Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI10456 Sapria himalayana HOM05D003395 ORTHO05D004087 0.0e+00 1301.6 677 100.0
Manes.11G065000 Manihot esculenta HOM05D003395 ORTHO05D004087 8.5e-232 807.4 561 74.2
Haze_19811 Corylus avellana HOM05D003395 ORTHO05D004087 7.2e-231 804.3 561 72.5
Haze_19814 Corylus avellana HOM05D003395 ORTHO05D004087 4.7e-230 801.6 561 72.4
TWI74G0608 Tripterygium wilfordii HOM05D003395 ORTHO05D004087 1.7e-227 793.1 561 71.8
QL07p003024 Quercus lobata HOM05D003395 ORTHO05D004087 3.7e-227 792.0 561 72.0
Medtr2g103370 Medicago truncatula HOM05D003395 ORTHO05D004087 2.0e-225 786.2 561 70.8
GSVIVG01033240001 Vitis vinifera HOM05D003395 ORTHO05D004087 2.7e-225 785.8 561 71.3
Duzib128G1779 Durio zibethinus HOM05D003395 ORTHO05D004087 3.5e-225 785.4 561 70.6
CiPaw.09G039800 Carya illinoinensis HOM05D003395 ORTHO05D004087 4.5e-225 785.0 561 70.8
Ca_01074_v3 Cicer arietinum L. HOM05D003395 ORTHO05D004087 4.5e-225 785.0 561 70.8
Dinv39652 Davidia involucrata HOM05D003395 ORTHO05D004087 4.5e-225 785.0 561 71.8
ClCG10G015680 Citrullus lanatus HOM05D003395 ORTHO05D004087 5.9e-225 784.6 561 71.3
Glyma.15G010000 Glycine max HOM05D003395 ORTHO05D004087 5.9e-225 784.6 561 71.5
Potri.012G034800 Populus trichocarpa HOM05D003395 ORTHO05D004087 5.9e-225 784.6 561 70.9
Atru.chr1.1149 Acer truncatum HOM05D003395 ORTHO05D004087 2.3e-224 782.7 562 71.5
TPR.G37242 Trifolium pratense HOM05D003395 ORTHO05D004087 3.8e-224 781.9 561 70.9
MELO3C009808.2 Cucumis melo HOM05D003395 ORTHO05D004087 5.0e-224 781.6 561 71.1
CSS0000776 Camellia sinensis var. sinensis HOM05D003395 ORTHO05D004087 1.9e-223 779.6 561 69.7
Ciclev10004294m.g Citrus clementina HOM05D003395 ORTHO05D004087 1.9e-223 779.6 561 70.4
Glyma.13G363900 Glycine max HOM05D003395 ORTHO05D004087 1.9e-223 779.6 561 70.8
Potri.015G026200 Populus trichocarpa HOM05D003395 ORTHO05D004087 2.5e-223 779.2 561 70.1
MD12G1080600 Malus domestica HOM05D003395 ORTHO05D004087 5.5e-223 778.1 561 71.5
Sabra12G0023800 Salix brachista HOM05D003395 ORTHO05D004087 5.5e-223 778.1 561 69.5
RcHm_v2.0_Chr3g0483381 Rosa chinensis HOM05D003395 ORTHO05D004087 7.2e-223 777.7 561 70.8
CsaV3_3G040740 Cucumis sativus L. HOM05D003395 ORTHO05D004087 1.2e-222 776.9 561 70.8
Psat5g301400 Pisum sativum HOM05D003395 ORTHO05D004087 2.1e-222 776.2 561 69.7
COL.COLO4_22300 Corchorus olitorius HOM05D003395 ORTHO05D004087 2.8e-222 775.8 561 70.6
Sed0021456 Sechium edule HOM05D003395 ORTHO05D004087 2.8e-222 775.8 561 69.7
