Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI08705 Sapria himalayana HOM05D000268 ORTHO05D004469 7.3e-65 250.4 123 100.0
QL06p044462 Quercus lobata HOM05D000268 ORTHO05D004469 9.3e-36 153.7 115 62.6
Haze_15153 Corylus avellana HOM05D000268 ORTHO05D004469 4.6e-35 151.4 115 62.6
Manes.13G134300 Manihot esculenta HOM05D000268 ORTHO05D004469 4.6e-35 151.4 115 63.5
CSS0018552 Camellia sinensis var. sinensis HOM05D000268 ORTHO05D004469 6.0e-35 151.0 115 60.0
Gohir.A02G162200 Gossypium hirsutum HOM05D000268 ORTHO05D004469 7.9e-35 150.6 115 61.7
Gorai.003G018700 Gossypium raimondii HOM05D000268 ORTHO05D004469 7.9e-35 150.6 115 61.7
CSS0040273 Camellia sinensis var. sinensis HOM05D000268 ORTHO05D004469 1.3e-34 149.8 115 59.1
Atru.chr3.486 Acer truncatum HOM05D000268 ORTHO05D004469 2.3e-34 149.1 115 62.6
Gohir.D03G018200 Gossypium hirsutum HOM05D000268 ORTHO05D004469 2.3e-34 149.1 115 61.7
Ciclev10024695m.g Citrus clementina HOM05D000268 ORTHO05D004469 5.1e-34 147.9 115 61.7
CiPaw.02G013900 Carya illinoinensis HOM05D000268 ORTHO05D004469 8.7e-34 147.1 115 60.9
Sabra05G0105100 Salix brachista HOM05D000268 ORTHO05D004469 1.9e-33 146.0 115 61.7
CiPaw.01G030400 Carya illinoinensis HOM05D000268 ORTHO05D004469 3.3e-33 145.2 115 61.7
CANSAT01G2579 Cannabis sativa HOM05D000268 ORTHO05D004469 4.3e-33 144.8 115 61.7
Lalb_Chr05g0227191 Lupinus albus HOM05D000268 ORTHO05D004469 5.6e-33 144.4 115 60.0
ClCG01G016320 Citrullus lanatus HOM05D000268 ORTHO05D004469 7.4e-33 144.1 115 55.7
Duzib264G0212 Durio zibethinus HOM05D000268 ORTHO05D004469 9.6e-33 143.7 115 59.1
Thecc.01G044200 Theobroma cacao HOM05D000268 ORTHO05D004469 9.6e-33 143.7 115 58.3
TWI73G0223 Tripterygium wilfordii HOM05D000268 ORTHO05D004469 9.6e-33 143.7 115 60.9
Dinv39934 Davidia involucrata HOM05D000268 ORTHO05D004469 2.1e-32 142.5 115 58.3
Potri.005G129800 Populus trichocarpa HOM05D000268 ORTHO05D004469 2.8e-32 142.1 115 60.0
MELO3C007503.2 Cucumis melo HOM05D000268 ORTHO05D004469 3.7e-32 141.7 115 55.7
CsaV3_6G042640 Cucumis sativus L. HOM05D000268 ORTHO05D004469 8.2e-32 140.6 115 54.8
Glyma.11G062100 Glycine max HOM05D000268 ORTHO05D004469 8.2e-32 140.6 115 59.1
Potri.007G033000 Populus trichocarpa HOM05D000268 ORTHO05D004469 8.2e-32 140.6 118 58.5
Gorai.003G018800 Gossypium raimondii HOM05D000268 ORTHO05D004469 1.1e-31 140.2 110 60.9
Gohir.A02G162100 Gossypium hirsutum HOM05D000268 ORTHO05D004469 1.4e-31 139.8 115 57.4
Actinidia12097 Actinidia chinensis HOM05D000268 ORTHO05D004469 1.8e-31 139.4 115 57.4
FvH4_1g14350 Fragaria vesca HOM05D000268 ORTHO05D004469 3.1e-31 138.7 115 58.3
FAN19G2782 Fragaria x ananassa HOM05D000268 ORTHO05D004469 3.1e-31 138.7 115 58.3
Lalb_Chr05g0213051 Lupinus albus HOM05D000268 ORTHO05D004469 4.0e-31 138.3 115 57.4
Prupe.7G146600 Prunus persica HOM05D000268 ORTHO05D004469 4.0e-31 138.3 115 58.3
