Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI06325 Sapria himalayana HOM05D001470 ORTHO05D006430 0.0e+00 1137.9 552 100.0
Lj7C346G4 Lonicera japonica HOM05D001470 ORTHO05D006430 9.7e-24 115.9 67 80.6
arahy.Tifrunner.gnm1.ann1.R82D2M Arachis hypogaea HOM05D001470 ORTHO05D006430 1.3e-23 115.5 98 62.2
Potri.005G181300 Populus trichocarpa HOM05D001470 ORTHO05D006430 1.3e-23 115.5 66 83.3
MSTRG.1421 Avicennia marina HOM05D001470 ORTHO05D006430 1.6e-23 115.2 66 81.8
Migut.L00248 Erythranthe guttata HOM05D001470 ORTHO05D006430 1.6e-23 115.2 66 80.3
Sabra05G0137300 Salix brachista HOM05D001470 ORTHO05D006430 3.7e-23 114.0 66 80.3
arahy.Tifrunner.gnm1.ann1.EB568G Arachis hypogaea HOM05D001470 ORTHO05D006430 6.3e-23 113.2 97 61.9
arahy.Tifrunner.gnm1.ann1.N36HW8 Arachis hypogaea HOM05D001470 ORTHO05D006430 6.3e-23 113.2 97 61.9
PGR044G0726 Punica granatum HOM05D001470 ORTHO05D006430 8.2e-23 112.8 73 71.2
unitig_52.g17218 Utricularia gibba HOM05D001470 ORTHO05D006430 8.2e-23 112.8 68 76.5
AT1G21690 Arabidopsis thaliana HOM05D001470 ORTHO05D006430 1.1e-22 112.5 66 78.8
COL.COLO4_03955 Corchorus olitorius HOM05D001470 ORTHO05D006430 1.1e-22 112.5 66 78.8
SGA_v2.0_scaffold52G18933 Striga asiatica HOM05D001470 ORTHO05D006430 1.1e-22 112.5 66 80.3
CANSAT56G2008 Cannabis sativa HOM05D001470 ORTHO05D006430 1.4e-22 112.1 66 77.3
Duzib093G1303 Durio zibethinus HOM05D001470 ORTHO05D006430 1.4e-22 112.1 78 70.5
Gohir.A06G046900 Gossypium hirsutum HOM05D001470 ORTHO05D006430 1.4e-22 112.1 83 66.3
Lsat_1_v5_gn_9_71120 Lactuca sativa HOM05D001470 ORTHO05D006430 1.4e-22 112.1 66 78.8
Thecc.08G130500 Theobroma cacao HOM05D001470 ORTHO05D006430 1.4e-22 112.1 66 80.3
TAR381G1563 Trochodendron aralioides HOM05D001470 ORTHO05D006430 1.4e-22 112.1 66 80.3
Manes.02G166700 Manihot esculenta HOM05D001470 ORTHO05D006430 2.4e-22 111.3 66 78.8
Atru.chr13.1538 Acer truncatum HOM05D001470 ORTHO05D006430 3.1e-22 110.9 66 75.8
Hma1.2p1_0542F.1_g175030 Hydrangea macrophylla HOM05D001470 ORTHO05D006430 3.1e-22 110.9 66 78.8
Ciclev10001485m.g Citrus clementina HOM05D001470 ORTHO05D006430 4.1e-22 110.5 66 75.8
Cc10_g12440 Coffea canephora HOM05D001470 ORTHO05D006430 4.1e-22 110.5 66 77.3
Dinv27272 Davidia involucrata HOM05D001470 ORTHO05D006430 4.1e-22 110.5 66 78.8
MBI06_g33105_MAGBIO Magnolia biondii HOM05D001470 ORTHO05D006430 4.1e-22 110.5 66 78.8
TWI60G0500 Tripterygium wilfordii HOM05D001470 ORTHO05D006430 4.1e-22 110.5 66 77.3
Gohir.D06G047200 Gossypium hirsutum HOM05D001470 ORTHO05D006430 5.3e-22 110.2 66 77.3
Gorai.010G052800 Gossypium raimondii HOM05D001470 ORTHO05D006430 5.3e-22 110.2 66 77.3
AL1G34850 Arabidopsis lyrata HOM05D001470 ORTHO05D006430 6.9e-22 109.8 66 77.3
CSS0002859 Camellia sinensis var. sinensis HOM05D001470 ORTHO05D006430 6.9e-22 109.8 66 77.3
CSS0035008 Camellia sinensis var. sinensis HOM05D001470 ORTHO05D006430 6.9e-22 109.8 66 77.3
