Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI11059 Sapria himalayana HOM05D001353 ORTHO05D005187 9.5e-83 310.1 151 100.0
FAN05G1388 Fragaria x ananassa HOM05D001353 ORTHO05D005187 3.7e-10 68.9 115 40.0
ATR0315G016 Amborella trichopoda HOM05D001353 ORTHO05D005187 4.8e-10 68.6 56 58.9
Lsat_1_v5_gn_1_34781 Lactuca sativa HOM05D001353 ORTHO05D005187 6.3e-10 68.2 41 78.0
Cc04_g02860 Coffea canephora HOM05D001353 ORTHO05D005187 8.2e-10 67.8 55 65.5
TAR383G0250 Trochodendron aralioides HOM05D001353 ORTHO05D005187 8.2e-10 67.8 40 75.0
Haze_16338 Corylus avellana HOM05D001353 ORTHO05D005187 1.1e-09 67.4 35 85.7
Cfa002108 Carpinus fangiana HOM05D001353 ORTHO05D005187 1.4e-09 67.0 35 82.9
FvH4_6g31960 Fragaria vesca HOM05D001353 ORTHO05D005187 1.4e-09 67.0 54 61.1
FAN02G4091 Fragaria x ananassa HOM05D001353 ORTHO05D005187 1.4e-09 67.0 54 61.1
Nn2g11646 Nelumbo nucifera HOM05D001353 ORTHO05D005187 1.4e-09 67.0 54 63.0
MD17G1188900 Malus domestica HOM05D001353 ORTHO05D005187 1.8e-09 66.6 35 82.9
Peaxi162Scf00015g00128 Petunia axillaris HOM05D001353 ORTHO05D005187 1.8e-09 66.6 35 85.7
RcHm_v2.0_Chr2g0139461 Rosa chinensis HOM05D001353 ORTHO05D005187 1.8e-09 66.6 54 61.1
CANSAT56G0514 Cannabis sativa HOM05D001353 ORTHO05D005187 2.4e-09 66.2 58 60.3
FAN14G4842 Fragaria x ananassa HOM05D001353 ORTHO05D005187 2.4e-09 66.2 114 38.6
Cpa.g.c32037 Carica papaya HOM05D001353 ORTHO05D005187 3.1e-09 65.9 74 48.6
CsaV3_7G033510 Cucumis sativus L. HOM05D001353 ORTHO05D005187 3.1e-09 65.9 42 71.4
CiPaw.01G234100 Carya illinoinensis HOM05D001353 ORTHO05D005187 4.1e-09 65.5 35 82.9
FAN02G1855 Fragaria x ananassa HOM05D001353 ORTHO05D005187 4.1e-09 65.5 35 82.9
Thhalv10020736m.g Eutrema salsugineum HOM05D001353 ORTHO05D005187 5.3e-09 65.1 35 82.9
Prupe.3G063900 Prunus persica HOM05D001353 ORTHO05D005187 5.3e-09 65.1 35 80.0
TWI12G1071 Tripterygium wilfordii HOM05D001353 ORTHO05D005187 5.3e-09 65.1 46 65.2
MELO3C024262.2 Cucumis melo HOM05D001353 ORTHO05D005187 7.0e-09 64.7 42 71.4
Sed0007714 Sechium edule HOM05D001353 ORTHO05D005187 7.0e-09 64.7 35 82.9
Ciclev10025383m.g Citrus clementina HOM05D001353 ORTHO05D005187 1.2e-08 63.9 35 82.9
Gohir.D09G081500 Gossypium hirsutum HOM05D001353 ORTHO05D005187 1.2e-08 63.9 58 53.4
Gorai.006G097100 Gossypium raimondii HOM05D001353 ORTHO05D005187 1.2e-08 63.9 58 53.4
AL3G28930 Arabidopsis lyrata HOM05D001353 ORTHO05D005187 1.6e-08 63.5 34 82.4
AT3G16230 Arabidopsis thaliana HOM05D001353 ORTHO05D005187 1.6e-08 63.5 34 82.4
Manes.11G036600 Manihot esculenta HOM05D001353 ORTHO05D005187 1.6e-08 63.5 35 77.1
BcaB04g18890 Brassica carinata HOM05D001353 ORTHO05D005187 2.0e-08 63.2 60 56.7
CSS0044224 Camellia sinensis var. sinensis HOM05D001353 ORTHO05D005187 2.0e-08 63.2 41 68.3
Gohir.A09G081400 Gossypium hirsutum HOM05D001353 ORTHO05D005187 2.0e-08 63.2 58 53.4
Lj3g0013233 Lotus japonicus HOM05D001353 ORTHO05D005187 2.0e-08 63.2 112 35.7
Rhsim12G0201500 Rhododendron simsii HOM05D001353 ORTHO05D000070 2.0e-08 63.2 62 50.0