Phvul.005G175500 Phaseolus vulgaris HOM05D003395 ORTHO05D004087 3.6e-222 775.4 561 70.2
Lj3g0013293 Lotus japonicus HOM05D003395 ORTHO05D004087 6.1e-222 774.6 561 70.2
FvH4_6g24390 Fragaria vesca HOM05D003395 ORTHO05D004087 1.0e-221 773.9 561 70.8
Thecc.05G151200 Theobroma cacao HOM05D003395 ORTHO05D004087 1.8e-221 773.1 563 70.0
VMungo1080G0039 Vigna mungo HOM05D003395 ORTHO05D004087 1.8e-221 773.1 561 69.9
Haze_09905 Corylus avellana HOM05D003395 ORTHO05D004087 2.3e-221 772.7 561 70.4
TAR633G2151 Trochodendron aralioides HOM05D003395 ORTHO05D004087 2.0e-220 769.6 561 70.2
CANSAT80G2433 Cannabis sativa HOM05D003395 ORTHO05D004087 2.6e-220 769.2 561 70.1
FAN05G3635 Fragaria x ananassa HOM05D003395 ORTHO05D004087 3.4e-220 768.8 561 70.8
MD14G1076700 Malus domestica HOM05D003395 ORTHO05D004087 5.7e-220 768.1 561 70.6
vmacro09059 Vaccinium macrocarpon HOM05D003395 ORTHO05D004087 7.5e-220 767.7 561 69.2
FAN02G0096 Fragaria x ananassa HOM05D003395 ORTHO05D004087 1.7e-219 766.5 561 70.2
Sopen04g008350 Solanum pennellii HOM05D003395 ORTHO05D004087 8.3e-219 764.2 561 69.9
CAN.G676.13 Capsicum annuum HOM05D003395 ORTHO05D004087 1.1e-218 763.8 561 69.5
arahy.Tifrunner.gnm1.ann1.13YWQX Arachis hypogaea HOM05D003395 ORTHO05D004087 1.4e-218 763.5 561 68.3
arahy.Tifrunner.gnm1.ann1.C8DH2G Arachis hypogaea HOM05D003395 ORTHO05D004087 3.1e-218 762.3 561 68.3
Solyc04g016240.3 Solanum lycopersicum HOM05D003395 ORTHO05D004087 5.4e-218 761.5 561 69.5
Peaxi162Scf00130g00723 Petunia axillaris HOM05D003395 ORTHO05D004087 1.2e-217 760.4 561 69.0
Lalb_Chr24g0395581 Lupinus albus HOM05D003395 ORTHO05D004087 3.5e-217 758.8 561 68.3
Gohir.D11G326700 Gossypium hirsutum HOM05D003395 ORTHO05D004087 1.3e-216 756.9 561 68.6
Gorai.007G357300 Gossypium raimondii HOM05D003395 ORTHO05D004087 2.9e-216 755.7 561 68.4
Cc06_g17870 Coffea canephora HOM05D003395 ORTHO05D004087 2.5e-215 752.7 561 67.9
Nitab4.5_0000826g0280 Nicotiana tabacum HOM05D003395 ORTHO05D004087 2.5e-215 752.7 561 68.3
Nn7g36372 Nelumbo nucifera HOM05D003395 ORTHO05D004087 3.3e-215 752.3 563 68.6
SalBow1G6094 Salvia bowleyana HOM05D003395 ORTHO05D004087 1.2e-214 750.4 562 68.0
SalBow6G3234 Salvia bowleyana HOM05D003395 ORTHO05D004087 6.1e-214 748.0 562 67.4
Sabra15G0021800 Salix brachista HOM05D003395 ORTHO05D004087 3.0e-213 745.7 587 66.1
AT2G41620 Arabidopsis thaliana HOM05D003395 ORTHO05D004087 8.9e-213 744.2 560 66.2
Aqoxy2G00226 Aquilegia oxysepala HOM05D003395 ORTHO05D004087 1.2e-212 743.8 561 67.9
Carub.0004s2387 Capsella rubella HOM05D003395 ORTHO05D004087 1.2e-212 743.8 561 66.5
