Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI08751 Sapria himalayana HOM05D005480 ORTHO05D006735 4.7e-231 804.3 442 100.0
Thecc.01G048100 Theobroma cacao HOM05D005480 ORTHO05D006735 2.0e-117 426.8 376 63.6
Dinv39906 Davidia involucrata HOM05D005480 ORTHO05D006735 2.5e-115 419.9 442 57.9
Potri.007G036600 Populus trichocarpa HOM05D005480 ORTHO05D006735 6.2e-114 415.2 394 60.9
Manes.13G130100 Manihot esculenta HOM05D005480 ORTHO05D006735 4.0e-113 412.5 363 63.9
Dinv26753 Davidia involucrata HOM05D005480 ORTHO05D006735 1.2e-112 411.0 323 67.8
CiPaw.01G026500 Carya illinoinensis HOM05D005480 ORTHO05D006735 1.5e-112 410.6 404 59.2
Eucgr.H01972 Eucalyptus grandis HOM05D005480 ORTHO05D006735 6.4e-111 405.2 326 66.0
Lj7A20T61 Lonicera japonica HOM05D005480 ORTHO05D006735 8.3e-111 404.8 402 61.7
CSS0014684 Camellia sinensis var. sinensis HOM05D005480 ORTHO05D006735 1.1e-110 404.4 407 61.9
CsaV3_6G042900 Cucumis sativus L. HOM05D005480 ORTHO05D006735 1.9e-110 403.7 407 58.0
Gohir.A12G068600 Gossypium hirsutum HOM05D005480 ORTHO05D006735 3.2e-110 402.9 413 61.3
QL06p043724 Quercus lobata HOM05D005480 ORTHO05D006735 3.2e-110 402.9 405 58.8
Lj7A18T44 Lonicera japonica HOM05D005480 ORTHO05D006735 7.1e-110 401.7 402 61.2
MELO3C007529.2 Cucumis melo HOM05D005480 ORTHO05D006735 9.2e-110 401.4 401 58.1
Glyma.01G181500 Glycine max HOM05D005480 ORTHO05D006735 1.2e-109 401.0 326 66.3
Glyma.11G059700 Glycine max HOM05D005480 ORTHO05D006735 6.0e-109 398.7 335 64.2
TAR381G0420 Trochodendron aralioides HOM05D005480 ORTHO05D006735 6.0e-109 398.7 322 66.5
Actinidia12077 Actinidia chinensis HOM05D005480 ORTHO05D006735 7.8e-109 398.3 369 65.3
Gorai.008G072400 Gossypium raimondii HOM05D005480 ORTHO05D006735 1.3e-108 397.5 413 60.3
Gohir.D12G090600 Gossypium hirsutum HOM05D005480 ORTHO05D006735 2.3e-108 396.7 413 58.1
Phvul.002G022500 Phaseolus vulgaris HOM05D005480 ORTHO05D006735 2.3e-108 396.7 335 64.2
MD15G1275400 Malus domestica HOM05D005480 ORTHO05D006735 5.1e-108 395.6 447 60.4
CSS0005424 Camellia sinensis var. sinensis HOM05D005480 ORTHO05D006735 6.6e-108 395.2 407 61.4
Sopen02g034920 Solanum pennellii HOM05D005480 ORTHO05D006735 1.1e-107 394.4 407 60.7
Solyc02g090230.4 Solanum lycopersicum HOM05D005480 ORTHO05D006735 1.5e-107 394.0 407 60.4
VMungo1215G2543 Vigna mungo HOM05D005480 ORTHO05D006735 1.5e-107 394.0 335 63.6
MD02G1161300 Malus domestica HOM05D005480 ORTHO05D006735 2.5e-107 393.3 408 58.1
PGSC0003DMG400010074 Solanum tuberosum HOM05D005480 ORTHO05D006735 3.3e-107 392.9 407 60.9
Duzib187G0998 Durio zibethinus HOM05D005480 ORTHO05D006735 7.3e-107 391.7 376 60.4
Rhsim02G0168000 Rhododendron simsii HOM05D005480 ORTHO05D006735 7.3e-107 391.7 397 59.7
Sc03g0001260 Simmondsia chinensis HOM05D005480 ORTHO05D006735 4.7e-106 389.0 401 59.9
TPR.G11349 Trifolium pratense HOM05D005480 ORTHO05D006735 8.1e-106 388.3 425 59.5