Os12g0176500 Oryza sativa ssp. japonica HOM05D001470 ORTHO05D006430 6.9e-22 109.8 66 75.8
Potri.002G080100 Populus trichocarpa HOM05D001470 ORTHO05D006430 6.9e-22 109.8 66 78.8
SalBow7G0673 Salvia bowleyana HOM05D001470 ORTHO05D006430 6.9e-22 109.8 97 59.8
CARHR022040 Cardamine hirsuta HOM05D001470 ORTHO05D006430 9.0e-22 109.4 66 77.3
Thhalv10008129m.g Eutrema salsugineum HOM05D001470 ORTHO05D006430 9.0e-22 109.4 96 61.5
Potri.002G080066 Populus trichocarpa HOM05D000308 ORTHO05D000194 9.0e-22 109.4 66 78.8
Rhsim06G0130900 Rhododendron simsii HOM05D001470 ORTHO05D006430 9.0e-22 109.4 74 67.6
HanXRQChr11g0326191 Helianthus annuus HOM05D001470 ORTHO05D006430 1.2e-21 109.0 66 77.3
QL09p033191 Quercus lobata HOM05D001470 ORTHO05D006430 1.2e-21 109.0 85 64.7
HPP92_021531 Vanilla planifolia HOM05D010164 ORTHO05D006430 1.2e-21 109.0 68 72.1
GSVIVG01008825001 Vitis vinifera HOM05D001470 ORTHO05D006430 1.2e-21 109.0 66 78.8
CDE07G1761 Ceratophyllum demersum HOM05D001470 ORTHO05D006430 1.5e-21 108.6 66 74.2
ECA232G1439 Erigeron canadensis HOM05D001470 ORTHO05D006430 1.5e-21 108.6 67 76.1
Eucgr.F04332 Eucalyptus grandis HOM05D001470 ORTHO05D006430 1.5e-21 108.6 66 75.8
Lj1g0021925 Lotus japonicus HOM05D001470 ORTHO05D006430 1.5e-21 108.6 66 75.8
Nn1g08900 Nelumbo nucifera HOM05D001470 ORTHO05D006430 1.5e-21 108.6 66 75.8
vmacro12378 Vaccinium macrocarpon HOM05D001470 ORTHO05D006430 1.5e-21 108.6 66 77.3
TPR.G13461 Trifolium pratense HOM05D001470 ORTHO05D006430 2.0e-21 108.2 66 75.8
Zm00001eb408240 Zea mays HOM05D001470 ORTHO05D006430 2.0e-21 108.2 66 74.2
BcaB07g32165 Brassica carinata HOM05D001470 ORTHO05D006430 2.6e-21 107.8 66 75.8
BcaC05g26087 Brassica carinata HOM05D001470 ORTHO05D006430 2.6e-21 107.8 66 75.8
A06p17770 Brassica napus HOM05D001470 ORTHO05D006430 2.6e-21 107.8 66 75.8
C05p20660 Brassica napus HOM05D001470 ORTHO05D006430 2.6e-21 107.8 66 75.8
BolC5t30765H Brassica oleracea HOM05D001470 ORTHO05D006430 2.6e-21 107.8 66 75.8
BraA06t24869Z Brassica rapa HOM05D001470 ORTHO05D006430 2.6e-21 107.8 66 75.8
BraA08t34817Z Brassica rapa HOM05D001470 ORTHO05D006430 2.6e-21 107.8 66 75.8
Sc02g0005030 Simmondsia chinensis HOM05D001470 ORTHO05D006430 2.6e-21 107.8 67 73.1
Glyma.06G116000 Glycine max HOM05D001470 ORTHO05D006430 3.4e-21 107.5 66 77.3
Lalb_Chr08g0241231 Lupinus albus HOM05D001470 ORTHO05D006430 3.4e-21 107.5 66 75.8
Nitab4.5_0000111g0110 Nicotiana tabacum HOM05D001470 ORTHO05D006430 3.4e-21 107.5 66 75.8
Nitab4.5_0006720g0030 Nicotiana tabacum HOM05D001470 ORTHO05D006430 3.4e-21 107.5 66 75.8
Phvul.009G128066 Phaseolus vulgaris HOM05D001470 ORTHO05D006430 3.4e-21 107.5 66 78.8
Phvul.009G128132 Phaseolus vulgaris HOM05D001470 ORTHO05D006430 3.4e-21 107.5 66 78.8
Sp1g19230 Schrenkiella parvula HOM05D001470 ORTHO05D006430 3.4e-21 107.5 66 75.8