FAN28G1810 Fragaria x ananassa HOM05D000268 ORTHO05D004469 9.0e-31 137.1 115 57.4
GSVIVG01019046001 Vitis vinifera HOM05D000268 ORTHO05D004469 9.0e-31 137.1 115 57.4
COL.COLO4_22162 Corchorus olitorius HOM05D000268 ORTHO05D004469 2.6e-30 135.6 106 61.3
MD15G1271600 Malus domestica HOM05D000268 ORTHO05D004469 2.6e-30 135.6 115 56.5
Sabra07G0028900 Salix brachista HOM05D000268 ORTHO05D004469 2.6e-30 135.6 118 57.6
FAN26G3224 Fragaria x ananassa HOM05D000268 ORTHO05D004469 3.4e-30 135.2 113 58.4
Nn1g05132 Nelumbo nucifera HOM05D000268 ORTHO05D004469 3.4e-30 135.2 115 57.4
Phvul.002G024600 Phaseolus vulgaris HOM05D000268 ORTHO05D004469 3.4e-30 135.2 115 55.7
TAR625G1531 Trochodendron aralioides HOM05D000268 ORTHO05D004469 3.4e-30 135.2 115 55.7
arahy.Tifrunner.gnm1.ann1.ISY5ET Arachis hypogaea HOM05D000268 ORTHO05D004469 4.5e-30 134.8 115 59.1
Glyma.16G143100 Glycine max HOM05D000268 ORTHO05D004469 4.5e-30 134.8 115 55.7
MD02G1157000 Malus domestica HOM05D000268 ORTHO05D004469 5.8e-30 134.4 115 55.7
Glyma.01G180100 Glycine max HOM05D000268 ORTHO05D004469 7.6e-30 134.0 115 56.5
Ca_24816_v3 Cicer arietinum L. HOM05D000268 ORTHO05D004469 1.0e-29 133.7 115 55.7
FAN23G1146 Fragaria x ananassa HOM05D000268 ORTHO05D004469 1.0e-29 133.7 115 57.4
MSTRG.23812 Avicennia marina HOM05D000268 ORTHO05D004469 1.7e-29 132.9 115 56.5
Lj2g0022074 Lotus japonicus HOM05D000268 ORTHO05D004469 1.7e-29 132.9 115 54.8
Medtr5g018850 Medicago truncatula HOM05D000268 ORTHO05D004469 1.7e-29 132.9 115 55.7
TAR381G1430 Trochodendron aralioides HOM05D000268 ORTHO05D004469 1.7e-29 132.9 115 53.9
Actinidia36535 Actinidia chinensis HOM05D000268 ORTHO05D004469 2.2e-29 132.5 115 54.8
PGR102G2765 Punica granatum HOM05D000268 ORTHO05D004469 2.9e-29 132.1 115 53.0
Glyma.02G060500 Glycine max HOM05D000268 ORTHO05D004469 4.9e-29 131.3 115 54.8
ECA232G0911 Erigeron canadensis HOM05D000268 ORTHO05D004469 6.5e-29 131.0 115 53.0
Thhalv10000012m.g Eutrema salsugineum HOM05D000268 ORTHO05D004469 8.4e-29 130.6 113 53.1
SGA_v2.0_scaffold15G07183 Striga asiatica HOM05D000268 ORTHO05D004469 8.4e-29 130.6 112 56.2
RcHm_v2.0_Chr2g0103021 Rosa chinensis HOM05D000268 ORTHO05D004469 1.1e-28 130.2 115 56.5
TPR.G29867 Trifolium pratense HOM05D000268 ORTHO05D004469 1.9e-28 129.4 115 53.9
VMungo1215G1516 Vigna mungo HOM05D000268 ORTHO05D004469 3.2e-28 128.6 115 53.0
DCAR_010955 Daucus carota HOM05D000268 ORTHO05D004469 4.2e-28 128.3 115 53.0
Migut.H00513 Erythranthe guttata HOM05D000268 ORTHO05D004469 1.2e-27 126.7 115 53.9
A04p18100 Brassica napus HOM05D000268 ORTHO05D004469 1.6e-27 126.3 113 52.2
Sp4g02670 Schrenkiella parvula HOM05D000268 ORTHO05D004469 1.6e-27 126.3 113 53.1
vmacro05281 Vaccinium macrocarpon HOM05D000268 ORTHO05D004469 1.6e-27 126.3 115 53.0