Sopen03g039360 Solanum pennellii HOM05D001353 ORTHO05D005187 2.0e-08 63.2 35 80.0
THA.LOC104817973 Tarenaya hassleriana HOM05D001353 ORTHO05D005187 2.0e-08 63.2 42 66.7
Nitab4.5_0011578g0030 Nicotiana tabacum HOM05D001353 ORTHO05D005187 2.7e-08 62.8 35 82.9
vmacro16977 Vaccinium macrocarpon HOM05D001353 ORTHO05D005187 2.7e-08 62.8 39 74.4
Carub.0003s1598 Capsella rubella HOM05D001353 ORTHO05D005187 3.5e-08 62.4 34 79.4
Gohir.D03G060300 Gossypium hirsutum HOM05D001353 ORTHO05D005187 3.5e-08 62.4 43 67.4
Gorai.003G064100 Gossypium raimondii HOM05D001353 ORTHO05D005187 3.5e-08 62.4 43 67.4
Thecc.06G095300 Theobroma cacao HOM05D001353 ORTHO05D005187 3.5e-08 62.4 35 80.0
arahy.Tifrunner.gnm1.ann1.8T8ZNV Arachis hypogaea HOM05D001353 ORTHO05D005187 4.5e-08 62.0 35 77.1
arahy.Tifrunner.gnm1.ann1.K0TTLC Arachis hypogaea HOM05D001353 ORTHO05D005187 4.5e-08 62.0 35 77.1
QL05p021219 Quercus lobata HOM05D001353 ORTHO05D005187 4.5e-08 62.0 35 80.0
Solyc03g120480.3 Solanum lycopersicum HOM05D001353 ORTHO05D005187 4.5e-08 62.0 35 80.0
Actinidia21695 Actinidia chinensis HOM05D001353 ORTHO05D005187 5.9e-08 61.6 51 58.8
BcaC01g03834 Brassica carinata HOM05D001353 ORTHO05D005187 5.9e-08 61.6 34 82.4
C03p48170 Brassica napus HOM05D001353 ORTHO05D005187 5.9e-08 61.6 34 82.4
BolC3t17020H Brassica oleracea HOM05D001353 ORTHO05D005187 5.9e-08 61.6 34 82.4
BraA03t13123Z Brassica rapa HOM05D001353 ORTHO05D005187 5.9e-08 61.6 34 82.4
CAN.G438.39 Capsicum annuum HOM05D001353 ORTHO05D005187 5.9e-08 61.6 34 79.4
HanXRQChr04g0096261 Helianthus annuus HOM05D001353 ORTHO05D005187 5.9e-08 61.6 34 82.4
PGSC0003DMG401002551 Solanum tuberosum HOM05D001353 ORTHO05D005187 5.9e-08 61.6 34 79.4
COL.COLO4_30465 Corchorus olitorius HOM05D000453 ORTHO05D000387 7.7e-08 61.2 35 77.1
Eucgr.F03052 Eucalyptus grandis HOM05D001353 ORTHO05D005187 7.7e-08 61.2 37 78.4
Nitab4.5_0006985g0030 Nicotiana tabacum HOM05D001353 ORTHO05D005187 7.7e-08 61.2 35 80.0
QL05p021238 Quercus lobata HOM05D001353 ORTHO05D005187 7.7e-08 61.2 35 77.1
Sabra01G0153700 Salix brachista HOM05D001353 ORTHO05D005187 7.7e-08 61.2 31 87.1
Duzib160G0428 Durio zibethinus HOM05D001353 ORTHO05D005187 1.0e-07 60.8 35 77.1
FvH4_4g23310 Fragaria vesca HOM05D001353 ORTHO05D005187 1.0e-07 60.8 35 77.1
FAN12G2992 Fragaria x ananassa HOM05D001353 ORTHO05D005187 1.0e-07 60.8 35 77.1
Lalb_Chr24g0396041 Lupinus albus HOM05D001353 ORTHO05D005187 1.0e-07 60.8 34 79.4
GSVIVG01017044001 Vitis vinifera HOM05D001353 ORTHO05D005187 1.0e-07 60.8 34 76.5
Migut.I00929 Erythranthe guttata HOM05D001353 ORTHO05D005187 1.3e-07 60.5 35 80.0
SHI21930 Sapria himalayana HOM05D003001 ORTHO05D003494 1.3e-07 60.5 40 75.0
ECA247G1811 Erigeron canadensis HOM05D001353 ORTHO05D005187 1.7e-07 60.1 35 74.3
PSO566G0332 Papaver somniferum HOM05D001353 ORTHO05D005187 1.7e-07 60.1 36 72.2
Medtr2g101350 Medicago truncatula HOM05D001353 ORTHO05D005187 2.2e-07 59.7 113 35.4
SalBow2G1883 Salvia bowleyana HOM05D001353 ORTHO05D005187 2.2e-07 59.7 36 72.2