DCAR_021432 Daucus carota HOM05D005480 ORTHO05D006735 3.1e-105 386.3 406 58.1
Lj2g0021055 Lotus japonicus HOM05D005480 ORTHO05D006735 3.1e-105 386.3 404 59.7
Prupe.7G142300 Prunus persica HOM05D005480 ORTHO05D006735 4.0e-105 386.0 457 54.9
Ciclev10025487m.g Citrus clementina HOM05D005480 ORTHO05D006735 2.0e-104 383.6 326 64.7
PGR102G0042 Punica granatum HOM05D005480 ORTHO05D006735 5.8e-104 382.1 405 58.3
Medtr5g018390 Medicago truncatula HOM05D005480 ORTHO05D006735 7.6e-104 381.7 419 58.0
TAR625G1062 Trochodendron aralioides HOM05D005480 ORTHO05D006735 9.9e-104 381.3 436 54.8
Sed0026694 Sechium edule HOM05D005480 ORTHO05D006735 2.9e-103 379.8 401 55.4
Ah.02g123950 Amaranthus hybridus HOM05D005480 ORTHO05D006735 1.9e-102 377.1 379 59.6
Lalb_Chr09g0322931 Lupinus albus HOM05D005480 ORTHO05D006735 4.1e-102 375.9 332 63.3
ClCG01G016580 Citrullus lanatus HOM05D005480 ORTHO05D006735 5.4e-102 375.6 462 51.5
Duzib147G0741 Durio zibethinus HOM05D005480 ORTHO05D006735 1.2e-101 374.4 399 57.1
Cc07_g05560 Coffea canephora HOM05D005480 ORTHO05D006735 2.1e-101 373.6 409 55.5
Aqoxy5G01417 Aquilegia oxysepala HOM05D005480 ORTHO05D006735 4.6e-101 372.5 326 61.7
Hma1.2p1_0546F.1_g176180 Hydrangea macrophylla HOM05D005480 ORTHO05D006735 4.6e-101 372.5 412 53.2
FvH4_1g14810 Fragaria vesca HOM05D005480 ORTHO05D006735 1.0e-100 371.3 315 64.4
FAN19G1500 Fragaria x ananassa HOM05D005480 ORTHO05D006735 1.0e-100 371.3 315 64.4
CANSAT01G1679 Cannabis sativa HOM05D005480 ORTHO05D006735 1.3e-100 370.9 404 57.9
Migut.H00485 Erythranthe guttata HOM05D005480 ORTHO05D006735 1.3e-100 370.9 312 63.1
Psat2g164160 Pisum sativum HOM05D005480 ORTHO05D006735 1.3e-100 370.9 323 63.2
FAN23G2977 Fragaria x ananassa HOM05D005480 ORTHO05D006735 1.7e-100 370.5 306 65.0
Nn6g32121 Nelumbo nucifera HOM05D005480 ORTHO05D006735 6.6e-100 368.6 325 63.7
RcHm_v2.0_Chr2g0103771 Rosa chinensis HOM05D005480 ORTHO05D006735 3.3e-99 366.3 407 59.5
PSO170G5089 Papaver somniferum HOM05D005480 ORTHO05D006735 7.3e-99 365.2 367 60.2
FAN28G0426 Fragaria x ananassa HOM05D005480 ORTHO05D006735 1.6e-98 364.0 353 61.8
Cfa004218 Carpinus fangiana HOM05D005480 ORTHO05D006735 3.6e-98 362.8 387 56.8
PSO210G7251 Papaver somniferum HOM05D005480 ORTHO05D006735 4.7e-98 362.5 364 60.7
arahy.Tifrunner.gnm1.ann1.E9URZA Arachis hypogaea HOM05D005480 ORTHO05D006735 1.1e-97 361.3 325 62.5
SGA_v2.0_scaffold15G07231 Striga asiatica HOM05D005480 ORTHO05D006735 2.4e-97 360.1 327 60.2
THA.LOC104819823 Tarenaya hassleriana HOM05D005480 ORTHO05D006735 2.4e-97 360.1 369 57.7
MSTRG.23794 Avicennia marina HOM05D005480 ORTHO05D006735 3.1e-97 359.8 406 53.7
FAN26G2127 Fragaria x ananassa HOM05D005480 ORTHO05D006735 3.1e-97 359.8 350 62.0
ECA232G3160 Erigeron canadensis HOM05D005480 ORTHO05D006735 4.0e-97 359.4 384 54.4
