Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI05410 Sapria himalayana HOM05D001065 ORTHO05D033638 1.6e-77 292.7 149 100.0
FAN15G0383 Fragaria x ananassa HOM05D001065 ORTHO05D002020 5.8e-16 88.2 96 55.2
FAN20G0301 Fragaria x ananassa HOM05D001065 ORTHO05D002020 5.8e-16 88.2 96 55.2
FvH4_2g08620 Fragaria vesca HOM05D001065 ORTHO05D002020 7.6e-16 87.8 96 55.2
GSVIVG01031951001 Vitis vinifera HOM05D001065 ORTHO05D002020 9.9e-16 87.4 104 52.9
RcHm_v2.0_Chr6g0263951 Rosa chinensis HOM05D001065 ORTHO05D002020 1.7e-15 86.7 94 53.2
FAN24G1495 Fragaria x ananassa HOM05D001065 ORTHO05D002020 2.9e-15 85.9 96 55.2
FAN27G2579 Fragaria x ananassa HOM05D001065 ORTHO05D002020 3.8e-15 85.5 96 54.2
Manes.15G164300 Manihot esculenta HOM05D001065 ORTHO05D002020 1.4e-14 83.6 91 53.8
MD10G1077800 Malus domestica HOM05D001065 ORTHO05D002020 1.9e-14 83.2 100 51.0
TAR628G1043 Trochodendron aralioides HOM05D001065 ORTHO05D002020 2.4e-14 82.8 98 52.0
MD05G1067900 Malus domestica HOM05D001065 ORTHO05D002020 3.2e-14 82.4 101 50.5
FAN24G1858 Fragaria x ananassa HOM05D001065 ORTHO05D002020 4.2e-14 82.0 104 50.0
Eucgr.I01261 Eucalyptus grandis HOM05D001065 ORTHO05D002020 5.4e-14 81.6 105 47.6
Prupe.8G098500 Prunus persica HOM05D001065 ORTHO05D002020 5.4e-14 81.6 91 52.7
QL11p043340 Quercus lobata HOM05D001065 ORTHO05D002020 9.3e-14 80.9 109 46.8
Haze_02373 Corylus avellana HOM05D001065 ORTHO05D002020 1.2e-13 80.5 91 50.5
AUR62011336 Chenopodium quinoa HOM05D001065 ORTHO05D002020 1.6e-13 80.1 103 50.5
Gohir.A04G122200 Gossypium hirsutum HOM05D001065 ORTHO05D002020 2.1e-13 79.7 101 49.5
Gohir.D04G164200 Gossypium hirsutum HOM05D001065 ORTHO05D002020 2.1e-13 79.7 101 49.5
Gorai.012G152400 Gossypium raimondii HOM05D001065 ORTHO05D002020 2.1e-13 79.7 101 49.5
Thecc.02G086600 Theobroma cacao HOM05D001065 ORTHO05D002020 3.5e-13 79.0 91 52.7
AUR62016724 Chenopodium quinoa HOM05D001065 ORTHO05D002020 4.6e-13 78.6 103 50.5
Lj9C369G8 Lonicera japonica HOM05D001065 ORTHO05D002020 6.0e-13 78.2 98 46.9
Cfa005013 Carpinus fangiana HOM05D001065 ORTHO05D002020 7.9e-13 77.8 91 49.5
THA.LOC104804355 Tarenaya hassleriana HOM05D001065 ORTHO05D002020 1.0e-12 77.4 103 46.6
EL10Ac9g21737 Beta vulgaris HOM05D001065 ORTHO05D002020 1.3e-12 77.0 98 54.1
Duzib132G0011 Durio zibethinus HOM05D001065 ORTHO05D002020 1.8e-12 76.6 105 46.7
Hund00280 Selenicereus undatus HOM05D001065 ORTHO05D002020 1.8e-12 76.6 95 54.7
C03p85780 Brassica napus HOM05D001065 ORTHO05D002020 2.3e-12 76.3 94 53.2
BolC3t20869H Brassica oleracea HOM05D001065 ORTHO05D002020 2.3e-12 76.3 94 53.2
CARHR242310 Cardamine hirsuta HOM05D001065 ORTHO05D002020 3.0e-12 75.9 89 52.8
Migut.B00247 Erythranthe guttata HOM05D001065 ORTHO05D002020 3.0e-12 75.9 106 45.3
A08p16830 Brassica napus HOM05D001065 ORTHO05D002020 3.9e-12 75.5 94 53.2