A08p28860 Brassica napus HOM05D001470 ORTHO05D006430 4.5e-21 107.1 66 74.2
C08p21000 Brassica napus HOM05D001470 ORTHO05D006430 4.5e-21 107.1 66 74.2
CAN.G1486.1 Capsicum annuum HOM05D001470 ORTHO05D006430 4.5e-21 107.1 66 75.8
MELO3C010507.2 Cucumis melo HOM05D001470 ORTHO05D006430 4.5e-21 107.1 109 57.8
Peaxi162Scf00310g00416 Petunia axillaris HOM05D001470 ORTHO05D006430 4.5e-21 107.1 97 58.8
Actinidia15224 Actinidia chinensis HOM05D001470 ORTHO05D006430 7.6e-21 106.3 66 75.8
Ah.01g003720 Amaranthus hybridus HOM05D001470 ORTHO05D006430 7.6e-21 106.3 67 71.6
Aqoxy5G02375 Aquilegia oxysepala HOM05D001470 ORTHO05D006430 7.6e-21 106.3 66 74.2
CiPaw.16G025200 Carya illinoinensis HOM05D001470 ORTHO05D006430 7.6e-21 106.3 66 75.8
ClCG11G015940 Citrullus lanatus HOM05D001470 ORTHO05D006430 7.6e-21 106.3 66 75.8
Psat5g085800 Pisum sativum HOM05D001470 ORTHO05D006430 7.6e-21 106.3 66 74.2
Sed0019306 Sechium edule HOM05D001470 ORTHO05D006430 7.6e-21 106.3 66 75.8
Solyc11g012820.2 Solanum lycopersicum HOM05D001470 ORTHO05D006430 7.6e-21 106.3 66 75.8
Sopen11g007560 Solanum pennellii HOM05D001470 ORTHO05D006430 7.6e-21 106.3 66 75.8
PSO541G1645 Papaver somniferum HOM05D001470 ORTHO05D006430 1.0e-20 105.9 66 74.2
PSO675G8498 Papaver somniferum HOM05D001470 ORTHO05D006430 1.0e-20 105.9 66 74.2
PGSC0003DMG400006047 Solanum tuberosum HOM05D001470 ORTHO05D006430 1.0e-20 105.9 66 74.2
VMungo1309G0926 Vigna mungo HOM05D001470 ORTHO05D006430 1.0e-20 105.9 66 75.8
BcaC07g39111 Brassica carinata HOM05D001470 ORTHO05D006430 1.3e-20 105.5 66 72.7
CiPaw.16G025300 Carya illinoinensis HOM05D001470 ORTHO05D006430 1.3e-20 105.5 66 75.8
CsaV3_4G028050 Cucumis sativus L. HOM05D001470 ORTHO05D006430 1.3e-20 105.5 66 75.8
Medtr3g088380 Medicago truncatula HOM05D001470 ORTHO05D006430 1.3e-20 105.5 97 56.7
Carub.0001s2112 Capsella rubella HOM05D001470 ORTHO05D006430 1.7e-20 105.1 66 74.2
AUR62008715 Chenopodium quinoa HOM05D001470 ORTHO05D006430 1.7e-20 105.1 67 71.6
AUR62025519 Chenopodium quinoa HOM05D001470 ORTHO05D006430 1.7e-20 105.1 67 71.6
AUR62043484 Chenopodium quinoa HOM05D001470 ORTHO05D006430 1.7e-20 105.1 67 71.6
Ca_16595_v3 Cicer arietinum L. HOM05D001470 ORTHO05D006430 1.7e-20 105.1 66 74.2
Haze_17520 Corylus avellana HOM05D001470 ORTHO05D006430 2.9e-20 104.4 73 68.5
Glyma.04G246800 Glycine max HOM05D001470 ORTHO05D006430 2.9e-20 104.4 66 75.8
CAN.G208.18 Capsicum annuum HOM05D001470 ORTHO05D006430 3.8e-20 104.0 66 74.2
MD15G1344500 Malus domestica HOM05D001470 ORTHO05D006430 5.0e-20 103.6 66 72.7
Prupe.1G492200 Prunus persica HOM05D001470 ORTHO05D006430 5.0e-20 103.6 66 72.7
HPP92_021488 Vanilla planifolia HOM05D001470 ORTHO05D006430 5.0e-20 103.6 67 70.1
SHI03814 Sapria himalayana HOM05D000002 ORTHO05D000001 8.5e-20 102.8 98 61.2
THA.LOC104800216 Tarenaya hassleriana HOM05D001470 ORTHO05D006430 8.5e-20 102.8 66 71.2