BraA04t17428Z Brassica rapa HOM05D000268 ORTHO05D004469 2.1e-27 125.9 113 52.2
Oeu027318.1 Olea europaea HOM05D000268 ORTHO05D004469 2.7e-27 125.6 115 54.8
BcaB06g27931 Brassica carinata HOM05D000268 ORTHO05D004469 4.6e-27 124.8 113 53.1
BcaC02g08548 Brassica carinata HOM05D000268 ORTHO05D004469 4.6e-27 124.8 113 51.3
C04p53050 Brassica napus HOM05D000268 ORTHO05D004469 4.6e-27 124.8 113 51.3
BolC4t26866H Brassica oleracea HOM05D000268 ORTHO05D004469 4.6e-27 124.8 113 51.3
HanXRQChr09g0265141 Helianthus annuus HOM05D000268 ORTHO05D004469 6.0e-27 124.4 115 47.8
SalBow1G1781 Salvia bowleyana HOM05D000268 ORTHO05D004469 6.0e-27 124.4 115 55.7
Psat2g163120 Pisum sativum HOM05D000268 ORTHO05D004469 7.9e-27 124.0 115 53.0
Hund14126 Selenicereus undatus HOM05D000268 ORTHO05D004469 1.0e-26 123.6 113 49.6
Aa31LG7G13140 Aethionema arabicum HOM05D000268 ORTHO05D004469 1.3e-26 123.2 120 47.5
Medtr4g132610 Medicago truncatula HOM05D000268 ORTHO05D004469 2.3e-26 122.5 115 48.7
Rhsim10G0122500 Rhododendron simsii HOM05D000268 ORTHO05D004469 5.1e-26 121.3 115 50.4
Medtr8g078490 Medicago truncatula HOM05D000268 ORTHO05D004469 6.7e-26 120.9 115 50.4
MBI16_g10970_MAGBIO Magnolia biondii HOM05D000268 ORTHO05D004469 8.7e-26 120.6 117 48.7
THA.LOC104807561 Tarenaya hassleriana HOM05D000268 ORTHO05D004469 8.7e-26 120.6 115 51.3
arahy.Tifrunner.gnm1.ann1.GI7SC3 Arachis hypogaea HOM05D000268 ORTHO05D004469 1.1e-25 120.2 131 48.1
Oeu027319.1 Olea europaea HOM05D000268 ORTHO05D004469 1.1e-25 120.2 115 51.3
Lsat_1_v5_gn_4_176280 Lactuca sativa HOM05D000268 ORTHO05D004469 1.5e-25 119.8 115 47.8
Lj3g0021520 Lotus japonicus HOM05D000268 ORTHO05D004469 1.5e-25 119.8 115 51.3
Ah.02g126300 Amaranthus hybridus HOM05D000268 ORTHO05D004469 1.9e-25 119.4 115 47.0
EL10Ac6g14864 Beta vulgaris HOM05D000268 ORTHO05D004469 4.3e-25 118.2 115 47.0
Sc03g0001070 Simmondsia chinensis HOM05D000268 ORTHO05D004469 4.3e-25 118.2 110 49.1
unitig_736.g22253 Utricularia gibba HOM05D000268 ORTHO05D004469 9.7e-25 117.1 115 52.2
AT2G23740 Arabidopsis thaliana HOM05D000268 ORTHO05D004469 2.2e-24 115.9 113 49.6
Lj4g0005897 Lotus japonicus HOM05D000268 ORTHO05D004469 2.2e-24 115.9 115 49.6
Psat4g090200 Pisum sativum HOM05D000268 ORTHO05D004469 2.2e-24 115.9 115 46.1
TPR.G31559 Trifolium pratense HOM05D000268 ORTHO05D004469 2.2e-24 115.9 115 47.8
ATR0733G136 Amborella trichopoda HOM05D000268 ORTHO05D004469 2.8e-24 115.5 117 47.0
Carub.0004s0292 Capsella rubella HOM05D000268 ORTHO05D004469 4.8e-24 114.8 113 48.7
arahy.Tifrunner.gnm1.ann1.259MTB Arachis hypogaea HOM05D000268 ORTHO05D004469 8.2e-24 114.0 131 46.6
Peaxi162Scf00535g00417 Petunia axillaris HOM05D000268 ORTHO05D004469 1.1e-23 113.6 144 43.1
Solyc02g089970.3 Solanum lycopersicum HOM05D000268 ORTHO05D004469 1.1e-23 113.6 115 48.7
