Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI07967 Sapria himalayana HOM05D001537 ORTHO05D002595 1.0e-32 142.9 78 100.0
Gohir.D05G181650 Gossypium hirsutum HOM05D001537 ORTHO05D002595 1.0e-19 99.8 52 86.5
Lalb_Chr03g0033681 Lupinus albus HOM05D001537 ORTHO05D002595 2.9e-19 98.2 52 82.7
Thecc.08G061900 Theobroma cacao HOM05D001537 ORTHO05D002595 5.0e-19 97.4 52 80.8
arahy.Tifrunner.gnm1.ann1.74ZX0A Arachis hypogaea HOM05D001537 ORTHO05D002595 6.6e-19 97.1 52 80.8
arahy.Tifrunner.gnm1.ann1.UA1BSP Arachis hypogaea HOM05D001537 ORTHO05D002595 6.6e-19 97.1 52 80.8
Gohir.A05G178300 Gossypium hirsutum HOM05D001537 ORTHO05D002595 8.6e-19 96.7 49 87.8
Gorai.009G186700 Gossypium raimondii HOM05D001537 ORTHO05D002595 8.6e-19 96.7 49 87.8
Lj5g0001846 Lotus japonicus HOM05D001537 ORTHO05D002595 8.6e-19 96.7 52 82.7
Sed0022111 Sechium edule HOM05D001537 ORTHO05D002595 1.5e-18 95.9 52 78.8
Ciclev10000045m.g Citrus clementina HOM05D001537 ORTHO05D002595 1.9e-18 95.5 52 80.8
ClCG11G018810 Citrullus lanatus HOM05D001537 ORTHO05D002595 2.5e-18 95.1 52 78.8
MELO3C017033.2 Cucumis melo HOM05D001537 ORTHO05D002595 3.3e-18 94.7 52 78.8
CsaV3_4G037380 Cucumis sativus L. HOM05D001537 ORTHO05D002595 3.3e-18 94.7 52 78.8
Duzib093G0377 Durio zibethinus HOM05D001537 ORTHO05D002595 3.3e-18 94.7 49 87.8
PGR031G0149 Punica granatum HOM05D001537 ORTHO05D002595 3.3e-18 94.7 52 76.9
Manes.18G003801 Manihot esculenta HOM05D001537 ORTHO05D002595 5.5e-18 94.0 52 80.8
CiPaw.07G136300 Carya illinoinensis HOM05D001537 ORTHO05D002595 7.2e-18 93.6 52 76.9
Psat6g000440 Pisum sativum HOM05D001537 ORTHO05D002595 7.2e-18 93.6 52 76.9
GSVIVG01013389001 Vitis vinifera HOM05D001537 ORTHO05D002595 7.2e-18 93.6 52 80.8
Atru.chr13.115 Acer truncatum HOM05D001537 ORTHO05D002595 9.5e-18 93.2 52 76.9
Haze_22823 Corylus avellana HOM05D001537 ORTHO05D002595 1.2e-17 92.8 52 76.9
QL02p014921 Quercus lobata HOM05D001537 ORTHO05D002595 1.2e-17 92.8 52 76.9
Ca_14544_v3 Cicer arietinum L. HOM05D001537 ORTHO05D002595 1.6e-17 92.4 52 75.0
Potri.002G008700 Populus trichocarpa HOM05D001537 ORTHO05D002595 1.6e-17 92.4 52 76.9
Sabra02G0006500 Salix brachista HOM05D001537 ORTHO05D002595 1.6e-17 92.4 52 76.9
TPR.G26381 Trifolium pratense HOM05D001537 ORTHO05D002595 2.1e-17 92.0 52 75.0
Glyma.14G223700 Glycine max HOM05D001537 ORTHO05D002595 2.8e-17 91.7 52 75.0
Phvul.001G000600 Phaseolus vulgaris HOM05D001537 ORTHO05D002595 2.8e-17 91.7 52 75.0
VMungo0647G0902 Vigna mungo HOM05D001537 ORTHO05D002595 2.8e-17 91.7 52 75.0
Eucgr.F03572 Eucalyptus grandis HOM05D001537 ORTHO05D002595 6.1e-17 90.5 49 81.6
CANSAT25G3097 Cannabis sativa HOM05D001537 ORTHO05D002595 8.0e-17 90.1 49 79.6
RcHm_v2.0_Chr7g0215861 Rosa chinensis HOM05D001537 ORTHO05D002595 1.4e-16 89.4 52 69.2
Actinidia17058 Actinidia chinensis HOM05D001537 ORTHO05D002595 2.3e-16 88.6 52 71.2
Medtr1g026490 Medicago truncatula HOM05D001537 ORTHO05D002595 2.3e-16 88.6 52 71.2
Rhsim06G0005400 Rhododendron simsii HOM05D001537 ORTHO05D002595 2.3e-16 88.6 52 71.2
TWI56G1355 Tripterygium wilfordii HOM05D001537 ORTHO05D002595 2.3e-16 88.6 52 71.2