Sabra15G0019300 Salix brachista HOM05D003395 ORTHO05D004087 1.2e-212 743.8 587 65.9
THA.LOC104817509 Tarenaya hassleriana HOM05D003395 ORTHO05D004087 1.2e-212 743.8 560 67.0
AL4G39710 Arabidopsis lyrata HOM05D003395 ORTHO05D004087 2.6e-212 742.7 560 66.2
CARHR136710 Cardamine hirsuta HOM05D003395 ORTHO05D004087 4.4e-212 741.9 560 65.7
Thhalv10016231m.g Eutrema salsugineum HOM05D003395 ORTHO05D004087 9.8e-212 740.7 560 65.7
Lalb_Chr14g0373701 Lupinus albus HOM05D003395 ORTHO05D004087 9.8e-212 740.7 561 67.2
MSTRG.26130 Avicennia marina HOM05D003395 ORTHO05D004087 6.4e-211 738.0 561 67.2
Oeu008171.1 Olea europaea HOM05D003395 ORTHO05D004087 6.4e-211 738.0 570 66.8
Migut.K00101 Erythranthe guttata HOM05D003395 ORTHO05D004087 4.1e-210 735.3 562 67.1
Lj1A1128G63 Lonicera japonica HOM05D003395 ORTHO05D004087 5.4e-210 734.9 537 69.8
Sp4g23860 Schrenkiella parvula HOM05D003395 ORTHO05D004087 7.0e-210 734.6 560 65.5
Lj1A1126G58 Lonicera japonica HOM05D003395 ORTHO05D004087 1.6e-209 733.4 537 69.6
Hma1.2p1_0556F.1_g178050 Hydrangea macrophylla HOM05D003395 ORTHO05D004087 3.5e-209 732.3 548 68.8
MBI13_g36815_MAGBIO Magnolia biondii HOM05D003395 ORTHO05D004087 3.5e-209 732.3 561 67.2
Rhsim04G0105700 Rhododendron simsii HOM05D003395 ORTHO05D004087 2.3e-208 729.6 536 68.7
BcaB06g29192 Brassica carinata HOM05D003395 ORTHO05D004087 3.9e-208 728.8 560 64.5
BcaC02g07302 Brassica carinata HOM05D003395 ORTHO05D004087 1.1e-207 727.2 561 64.7
BolC4t28411H Brassica oleracea HOM05D003395 ORTHO05D004087 1.1e-207 727.2 561 64.7
HanXRQChr04g0125091 Helianthus annuus HOM05D003395 ORTHO05D004087 1.9e-207 726.5 561 66.8
PSO210G1603 Papaver somniferum HOM05D003395 ORTHO05D004087 3.3e-207 725.7 564 66.3
BraA04t18629Z Brassica rapa HOM05D003395 ORTHO05D004087 9.5e-207 724.2 561 64.5
A04p31720 Brassica napus HOM05D003395 ORTHO05D004087 3.6e-206 722.2 561 64.2
ECA236G0559 Erigeron canadensis HOM05D003395 ORTHO05D004087 4.7e-206 721.8 561 65.8
AT3G57350 Arabidopsis thaliana HOM05D003395 ORTHO05D004087 5.2e-205 718.4 561 63.6
PSO210G2967 Papaver somniferum HOM05D003395 ORTHO05D004087 5.2e-205 718.4 564 65.4
Aa31LG1G23630 Aethionema arabicum HOM05D003395 ORTHO05D004087 6.8e-205 718.0 560 64.5
HPP92_001326 Vanilla planifolia HOM05D003395 ORTHO05D004087 6.8e-205 718.0 561 64.0
Ah.13g076590 Amaranthus hybridus HOM05D003395 ORTHO05D004087 2.0e-204 716.5 561 64.9
FAN14G3261 Fragaria x ananassa HOM05D003395 ORTHO05D004087 3.4e-204 715.7 550 67.8
BcaC07g40053 Brassica carinata HOM05D003395 ORTHO05D004087 4.4e-204 715.3 561 63.5