BraA08t33648Z Brassica rapa HOM05D001065 ORTHO05D002020 3.9e-12 75.5 94 54.3
Sp7g32230 Schrenkiella parvula HOM05D001065 ORTHO05D002020 5.1e-12 75.1 93 51.6
COL.COLO4_25916 Corchorus olitorius HOM05D001065 ORTHO05D002020 8.7e-12 74.3 105 45.7
Dinv23536 Davidia involucrata HOM05D001065 ORTHO05D002020 1.5e-11 73.6 83 50.6
Oeu014346.1 Olea europaea HOM05D001065 ORTHO05D002020 1.5e-11 73.6 97 48.5
Potri.004G153300 Populus trichocarpa HOM05D001065 ORTHO05D002020 1.5e-11 73.6 90 52.2
Sabra04G0101700 Salix brachista HOM05D001065 ORTHO05D002020 1.9e-11 73.2 99 49.5
AL7G16800 Arabidopsis lyrata HOM05D001065 ORTHO05D002020 2.5e-11 72.8 89 51.7
CiPaw.06G136200 Carya illinoinensis HOM05D001065 ORTHO05D002020 2.5e-11 72.8 106 45.3
PGR142G3772 Punica granatum HOM05D001065 ORTHO05D002020 2.5e-11 72.8 104 47.1
Atru.chr5.2998 Acer truncatum HOM05D001065 ORTHO05D002020 3.3e-11 72.4 91 48.4
Gohir.D02G214800 Gossypium hirsutum HOM05D001065 ORTHO05D002020 3.3e-11 72.4 91 47.3
Gorai.005G242600 Gossypium raimondii HOM05D001065 ORTHO05D002020 3.3e-11 72.4 91 47.3
Aa31LG2G16120 Aethionema arabicum HOM05D001065 ORTHO05D002020 4.3e-11 72.0 103 48.5
Carub.0007s0587 Capsella rubella HOM05D001065 ORTHO05D002020 4.3e-11 72.0 96 49.0
Cc02_g17680 Coffea canephora HOM05D001065 ORTHO05D002020 4.3e-11 72.0 81 51.9
AT4G34430 Arabidopsis thaliana HOM05D001065 ORTHO05D002020 5.6e-11 71.6 89 51.7
DCAR_028991 Daucus carota HOM05D001065 ORTHO05D002020 5.6e-11 71.6 118 43.2
Gohir.A03G193700 Gossypium hirsutum HOM05D001065 ORTHO05D002020 5.6e-11 71.6 91 46.2
QL11p043385 Quercus lobata HOM05D001065 ORTHO05D033638 5.6e-11 71.6 103 43.7
Sc08g0000450 Simmondsia chinensis HOM05D001065 ORTHO05D002020 5.6e-11 71.6 99 46.5
arahy.Tifrunner.gnm1.ann1.3Z4KTG Arachis hypogaea HOM05D001065 ORTHO05D002020 7.4e-11 71.2 101 43.6
arahy.Tifrunner.gnm1.ann1.VE4HHH Arachis hypogaea HOM05D001065 ORTHO05D002020 7.4e-11 71.2 101 43.6
Duzib052G1110 Durio zibethinus HOM05D001065 ORTHO05D002020 7.4e-11 71.2 105 44.8
Medtr4g069830 Medicago truncatula HOM05D001065 ORTHO05D002020 7.4e-11 71.2 81 50.6
Thhalv10024321m.g Eutrema salsugineum HOM05D001065 ORTHO05D002020 9.6e-11 70.9 89 51.7
ECA236G0111 Erigeron canadensis HOM05D001065 ORTHO05D002020 1.3e-10 70.5 81 50.6
Psat7g141080 Pisum sativum HOM05D001065 ORTHO05D002020 1.6e-10 70.1 81 49.4
Sed0027635 Sechium edule HOM05D001065 ORTHO05D002020 1.6e-10 70.1 101 46.5
Ah.01g019480 Amaranthus hybridus HOM05D001065 ORTHO05D002020 2.1e-10 69.7 97 49.5
CSS0030616 Camellia sinensis var. sinensis HOM05D001065 ORTHO05D002020 2.1e-10 69.7 83 49.4
SGA_v2.0_scaffold58G20547 Striga asiatica HOM05D001065 ORTHO05D002020 2.1e-10 69.7 89 44.9
MSTRG.16799 Avicennia marina HOM05D001065 ORTHO05D002020 2.8e-10 69.3 95 45.3
BolC1t00421H Brassica oleracea HOM05D001453 ORTHO05D002020 2.8e-10 69.3 99 47.5
