.1e-38 165.2 185 46.5
Cc06_g17330 Coffea canephora HOM05D005401 ORTHO05D006582 1.4e-38 164.9 185 47.6
Cc00_g32180 Coffea canephora HOM05D005401 ORTHO05D006582 8.7e-36 155.6 182 44.0
MD15G1342000 Malus domestica HOM05D005401 ORTHO05D006582 8.7e-36 155.6 252 38.5
Cpa.g.sc42.131 Carica papaya HOM05D005401 ORTHO05D006582 3.3e-35 153.7 126 59.5
Cc00_g35900 Coffea canephora HOM05D005401 ORTHO05D006582 3.6e-34 150.2 117 63.2
MCO05G520 Micromonas commoda HOM05D005401 ORTHO05D006582 5.3e-33 146.4 486 26.5
TPR.G8435 Trifolium pratense HOM05D005401 ORTHO05D006582 9.0e-33 145.6 155 49.0
SEGI_17010 Sequoiadendron giganteum HOM05D005401 ORTHO05D006582 4.4e-32 143.3 231 36.4
BcaB02g09802 Brassica carinata HOM05D005401 ORTHO05D006582 1.4e-30 138.3 124 54.8
ClCG01G015490 Citrullus lanatus HOM05D005401 ORTHO05D006582 1.8e-25 121.3 84 65.5
Actinidia08420 Actinidia chinensis HOM05D005401 ORTHO05D006582 9.0e-25 119.0 81 64.2
CDE10G0537 Ceratophyllum demersum HOM05D005401 ORTHO05D006582 2.6e-24 117.5 118 51.7
Cpa.g.c33663 Carica papaya HOM05D005401 ORTHO05D006582 9.9e-24 115.5 74 73.0
MD15G1342300 Malus domestica HOM05D005401 ORTHO05D006582 7.1e-22 109.4 112 53.6
Cfa026613 Carpinus fangiana HOM05D003901 ORTHO05D004511 1.2e-21 108.6 377 25.5
PRCOL_00000149 Prasinoderma coloniale HOM05D003901 ORTHO05D004511 2.8e-18 97.4 471 22.9
Cpa.g.sc3234.2 Carica papaya HOM05D005401 ORTHO05D006582 8.1e-18 95.9 67 65.7
VMungo0251G1870 Vigna mungo HOM05D000140 ORTHO05D004393 7.6e-16 89.4 84 47.6
BcaB02g09805 Brassica carinata HOM05D005401 ORTHO05D006582 8.4e-15 85.9 235 32.8
Cfa027226 Carpinus fangiana HOM05D005401 ORTHO05D006582 5.5e-14 83.2 143 31.5
HanXRQChr04g0116501 Helianthus annuus HOM05D005401 ORTHO05D006582 1.9e-11 74.7 39 76.9
Cre13.g575950 Chlamydomonas reinhardtii HOM05D003901 ORTHO05D004511 4.3e-11 73.6 376 21.0
Thecc.09G286400 Theobroma cacao HOM05D003901 ORTHO05D004511 2.8e-10 70.9 241 26.1
Manes.04G005300 Manihot esculenta HOM05D003901 ORTHO05D004511 3.7e-10 70.5 241 25.7
PGR102G2249 Punica granatum HOM05D003901 ORTHO05D004511 3.7e-10 70.5 476 22.5
Atru.chr3.3302 Acer truncatum HOM05D003901 ORTHO05D004511 5.3e-09 66.6 241 24.5
FvH4_3g24580 Fragaria vesca HOM05D003901 ORTHO05D004511 6.9e-09 66.2 241 25.3
CDE06G1793 Ceratophyllum demersum HOM05D003901 ORTHO05D004511 1.5e-08 65.1 241 24.1
Os09g0567700 Oryza sativa ssp. japonica HOM05D003901 ORTHO05D004511 2.6e-08 64.3 473 20.5
RcHm_v2.0_Chr1g0317731 Rosa chinensis HOM05D003901 ORTHO05D004511 2.6e-08 64.3 243 25.5
Zm00001eb307860 Zea mays HOM05D003901 ORTHO05D004511 5.9e-08 63.2 452 21.7
CBR_g60059 Chara braunii HOM05D003901 ORTHO05D004511 6.5e-07 59.7 476 20.6
Psat5g256560 Pisum sativum HOM05D003901 ORTHO05D004511 1.4e-06 58.5 303 22.4
Sed0011544 Sechium edule HOM05D005717 ORTHO05D007221 1.9e-06 58.2 191 24.1
Pp3c16_16320 Physcomitrium patens HOM05D003901 ORTHO05D004511 3.2e-06 57.4 450 20.9
Ah.15g095680 Amaranthus hybridus HOM05D003901 ORTHO05D004511 5.5e-06 56.6 75 36.0
Cpa.g.sc3.215 Carica papaya HOM05D005717 ORTHO05D007221 9.3e-06 55.8 201 22.9


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