Aa31LG7G5660 Aethionema arabicum HOM05D001470 ORTHO05D006430 1.4e-19 102.1 66 71.2
ATR1001G012 Amborella trichopoda HOM05D001470 ORTHO05D006430 1.4e-19 102.1 66 72.7
Pp3c3_37360 Physcomitrium patens HOM05D001470 ORTHO05D006430 1.4e-19 102.1 97 56.7
FvH4_2g27570 Fragaria vesca HOM05D001470 ORTHO05D006430 1.9e-19 101.7 66 71.2
FAN15G1662 Fragaria x ananassa HOM05D001470 ORTHO05D006430 1.9e-19 101.7 66 71.2
FAN20G2509 Fragaria x ananassa HOM05D001470 ORTHO05D006430 1.9e-19 101.7 66 71.2
FAN24G2905 Fragaria x ananassa HOM05D001470 ORTHO05D006430 1.9e-19 101.7 66 71.2
FAN27G2248 Fragaria x ananassa HOM05D001470 ORTHO05D006430 1.9e-19 101.7 66 71.2
AagrBONN_evm.TU.Sc2ySwM_344.1249 Anthoceros agrestis HOM05D001470 ORTHO05D006430 3.2e-19 100.9 67 68.7
MBI06_g45440_MAGBIO Magnolia biondii HOM05D001470 ORTHO05D006430 3.2e-19 100.9 80 65.0
Cfa018559 Carpinus fangiana HOM05D001470 ORTHO05D006430 4.2e-19 100.5 66 72.7
RcHm_v2.0_Chr6g0296411 Rosa chinensis HOM05D001470 ORTHO05D006430 5.5e-19 100.1 66 69.7
BolC8t49737H Brassica oleracea HOM05D001470 ORTHO05D006430 2.1e-18 98.2 66 71.2
SEGI_33622 Sequoiadendron giganteum HOM05D001470 ORTHO05D006430 2.7e-18 97.8 67 70.1
Hund26791 Selenicereus undatus HOM05D001470 ORTHO05D006430 3.6e-18 97.4 58 79.3
SMO308G0051 Selaginella moellendorffii HOM05D001470 ORTHO05D006430 1.0e-17 95.9 67 64.2
Mapoly0014s0096 Marchantia polymorpha HOM05D001470 ORTHO05D006430 1.3e-17 95.5 67 65.7
SHI08441 Sapria himalayana HOM05D012376 ORTHO05D003290 1.8e-17 95.1 90 60.0
CsaV3_UNG115920 Cucumis sativus L. HOM05D001470 ORTHO05D006430 2.3e-17 94.7 57 78.9
CBR_g49986 Chara braunii HOM05D001470 ORTHO05D006430 2.5e-16 91.3 71 62.0
HanXRQChr01g0013731 Helianthus annuus HOM05D001470 ORTHO05D006430 2.5e-16 91.3 61 68.9
SHI14628 Sapria himalayana HOM05D000105 ORTHO05D000023 1.3e-15 89.0 82 62.2
SHI22361 Sapria himalayana HOM05D005583 ORTHO05D006507 1.7e-15 88.6 75 62.7
SHI31853 Sapria himalayana HOM05D004888 ORTHO05D005792 2.2e-15 88.2 94 56.4
SHI18084 Sapria himalayana HOM05D002902 ORTHO05D008934 2.8e-15 87.8 95 56.8
SHI04115 Sapria himalayana HOM05D000512 ORTHO05D000861 1.4e-14 85.5 91 58.2
Cre06.g251800 Chlamydomonas reinhardtii HOM05D001470 ORTHO05D006430 4.1e-14 84.0 75 57.3
SHI03833 Sapria himalayana HOM05D000002 ORTHO05D000001 9.1e-14 82.8 78 61.5
SHI20242 Sapria himalayana HOM05D000002 ORTHO05D000001 1.5e-13 82.0 60 70.0
SHI22474 Sapria himalayana HOM05D004374 ORTHO05D005430 2.6e-13 81.3 71 62.0
SHI06012 Sapria himalayana HOM05D001959 ORTHO05D001955 4.5e-13 80.5 107 49.5
Migut.O00855 Erythranthe guttata HOM05D001470 ORTHO05D006430 5.9e-13 80.1 49 75.5
SHI18811 Sapria himalayana HOM05D001398 ORTHO05D006507 5.9e-13 80.1 63 68.3
SHI28122 Sapria himalayana HOM05D012376 ORTHO05D006507 1.3e-12 79.0 70 60.0
SHI03645 Sapria himalayana HOM05D012376 ORTHO05D006507 2.2e-12 78.2 106 44.3