MELO3C012530.2 Cucumis melo HOM05D001065 ORTHO05D002020 2.8e-10 69.3 87 50.6
Actinidia00507 Actinidia chinensis HOM05D001065 ORTHO05D002020 6.2e-10 68.2 100 43.0
ClCG02G005100 Citrullus lanatus HOM05D001065 ORTHO05D002020 8.1e-10 67.8 95 45.3
Phvul.011G046200 Phaseolus vulgaris HOM05D001065 ORTHO05D002020 8.1e-10 67.8 92 44.6
Oeu015979.1 Olea europaea HOM05D001065 ORTHO05D002020 1.1e-09 67.4 107 42.1
C01p04330 Brassica napus HOM05D001453 ORTHO05D002020 1.4e-09 67.0 88 48.9
Ciclev10027804m.g Citrus clementina HOM05D001065 ORTHO05D002020 1.4e-09 67.0 104 45.2
HanXRQChr16g0505791 Helianthus annuus HOM05D001065 ORTHO05D002020 1.4e-09 67.0 83 49.4
Lalb_Chr23g0265411 Lupinus albus HOM05D001065 ORTHO05D002020 1.4e-09 67.0 102 42.2
A01p04010 Brassica napus HOM05D001453 ORTHO05D002020 1.8e-09 66.6 88 48.9
BraA01t00389Z Brassica rapa HOM05D001065 ORTHO05D002020 1.8e-09 66.6 88 48.9
Lj3g0022498 Lotus japonicus HOM05D001065 ORTHO05D002020 1.8e-09 66.6 101 43.6
Aqoxy5G01664 Aquilegia oxysepala HOM05D001065 ORTHO05D002020 2.4e-09 66.2 72 48.6
Dinv42072 Davidia involucrata HOM05D001065 ORTHO05D002020 3.1e-09 65.9 49 59.2
vmacro02117 Vaccinium macrocarpon HOM05D001065 ORTHO05D002020 3.1e-09 65.9 83 45.8
VMungo1127G1908 Vigna mungo HOM05D001065 ORTHO05D002020 3.1e-09 65.9 91 44.0
Lalb_Chr03g0025761 Lupinus albus HOM05D001065 ORTHO05D002020 4.0e-09 65.5 72 50.0
PSO675G2415 Papaver somniferum HOM05D001065 ORTHO05D002020 4.0e-09 65.5 73 52.1
Rhsim11G0175900 Rhododendron simsii HOM05D001065 ORTHO05D002020 5.3e-09 65.1 83 45.8
Ca_20862_v3 Cicer arietinum L. HOM05D001065 ORTHO05D002020 6.9e-09 64.7 101 43.6
Lsat_1_v5_gn_7_89080 Lactuca sativa HOM05D001065 ORTHO05D002020 6.9e-09 64.7 85 43.5
Glyma.12G044200 Glycine max HOM05D001065 ORTHO05D002020 1.5e-08 63.5 95 42.1
PSO541G5612 Papaver somniferum HOM05D001065 ORTHO05D002020 3.4e-08 62.4 69 52.2
SalBow6G5925 Salvia bowleyana HOM05D001065 ORTHO05D002020 4.5e-08 62.0 92 43.5
SalBow6G6018 Salvia bowleyana HOM05D001065 ORTHO05D002020 4.5e-08 62.0 92 43.5
Nitab4.5_0009466g0040 Nicotiana tabacum HOM05D001065 ORTHO05D002020 5.8e-08 61.6 102 44.1
HPP92_009468 Vanilla planifolia HOM05D001065 ORTHO05D002020 7.6e-08 61.2 59 52.5
Lalb_Chr01g0002611 Lupinus albus HOM05D001065 ORTHO05D002020 1.3e-07 60.5 67 47.8
Glyma.11G118900 Glycine max HOM05D001065 ORTHO05D002020 1.7e-07 60.1 94 41.5
Nitab4.5_0001794g0100 Nicotiana tabacum HOM05D001065 ORTHO05D002020 3.8e-07 58.9 101 42.6
CDE04G1217 Ceratophyllum demersum HOM05D001065 ORTHO05D002020 6.4e-07 58.2 89 42.7
CDE06G0945 Ceratophyllum demersum HOM05D001065 ORTHO05D002020 1.1e-06 57.4 92 39.1
Peaxi162Scf00016g00832 Petunia axillaris HOM05D001065 ORTHO05D002020 1.1e-06 57.4 102 41.2
CAN.G322.127 Capsicum annuum HOM05D001065 ORTHO05D002020 1.4e-06 57.0 99 40.4


User provided reference genes

Program Settings