unitig_899.g15136 Utricularia gibba HOM05D000268 ORTHO05D004469 1.1e-23 113.6 117 50.4
Sopen02g034660 Solanum pennellii HOM05D000268 ORTHO05D004469 1.8e-23 112.8 115 47.8
AL4G13740 Arabidopsis lyrata HOM05D000268 ORTHO05D004469 2.4e-23 112.5 113 46.9
SEGI_11374 Sequoiadendron giganteum HOM05D000268 ORTHO05D004469 4.1e-23 111.7 118 46.6
CARHR114610 Cardamine hirsuta HOM05D000268 ORTHO05D004469 5.3e-23 111.3 113 48.7
Zm00001eb252300 Zea mays HOM05D000268 ORTHO05D004469 9.0e-23 110.5 105 48.6
AUR62008036 Chenopodium quinoa HOM05D000268 ORTHO05D004469 1.2e-22 110.2 134 41.8
AUR62003214 Chenopodium quinoa HOM05D000268 ORTHO05D004469 2.0e-22 109.4 134 41.8
Nitab4.5_0000483g0060 Nicotiana tabacum HOM05D000268 ORTHO05D004469 2.0e-22 109.4 115 47.8
Zm00001eb188560 Zea mays HOM05D000268 ORTHO05D004469 2.0e-22 109.4 108 46.3
Aqoxy5G01732 Aquilegia oxysepala HOM05D000268 ORTHO05D004469 2.6e-22 109.0 115 46.1
Lj4g0026497 Lotus japonicus HOM05D000268 ORTHO05D004469 4.5e-22 108.2 113 47.8
HPP92_007810 Vanilla planifolia HOM05D000268 ORTHO05D004469 4.5e-22 108.2 107 47.7
PSO170G1741 Papaver somniferum HOM05D000268 ORTHO05D004469 5.9e-22 107.8 115 45.2
PSO700G0125 Papaver somniferum HOM05D000268 ORTHO05D004469 7.6e-22 107.5 115 46.1
CAN.G836.12 Capsicum annuum HOM05D000268 ORTHO05D004469 1.1e-20 103.6 115 46.1
arahy.Tifrunner.gnm1.ann1.12AQES Arachis hypogaea HOM05D000268 ORTHO05D004469 1.9e-20 102.8 174 40.8
Lj7C14G2 Lonicera japonica HOM05D000268 ORTHO05D004469 5.5e-20 101.3 78 61.5
Duzib187G0333 Durio zibethinus HOM05D000268 ORTHO05D004469 2.1e-19 99.4 83 56.6
Actinidia04606 Actinidia chinensis HOM05D000268 ORTHO05D004469 1.4e-18 96.7 77 58.4
Ca_22239_v3 Cicer arietinum L. HOM05D000268 ORTHO05D004469 1.8e-18 96.3 87 57.5
Gohir.D03G018350 Gossypium hirsutum HOM05D000268 ORTHO05D004469 2.3e-18 95.9 72 62.5
Sed0027730 Sechium edule HOM05D000268 ORTHO05D004469 1.3e-16 90.1 67 58.2
Nitab4.5_0004932g0040 Nicotiana tabacum HOM05D000268 ORTHO05D004469 3.7e-16 88.6 113 41.6
Mapoly0003s0206 Marchantia polymorpha HOM05D000268 ORTHO05D004469 1.7e-13 79.7 109 38.5
Os02g0708500 Oryza sativa ssp. japonica HOM05D000268 ORTHO05D004469 1.1e-12 77.0 71 52.1
Lj4g0020969 Lotus japonicus HOM05D000268 ORTHO05D004469 1.4e-12 76.6 77 49.4
SEGI_19185 Sequoiadendron giganteum HOM05D000268 ORTHO05D004469 5.5e-12 74.7 108 38.9
Cpa.g.sc6035.1 Carica papaya HOM05D000268 ORTHO05D004469 7.2e-12 74.3 52 63.5
AagrBONN_evm.TU.Sc2ySwM_368.772 Anthoceros agrestis HOM05D000268 ORTHO05D004469 1.6e-11 73.2 109 35.8
Pp3c22_17280 Physcomitrium patens HOM05D000268 ORTHO05D004469 1.6e-11 73.2 101 36.6
Pp3c19_9880 Physcomitrium patens HOM05D000268 ORTHO05D004469 1.0e-10 70.5 106 34.0
Pp3c19_9910 Physcomitrium patens HOM05D000268 ORTHO05D004469 1.0e-10 70.5 106 34.0


User provided reference genes

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