SHI29807 Sapria himalayana HOM05D012376 ORTHO05D000014 2.2e-12 78.2 78 56.4
SHI06474 Sapria himalayana HOM05D001167 ORTHO05D001054 2.9e-12 77.8 66 60.6
SHI26606 Sapria himalayana HOM05D002759 ORTHO05D003290 1.4e-11 75.5 57 70.2
SHI37023 Sapria himalayana HOM05D000846 ORTHO05D006755 1.9e-11 75.1 64 59.4
DCAR_018873 Daucus carota HOM05D001470 ORTHO05D006430 3.2e-11 74.3 52 63.5
MCO10G401 Micromonas commoda HOM05D001470 ORTHO05D006430 5.5e-11 73.6 66 51.5
SHI30098 Sapria himalayana HOM05D004564 ORTHO05D006106 9.4e-11 72.8 84 57.1
SHI11774 Sapria himalayana HOM05D012376 ORTHO05D006507 1.6e-10 72.0 77 53.2
Haze_27379 Corylus avellana HOM05D001470 ORTHO05D006430 3.6e-10 70.9 67 50.7
SHI22008 Sapria himalayana HOM05D005591 ORTHO05D007131 3.6e-10 70.9 102 43.1
EL10Ac2g03027 Beta vulgaris HOM05D001470 ORTHO05D006430 6.1e-10 70.1 43 72.1
SHI02882 Sapria himalayana HOM05D000942 ORTHO05D000918 1.4e-09 68.9 104 44.2
SHI33201 Sapria himalayana HOM05D000175 ORTHO05D004574 3.0e-09 67.8 82 51.2
MD00G1201700 Malus domestica HOM05D001470 ORTHO05D006430 6.7e-09 66.6 48 64.6
SHI04515 Sapria himalayana HOM05D012376 ORTHO05D002750 6.7e-09 66.6 100 43.0
Thecc.08G130000 Theobroma cacao HOM05D001470 ORTHO05D006430 6.7e-09 66.6 45 68.9
SHI06747 Sapria himalayana HOM05D012376 ORTHO05D006507 1.1e-08 65.9 66 50.0
SHI26413 Sapria himalayana HOM05D000002 ORTHO05D000001 1.1e-08 65.9 70 48.6
PRCOL_00005755 Prasinoderma coloniale HOM05D001470 ORTHO05D006430 2.6e-08 64.7 116 31.0
SHI15276 Sapria himalayana HOM05D000023 ORTHO05D000014 2.6e-08 64.7 89 49.4
SHI50060 Sapria himalayana HOM05D000002 ORTHO05D000001 2.2e-07 61.6 96 41.7
Cfa022789 Carpinus fangiana HOM05D001470 ORTHO05D006430 3.7e-07 60.8 66 43.9
SHI04053 Sapria himalayana HOM05D005117 ORTHO05D005956 4.8e-07 60.5 40 75.0
SHI27055 Sapria himalayana HOM05D004750 ORTHO05D006207 8.2e-07 59.7 80 51.2
SHI27837 Sapria himalayana HOM05D002585 ORTHO05D002917 8.2e-07 59.7 69 58.0
SHI22307 Sapria himalayana HOM05D003655 ORTHO05D004065 1.1e-06 59.3 47 68.1
PRCOL_00000131 Prasinoderma coloniale HOM05D001470 ORTHO05D006756 1.4e-06 58.9 99 31.3
SHI16653 Sapria himalayana HOM05D012376 ORTHO05D009727 1.8e-06 58.5 65 52.3
SHI02700 Sapria himalayana HOM05D003301 ORTHO05D003665 3.1e-06 57.8 61 59.0
SHI16674 Sapria himalayana HOM05D004640 ORTHO05D005489 3.1e-06 57.8 61 50.8
SHI36417 Sapria himalayana HOM05D000023 ORTHO05D000014 3.1e-06 57.8 155 36.1
SHI17143 Sapria himalayana HOM05D004430 ORTHO05D005088 4.1e-06 57.4 122 39.3
SHI05595 Sapria himalayana HOM05D001544 ORTHO05D002732 5.3e-06 57.0 112 40.2
SHI24815 Sapria himalayana HOM05D005129 ORTHO05D005585 6.9e-06 56.6 74 44.6
SHI26381 Sapria himalayana HOM05D012376 ORTHO05D006507 6.9e-06 56.6 32 81.2
SHI30105 Sapria himalayana HOM05D004750 ORTHO05D006207 6.9e-06 56.6 125 34.4


User provided reference genes

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