C08p32740 Brassica napus HOM05D003395 ORTHO05D004087 4.4e-204 715.3 561 63.5
BolC8t50885H Brassica oleracea HOM05D003395 ORTHO05D004087 4.4e-204 715.3 561 63.5
EL10Ac3g07130 Beta vulgaris HOM05D003395 ORTHO05D004087 7.5e-204 714.5 560 64.6
AL5G38890 Arabidopsis lyrata HOM05D003395 ORTHO05D004087 9.8e-204 714.1 561 63.5
A09p50250 Brassica napus HOM05D003395 ORTHO05D004087 1.7e-203 713.4 561 63.6
BraA09t40475Z Brassica rapa HOM05D003395 ORTHO05D004087 1.7e-203 713.4 561 63.6
Os03g0349000 Oryza sativa ssp. japonica HOM05D003395 ORTHO05D004087 1.1e-202 710.7 561 64.5
Nitab4.5_0006870g0040 Nicotiana tabacum HOM05D003395 ORTHO05D004087 1.4e-202 710.3 537 68.2
Lsat_1_v5_gn_8_82001 Lactuca sativa HOM05D003395 ORTHO05D004087 1.9e-202 709.9 561 66.1
DCAR_020506 Daucus carota HOM05D003395 ORTHO05D004087 2.4e-202 709.5 543 68.3
Sp5g05250 Schrenkiella parvula HOM05D003395 ORTHO05D004087 2.4e-202 709.5 561 63.6
C04p69140 Brassica napus HOM05D003395 ORTHO05D004087 3.2e-202 709.1 587 61.5
Carub.0005s2420 Capsella rubella HOM05D003395 ORTHO05D004087 4.6e-201 705.3 564 63.3
AUR62026086 Chenopodium quinoa HOM05D003395 ORTHO05D004087 1.6e-198 696.8 536 66.4
ATR0320G031 Amborella trichopoda HOM05D003395 ORTHO05D004087 8.9e-197 691.0 537 65.2
Sc19g0006620 Simmondsia chinensis HOM05D003395 ORTHO05D004087 1.2e-193 680.6 539 65.7
unitig_22.g5792 Utricularia gibba HOM05D003395 ORTHO05D004087 6.6e-192 674.9 563 61.3
FAN09G3838 Fragaria x ananassa HOM05D003395 ORTHO05D004087 1.6e-190 670.2 536 66.6
SEGI_19146 Sequoiadendron giganteum HOM05D003395 ORTHO05D004087 2.1e-190 669.8 560 61.6
Eucgr.K01721 Eucalyptus grandis HOM05D003395 ORTHO05D004087 2.8e-190 669.5 561 61.5
PGSC0003DMG400012709 Solanum tuberosum HOM05D003395 ORTHO05D004087 7.6e-188 661.4 562 62.8
Eucgr.K01765 Eucalyptus grandis HOM05D003395 ORTHO05D004087 1.0e-176 624.4 486 65.8
Zm00001eb016760 Zea mays HOM05D003395 ORTHO05D004087 8.1e-174 614.8 561 57.4
Thhalv10005836m.g Eutrema salsugineum HOM05D003395 ORTHO05D004087 1.1e-173 614.4 561 57.4
MBI13_g36804_MAGBIO Magnolia biondii HOM05D003395 ORTHO05D004087 3.5e-169 599.4 509 63.5
SMO203G0013 Selaginella moellendorffii HOM05D003395 ORTHO05D004087 2.3e-168 596.7 564 55.0
AUR62024500 Chenopodium quinoa HOM05D003395 ORTHO05D004087 2.9e-163 579.7 539 57.5
Mapoly0069s0022 Marchantia polymorpha HOM05D003395 ORTHO05D004087 4.9e-163 578.9 562 53.0
CAN.G624.32 Capsicum annuum HOM05D003395 ORTHO05D004087 2.5e-159 566.6 518 59.5