Hund13586 Selenicereus undatus HOM05D005480 ORTHO05D006735 4.4e-96 355.9 325 59.4
COL.COLO4_11327 Corchorus olitorius HOM05D005480 ORTHO05D006735 1.7e-95 354.0 347 59.7
HanXRQChr04g0123741 Helianthus annuus HOM05D005480 ORTHO05D006735 8.4e-95 351.7 397 56.2
Sp7g34650 Schrenkiella parvula HOM05D005480 ORTHO05D006735 3.5e-93 346.3 431 54.5
AT4G37130 Arabidopsis thaliana HOM05D005480 ORTHO05D006735 7.8e-93 345.1 329 59.3
Carub.0007s0332 Capsella rubella HOM05D005480 ORTHO05D006735 7.8e-93 345.1 340 57.9
AL7G13910 Arabidopsis lyrata HOM05D005480 ORTHO05D006735 1.7e-92 344.0 329 58.7
Thhalv10025060m.g Eutrema salsugineum HOM05D005480 ORTHO05D006735 1.5e-91 340.9 369 56.9
Sabra07G0032600 Salix brachista HOM05D005480 ORTHO05D006735 3.3e-91 339.7 341 58.7
vmacro05295 Vaccinium macrocarpon HOM05D005480 ORTHO05D006735 8.1e-90 335.1 284 63.4
Aa31LG6G13860 Aethionema arabicum HOM05D005480 ORTHO05D006735 4.0e-89 332.8 328 57.0
CARHR245380 Cardamine hirsuta HOM05D005480 ORTHO05D006735 6.9e-89 332.0 348 55.7
MBI16_g19897_MAGBIO Magnolia biondii HOM05D005480 ORTHO05D006735 6.9e-89 332.0 374 52.4
Peaxi162Scf00993g00022 Petunia axillaris HOM05D005480 ORTHO05D006735 6.9e-89 332.0 375 58.9
CDE02G2721 Ceratophyllum demersum HOM05D005480 ORTHO05D006735 9.0e-89 331.6 291 62.2
ATR0733G143 Amborella trichopoda HOM05D005480 ORTHO05D006735 1.4e-86 324.3 409 50.4
CDE01G0732 Ceratophyllum demersum HOM05D005480 ORTHO05D006735 1.6e-85 320.9 449 51.4
CAN.G836.34 Capsicum annuum HOM05D005480 ORTHO05D006735 2.7e-85 320.1 386 56.2
A01p01950 Brassica napus HOM05D005480 ORTHO05D006735 3.9e-84 316.2 418 52.9
BraA01t00184Z Brassica rapa HOM05D005480 ORTHO05D006735 3.9e-84 316.2 407 53.3
AUR62003828 Chenopodium quinoa HOM05D005480 ORTHO05D006735 3.9e-84 316.2 367 56.1
Lsat_1_v5_gn_4_179460 Lactuca sativa HOM05D005480 ORTHO05D006735 3.9e-84 316.2 410 52.7
Nitab4.5_0000108g0300 Nicotiana tabacum HOM05D005480 ORTHO05D006735 1.1e-83 314.7 279 62.7
SalBow1G5517 Salvia bowleyana HOM05D006685 ORTHO05D008244 1.1e-83 314.7 278 62.2
unitig_899.g14972 Utricularia gibba HOM05D005480 ORTHO05D006735 1.5e-83 314.3 473 45.2
C01p02120 Brassica napus HOM05D005480 ORTHO05D006735 4.8e-82 309.3 374 55.6
BolC3t20222H Brassica oleracea HOM05D005480 ORTHO05D006735 4.8e-82 309.3 346 56.9
BcaNung03510 Brassica carinata HOM05D005480 ORTHO05D006735 6.2e-82 308.9 375 55.2
BolC1t00204H Brassica oleracea HOM05D005480 ORTHO05D006735 1.1e-81 308.1 374 55.6
BcaB03g12366 Brassica carinata HOM05D005480 ORTHO05D006735 4.0e-81 306.2 437 48.1
Nitab4.5_0001014g0070 Nicotiana tabacum HOM05D005480 ORTHO05D006735 6.9e-81 305.4 375 55.5
Oeu003952.2 Olea europaea HOM05D005480 ORTHO05D006735 2.4e-78 297.0 613 38.0
BcaC01g00434 Brassica carinata HOM05D005480 ORTHO05D006735 7.1e-78 295.4 361 53.5
C03p79710 Brassica napus HOM05D005480 ORTHO05D006735 7.1e-78 295.4 361 53.5