Aqoxy7G01510 Aquilegia oxysepala HOM05D001353 ORTHO05D005187 2.9e-07 59.3 35 71.4
A03p39730 Brassica napus HOM05D001353 ORTHO05D005187 2.9e-07 59.3 34 76.5
Phvul.005G170400 Phaseolus vulgaris HOM05D001353 ORTHO05D005187 2.9e-07 59.3 34 76.5
Nitab4.5_0000568g0110 Nicotiana tabacum HOM05D001353 ORTHO05D005187 3.8e-07 58.9 77 41.6
PSO782G2586 Papaver somniferum HOM05D001353 ORTHO05D005187 3.8e-07 58.9 36 69.4
Psat1g005440 Pisum sativum HOM05D001353 ORTHO05D005187 3.8e-07 58.9 34 73.5
HPP92_005271 Vanilla planifolia HOM05D001353 ORTHO05D005187 3.8e-07 58.9 39 69.2
CARHR091420 Cardamine hirsuta HOM05D001353 ORTHO05D005187 5.0e-07 58.5 36 72.2
Dinv30464 Davidia involucrata HOM05D001353 ORTHO05D005187 5.0e-07 58.5 35 74.3
Nitab4.5_0001591g0200 Nicotiana tabacum HOM05D001353 ORTHO05D005187 5.0e-07 58.5 95 35.8
Ca_01153_v3 Cicer arietinum L. HOM05D001353 ORTHO05D005187 6.5e-07 58.2 39 64.1
ClCG09G001840 Citrullus lanatus HOM05D001353 ORTHO05D005187 6.5e-07 58.2 35 71.4
DCAR_007575 Daucus carota HOM05D001353 ORTHO05D005187 6.5e-07 58.2 34 73.5
MBI01_g06185_MAGBIO Magnolia biondii HOM05D001353 ORTHO05D002359 6.5e-07 58.2 35 74.3
Potri.001G186600 Populus trichocarpa HOM05D001353 ORTHO05D005187 6.5e-07 58.2 65 46.2
SGA_v2.0_scaffold5G02539 Striga asiatica HOM05D001353 ORTHO05D005187 6.5e-07 58.2 35 71.4
VMungo1080G1628 Vigna mungo HOM05D001353 ORTHO05D005187 6.5e-07 58.2 35 71.4
BolC3t17095H Brassica oleracea HOM05D001353 ORTHO05D000017 8.5e-07 57.8 32 81.2
Glyma.15G018200 Glycine max HOM05D001353 ORTHO05D005187 8.5e-07 57.8 34 73.5
PGR102G2383 Punica granatum HOM05D001353 ORTHO05D005187 8.5e-07 57.8 34 76.5
Hma1.2p1_0659F.1_g197330 Hydrangea macrophylla HOM05D001353 ORTHO05D005187 1.1e-06 57.4 34 73.5
Nitab4.5_0000568g0100 Nicotiana tabacum HOM05D001353 ORTHO05D005187 1.5e-06 57.0 35 71.4
Nitab4.5_0021337g0010 Nicotiana tabacum HOM05D001353 ORTHO05D005187 1.5e-06 57.0 77 40.3
SHI18000 Sapria himalayana HOM05D000083 ORTHO05D003582 1.5e-06 57.0 35 82.9
EL10Ac9g22047 Beta vulgaris HOM05D001353 ORTHO05D005187 1.9e-06 56.6 37 67.6
Os01g0231900 Oryza sativa ssp. japonica HOM05D001353 ORTHO05D005187 1.9e-06 56.6 53 54.7
Sc10g0007280 Simmondsia chinensis HOM05D001353 ORTHO05D005187 1.9e-06 56.6 36 69.4
Actinidia32713 Actinidia chinensis HOM05D001353 ORTHO05D005187 2.5e-06 56.2 35 71.4
Aa31LG8G3360 Aethionema arabicum HOM05D001353 ORTHO05D005187 2.5e-06 56.2 40 65.0
Gohir.A02G119400 Gossypium hirsutum HOM05D001353 ORTHO05D005187 2.5e-06 56.2 32 78.1
Sp3g14600 Schrenkiella parvula HOM05D001353 ORTHO05D005187 2.5e-06 56.2 34 73.5
Hund00659 Selenicereus undatus HOM05D001353 ORTHO05D005187 3.2e-06 55.8 36 66.7
TPR.G37234 Trifolium pratense HOM05D001353 ORTHO05D005187 3.2e-06 55.8 34 67.6
unitig_22.g6211 Utricularia gibba HOM05D001353 ORTHO05D005187 3.2e-06 55.8 40 62.5
Zm00001eb119210 Zea mays HOM05D001353 ORTHO05D005187 3.2e-06 55.8 41 63.4
MSTRG.11044 Avicennia marina HOM05D001353 ORTHO05D005187 4.2e-06 55.5 35 77.1


User provided reference genes

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