Pp3c6_19740 Physcomitrium patens HOM05D003395 ORTHO05D004087 1.8e-157 560.5 563 51.9
Prupe.7G054800 Prunus persica HOM05D003395 ORTHO05D004087 3.9e-152 542.7 360 76.1
SGA_v2.0_scaffold94G28494 Striga asiatica HOM05D003395 ORTHO05D004087 7.4e-143 511.9 360 68.9
CDE11G0192 Ceratophyllum demersum HOM05D003395 ORTHO05D004087 1.1e-138 498.0 362 68.8
Gohir.A11G309900 Gossypium hirsutum HOM05D003395 ORTHO05D004087 1.5e-132 477.6 332 72.6
AagrBONN_evm.TU.Sc2ySwM_117.1001 Anthoceros agrestis HOM05D003395 ORTHO05D004087 2.5e-130 470.3 430 56.3
CBR_g4043 Chara braunii HOM05D003395 ORTHO05D004087 4.4e-127 459.5 598 43.1
Eucgr.K01999 Eucalyptus grandis HOM05D003395 ORTHO05D004087 1.0e-120 438.3 318 68.6
Eucgr.K02007 Eucalyptus grandis HOM05D003395 ORTHO05D004087 1.8e-104 384.4 298 66.4
CARHR167540 Cardamine hirsuta HOM05D003395 ORTHO05D004087 2.0e-100 370.9 275 66.5
SHI34713 Sapria himalayana HOM05D003395 ORTHO05D004087 7.0e-93 345.9 287 66.6
FvH4_6g38800 Fragaria vesca HOM05D003395 ORTHO05D004087 7.8e-92 342.4 359 52.6
SHI25400 Sapria himalayana HOM05D003395 ORTHO05D004087 6.6e-83 312.8 311 59.5
RcHm_v2.0_Chr2g0152371 Rosa chinensis HOM05D003395 ORTHO05D004087 8.1e-81 305.8 292 56.2
Cpa.g.sc182.8 Carica papaya HOM05D003395 ORTHO05D004087 3.3e-74 283.9 222 68.0
SHI20623 Sapria himalayana HOM05D003395 ORTHO05D004087 3.2e-69 267.3 252 61.1
SHI34459 Sapria himalayana HOM05D003395 ORTHO05D004087 3.1e-64 250.8 279 52.0
Gohir.A11G310000 Gossypium hirsutum HOM05D003395 ORTHO05D004087 9.9e-63 245.7 173 68.8
SHI27325 Sapria himalayana HOM05D003395 ORTHO05D004087 6.4e-62 243.0 264 55.7
SHI37781 Sapria himalayana HOM05D003395 ORTHO05D004087 1.8e-56 224.9 294 47.3
SHI34448 Sapria himalayana HOM05D003395 ORTHO05D004087 4.5e-55 220.3 206 62.6
SHI33206 Sapria himalayana HOM05D003395 ORTHO05D004087 1.1e-53 215.7 290 49.0
Oeu023127.1 Olea europaea HOM05D003395 ORTHO05D004087 2.4e-53 214.5 228 53.5
Actinidia17665 Actinidia chinensis HOM05D003395 ORTHO05D004087 9.3e-53 212.6 395 38.0
SHI37552 Sapria himalayana HOM05D003395 ORTHO05D004087 4.6e-52 210.3 178 65.2
CDE11G0065 Ceratophyllum demersum HOM05D003395 ORTHO05D004087 5.1e-51 206.8 185 57.8
PGSC0003DMG402030272 Solanum tuberosum HOM05D003395 ORTHO05D004087 1.9e-50 204.9 160 66.9
SHI28043 Sapria himalayana HOM05D003395 ORTHO05D004087 1.1e-48 199.1 213 58.2
Lj3g0025487 Lotus japonicus HOM05D003395 ORTHO05D004087 5.8e-47 193.4 169 62.7
SHI45533 Sapria himalayana HOM05D003395 ORTHO05D004087 5.1e-43 180.3 271 42.8
SHI44367 Sapria himalayana HOM05D003395 ORTHO05D004087 1.9e-42 178.3 271 42.8