GSVIVG01005079001 Vitis vinifera HOM05D005480 ORTHO05D006735 7.1e-78 295.4 226 68.6
Haze_15193 Corylus avellana HOM05D005480 ORTHO05D006735 7.9e-77 292.0 342 54.1
A08p22500 Brassica napus HOM05D005480 ORTHO05D006735 3.3e-75 286.6 364 49.7
BraA08t34205Z Brassica rapa HOM05D005480 ORTHO05D006735 4.3e-75 286.2 334 50.9
Os09g0453500 Oryza sativa ssp. japonica HOM05D005480 ORTHO05D006735 7.4e-75 285.4 404 48.8
AUR62001975 Chenopodium quinoa HOM05D005480 ORTHO05D006735 3.4e-72 276.6 328 53.7
BcaB03g12364 Brassica carinata HOM05D005480 ORTHO05D006735 3.8e-71 273.1 317 53.0
Lalb_Chr05g0213141 Lupinus albus HOM05D005480 ORTHO05D006735 8.4e-71 271.9 252 59.5
Zm00001eb314700 Zea mays HOM05D005480 ORTHO05D006735 1.9e-70 270.8 289 52.2
Zm00001eb100530 Zea mays HOM05D005480 ORTHO05D006735 1.6e-69 267.7 289 50.2
Ca_24802_v3 Cicer arietinum L. HOM05D005480 ORTHO05D006735 1.8e-68 264.2 248 60.9
AagrBONN_evm.TU.Sc2ySwM_117.4106 Anthoceros agrestis HOM05D005480 ORTHO05D006735 4.1e-65 253.1 341 44.9
arahy.Tifrunner.gnm1.ann1.HXIH5S Arachis hypogaea HOM05D005480 ORTHO05D006735 4.2e-62 243.0 356 46.9
Mapoly0027s0041 Marchantia polymorpha HOM05D005480 ORTHO05D006735 1.1e-57 228.4 413 38.7
Pp3c24_6760 Physcomitrium patens HOM05D005480 ORTHO05D006735 1.5e-56 224.6 330 42.7
HPP92_016040 Vanilla planifolia HOM05D005480 ORTHO05D006735 7.4e-51 205.7 203 53.2
SGA_v2.0_scaffold135G34951 Striga asiatica HOM05D005480 ORTHO05D006735 2.8e-50 203.8 366 42.6
Ah.03g144040 Amaranthus hybridus HOM05D005480 ORTHO05D006735 9.4e-46 188.7 229 45.9
SEGI_40098 Sequoiadendron giganteum HOM05D005480 ORTHO05D006735 4.7e-45 186.4 213 51.2
CBR_g66690 Chara braunii HOM05D005480 ORTHO05D006735 5.0e-39 166.4 407 35.1
Os03g0765400 Oryza sativa ssp. japonica HOM05D005480 ORTHO05D006735 3.0e-36 157.1 372 35.5
Mapoly0016s0112 Marchantia polymorpha HOM05D005480 ORTHO05D006735 9.1e-33 145.6 292 32.5
Psat5g148720 Pisum sativum HOM05D005480 ORTHO05D006735 1.2e-27 128.6 121 60.3
Cpa.g.c44085 Carica papaya HOM05D005480 ORTHO05D006735 9.4e-22 109.0 168 44.6
Sabra07G0032900 Salix brachista HOM05D005480 ORTHO05D006735 1.5e-19 101.7 149 50.3
Sabra07G0033100 Salix brachista HOM05D005480 ORTHO05D006735 1.5e-19 101.7 149 50.3
Sabra07G0033400 Salix brachista HOM05D005480 ORTHO05D006735 2.0e-19 101.3 154 49.4
HPP92_016039 Vanilla planifolia HOM05D005480 ORTHO05D006735 3.5e-16 90.5 74 64.9
Ah.03g144030 Amaranthus hybridus HOM05D005480 ORTHO05D006735 2.5e-14 84.3 84 53.6
Cre16.g685217 Chlamydomonas reinhardtii HOM05D005480 ORTHO05D006735 1.0e-07 62.4 308 25.6
BcaC02g10502 Brassica carinata HOM05D005480 ORTHO05D006735 1.7e-07 61.6 44 63.6
C04p28170 Brassica napus HOM05D005480 ORTHO05D006735 1.7e-07 61.6 44 63.6
BolC4t24360H Brassica oleracea HOM05D005480 ORTHO05D006735 1.7e-07 61.6 44 63.6


User provided reference genes

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