vmacro21795 Vaccinium macrocarpon HOM05D001537 ORTHO05D002595 3.0e-16 88.2 49 79.6
Cpa.g.sc26.168 Carica papaya HOM05D001537 ORTHO05D002595 4.0e-16 87.8 52 73.1
FvH4_5g25570 Fragaria vesca HOM05D001537 ORTHO05D002595 4.0e-16 87.8 52 67.3
FAN08G0357 Fragaria x ananassa HOM05D001537 ORTHO05D002595 4.0e-16 87.8 52 67.3
FAN13G0321 Fragaria x ananassa HOM05D001537 ORTHO05D002595 4.0e-16 87.8 52 67.3
FAN18G0587 Fragaria x ananassa HOM05D001537 ORTHO05D002595 4.0e-16 87.8 52 67.3
Prupe.5G009400 Prunus persica HOM05D001537 ORTHO05D002595 4.0e-16 87.8 52 67.3
Lj4A808G42 Lonicera japonica HOM05D001537 ORTHO05D002595 5.2e-16 87.4 52 71.2
MD16G1283500 Malus domestica HOM05D001537 ORTHO05D002595 5.2e-16 87.4 49 71.4
Sc15g0004240 Simmondsia chinensis HOM05D001537 ORTHO05D002595 5.2e-16 87.4 52 73.1
EL10Ac1g01914 Beta vulgaris HOM05D001537 ORTHO05D002595 1.2e-15 86.3 51 70.6
Ca_25241_v3 Cicer arietinum L. HOM05D001537 ORTHO05D002595 1.2e-15 86.3 52 69.2
CSS0018686 Camellia sinensis var. sinensis HOM05D001537 ORTHO05D002595 2.0e-15 85.5 52 71.2
MBI05_g14353_MAGBIO Magnolia biondii HOM05D001537 ORTHO05D002595 2.6e-15 85.1 52 71.2
DCAR_022967 Daucus carota HOM05D001537 ORTHO05D002595 3.4e-15 84.7 52 69.2
CAN.G641.47 Capsicum annuum HOM05D001537 ORTHO05D002595 4.4e-15 84.3 52 67.3
Oeu029250.4 Olea europaea HOM05D001537 ORTHO05D002595 5.7e-15 84.0 52 71.2
Peaxi162Scf01445g00129 Petunia axillaris HOM05D001537 ORTHO05D002595 5.7e-15 84.0 52 69.2
TAR628G1618 Trochodendron aralioides HOM05D001537 ORTHO05D002595 5.7e-15 84.0 49 71.4
Ah.11g041620 Amaranthus hybridus HOM05D001537 ORTHO05D002595 7.5e-15 83.6 52 65.4
Nitab4.5_0004356g0020 Nicotiana tabacum HOM05D001537 ORTHO05D002595 9.8e-15 83.2 52 67.3
Solyc10g079510.3 Solanum lycopersicum HOM05D001537 ORTHO05D002595 9.8e-15 83.2 52 63.5
Sopen10g030160 Solanum pennellii HOM05D001537 ORTHO05D002595 1.7e-14 82.4 52 61.5
Cc00_g25330 Coffea canephora HOM05D001537 ORTHO05D002595 3.7e-14 81.3 52 67.3
Migut.O00316 Erythranthe guttata HOM05D001537 ORTHO05D002595 3.7e-14 81.3 52 61.5
SMO340G0319 Selaginella moellendorffii HOM05D001537 ORTHO05D002595 6.3e-14 80.5 52 67.3
MELO3C017034.2 Cucumis melo HOM05D001537 ORTHO05D002595 8.3e-14 80.1 52 67.3
Os09g0551800 Oryza sativa ssp. japonica HOM05D001537 ORTHO05D002595 8.3e-14 80.1 52 61.5
Sp1g18450 Schrenkiella parvula HOM05D001537 ORTHO05D002595 8.3e-14 80.1 50 66.0
HPP92_025944 Vanilla planifolia HOM05D001537 ORTHO05D002595 8.3e-14 80.1 52 65.4
MSTRG.987 Avicennia marina HOM05D001537 ORTHO05D002595 1.1e-13 79.7 52 65.4
SalBow1G3777 Salvia bowleyana HOM05D001537 ORTHO05D002595 1.4e-13 79.3 52 61.5
CsaV3_4G037390 Cucumis sativus L. HOM05D001537 ORTHO05D002595 1.8e-13 79.0 52 65.4
AagrBONN_evm.TU.Sc2ySwM_228.1620 Anthoceros agrestis HOM05D001537 ORTHO05D002595 2.4e-13 78.6 52 61.5
Thhalv10006615m.g Eutrema salsugineum HOM05D001537 ORTHO05D002595 3.2e-13 78.2 49 65.3
SEGI_30799 Sequoiadendron giganteum HOM05D001537 ORTHO05D002595 3.2e-13 78.2 52 63.5
SGA_v2.0_scaffold235G43685 Striga asiatica HOM05D001537 ORTHO05D002595 3.2e-13 78.2 52 59.6
THA.LOC104811474 Tarenaya hassleriana HOM05D001537 ORTHO05D002595 3.2e-13 78.2 49 65.3