AL4G39910 Arabidopsis lyrata HOM05D003395 ORTHO05D004087 1.4e-40 172.2 160 57.5
SHI32287 Sapria himalayana HOM05D003395 ORTHO05D004087 8.4e-38 162.9 108 77.8
SHI32633 Sapria himalayana HOM05D003395 ORTHO05D004087 7.1e-37 159.8 99 79.8
Eucgr.K02008 Eucalyptus grandis HOM05D003395 ORTHO05D004087 1.2e-36 159.1 98 76.5
SHI40120 Sapria himalayana HOM05D003395 ORTHO05D004087 7.4e-34 149.8 103 73.8
SHI32634 Sapria himalayana HOM05D003395 ORTHO05D004087 1.6e-33 148.7 156 57.7
SHI37551 Sapria himalayana HOM05D003395 ORTHO05D004087 4.5e-31 140.6 99 75.8
Cre17.g717800 Chlamydomonas reinhardtii HOM05D003395 ORTHO05D004087 1.7e-30 138.7 664 24.7
SHI40122 Sapria himalayana HOM05D003395 ORTHO05D004087 4.8e-25 120.6 122 55.7
SHI51863 Sapria himalayana HOM05D003395 ORTHO05D004087 1.3e-22 112.5 272 33.8
SHI40121 Sapria himalayana HOM05D003395 ORTHO05D004087 3.8e-22 110.9 70 82.9
SHI17502 Sapria himalayana HOM05D003395 ORTHO05D004087 3.9e-19 100.9 76 67.1
SHI48926 Sapria himalayana HOM05D003395 ORTHO05D004087 5.1e-19 100.5 60 83.3
PRCOL_00003855 Prasinoderma coloniale HOM05D003395 ORTHO05D004087 2.0e-18 98.6 558 26.2
SHI17504 Sapria himalayana HOM05D003395 ORTHO05D004087 5.7e-18 97.1 85 64.7
SHI34458 Sapria himalayana HOM05D003395 ORTHO05D004087 8.2e-17 93.2 62 79.0
RcHm_v2.0_Chr2g0152381 Rosa chinensis HOM05D003395 ORTHO05D004087 2.4e-16 91.7 59 69.5
AagrBONN_evm.TU.Sc2ySwM_117.981 Anthoceros agrestis HOM05D003395 ORTHO05D004087 7.2e-13 80.1 96 49.0
SHI43596 Sapria himalayana HOM05D003395 ORTHO05D004087 1.0e-11 76.3 257 29.6
SHI40123 Sapria himalayana HOM05D003395 ORTHO05D037522 3.3e-10 71.2 53 71.7
SHI37553 Sapria himalayana HOM05D000452 ORTHO05D037522 1.7e-09 68.9 52 73.1
Eucgr.E01623 Eucalyptus grandis HOM05D003395 ORTHO05D004087 3.7e-09 67.8 54 59.3
CARHR254100 Cardamine hirsuta HOM05D003395 ORTHO05D004087 4.8e-09 67.4 53 62.3
SHI32632 Sapria himalayana HOM05D003395 ORTHO05D037522 4.8e-09 67.4 52 78.8
SHI17503 Sapria himalayana HOM05D003395 ORTHO05D004087 1.1e-08 66.2 48 72.9
SHI20624 Sapria himalayana HOM05D003395 ORTHO05D004087 1.2e-07 62.8 76 50.0
Haze_07832 Corylus avellana HOM05D003395 ORTHO05D004087 5.9e-07 60.5 29 86.2
Actinidia17662 Actinidia chinensis HOM05D003395 ORTHO05D004087 7.7e-07 60.1 30 80.0
PGSC0003DMG401030272 Solanum tuberosum HOM05D003395 ORTHO05D004087 7.7e-07 60.1 29 82.8
AagrBONN_evm.TU.Sc2ySwM_117.866 Anthoceros agrestis HOM05D003395 ORTHO05D004087 1.0e-06 59.7 116 35.3


User provided reference genes

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