Aqoxy5G01007 Aquilegia oxysepala HOM05D001537 ORTHO05D002595 5.4e-13 77.4 52 63.5
Aa31LG7G4910 Aethionema arabicum HOM05D001537 ORTHO05D002595 7.0e-13 77.0 49 63.3
Carub.0001s2019 Capsella rubella HOM05D001537 ORTHO05D002595 7.0e-13 77.0 49 63.3
COL.COLO4_07212 Corchorus olitorius HOM05D001537 ORTHO05D002595 9.2e-13 76.6 45 68.9
PSO210G4823 Papaver somniferum HOM05D001537 ORTHO05D002595 9.2e-13 76.6 52 61.5
BcaC08g44429 Brassica carinata HOM05D001537 ORTHO05D002595 1.2e-12 76.3 49 63.3
Zm00001eb320860 Zea mays HOM05D001537 ORTHO05D002595 1.2e-12 76.3 50 60.0
C05p19320 Brassica napus HOM05D001537 ORTHO05D002595 1.6e-12 75.9 49 61.2
BolC5t30633H Brassica oleracea HOM05D001537 ORTHO05D002595 1.6e-12 75.9 49 61.2
Pp3c10_650 Physcomitrium patens HOM05D001537 ORTHO05D002595 1.6e-12 75.9 52 57.7
AL1G33710 Arabidopsis lyrata HOM05D001537 ORTHO05D002595 2.0e-12 75.5 49 61.2
AT1G20720 Arabidopsis thaliana HOM05D001537 ORTHO05D002595 2.0e-12 75.5 49 61.2
A06p16720 Brassica napus HOM05D001537 ORTHO05D002595 2.0e-12 75.5 49 61.2
BraA06t24777Z Brassica rapa HOM05D001537 ORTHO05D002595 2.0e-12 75.5 49 61.2
BraA03t11614Z Brassica rapa HOM05D001537 ORTHO05D002595 3.5e-12 74.7 49 59.2
ATR0807G057 Amborella trichopoda HOM05D001537 ORTHO05D002595 4.6e-12 74.3 50 60.0
Lsat_1_v5_gn_2_860 Lactuca sativa HOM05D001537 ORTHO05D002595 4.6e-12 74.3 52 59.6
Hund01784 Selenicereus undatus HOM05D001537 ORTHO05D002595 4.6e-12 74.3 44 68.2
Nn6g31690 Nelumbo nucifera HOM05D001537 ORTHO05D002595 7.8e-12 73.6 52 57.7
Nitab4.5_0000486g0210 Nicotiana tabacum HOM05D001537 ORTHO05D002595 1.0e-11 73.2 44 70.5
CBR_g12297 Chara braunii HOM05D001537 ORTHO05D000353 2.3e-11 72.0 52 55.8
ECA238G0307 Erigeron canadensis HOM05D001537 ORTHO05D002595 2.3e-11 72.0 52 57.7
C07p11360 Brassica napus HOM05D001537 ORTHO05D021960 2.9e-11 71.6 49 59.2
HanXRQChr06g0185191 Helianthus annuus HOM05D001537 ORTHO05D002595 2.9e-11 71.6 52 57.7
MCO16G142 Micromonas commoda HOM05D001537 ORTHO05D002595 2.9e-11 71.6 49 55.1
HanXRQChr06g0185181 Helianthus annuus HOM05D001537 ORTHO05D002595 5.0e-11 70.9 52 53.8
PGSC0003DMG400042352 Solanum tuberosum HOM05D001537 ORTHO05D002595 7.3e-10 67.0 44 63.6
AL1G33740 Arabidopsis lyrata HOM05D001537 ORTHO05D002595 3.6e-09 64.7 49 59.2
Carub.0001s2020 Capsella rubella HOM05D001537 ORTHO05D002595 2.3e-08 62.0 49 57.1
Cre09.g397350 Chlamydomonas reinhardtii HOM05D001537 ORTHO05D002595 4.0e-08 61.2 46 47.8
CARHR021190 Cardamine hirsuta HOM05D001537 ORTHO05D002595 8.9e-08 60.1 49 55.1
Glyma.03G264902 Glycine max HOM05D003389 ORTHO05D003917 2.6e-07 58.5 35 65.7
Glyma.14G000050 Glycine max HOM05D001537 ORTHO05D002595 2.6e-07 58.5 35 65.7
A09p12720 Brassica napus HOM05D001537 ORTHO05D002595 1.7e-06 55.8 50 50.0
BolC9t54411H Brassica oleracea HOM05D001537 ORTHO05D002595 2.2e-06 55.5 50 50.0
BraA09t36916Z Brassica rapa HOM05D001537 ORTHO05D002595 2.2e-06 55.5 50 50.0
BcaC04g22810 Brassica carinata HOM05D001537 ORTHO05D002595 4.9e-06 54.3 48 50.0
C09p15070 Brassica napus HOM05D001537 ORTHO05D002595 4.9e-06 54.3 48 50.0


User provided reference genes

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