Gene: Carub.0007s0587
General Information
Structural Information
- Species Capsella rubella
- Gene Identifier Carub.0007s0587
- Transcript Identifier Carub.0007s0587.1
- Gene Type Coding gene
- Location scaffold_7 : 2196823-2200813 : negative
Gene Family Information
- ID HOM05D001065
- #Genes/#Species 574/100
- Phylogenetic origin
- ID ORTHO05D002020
- #Genes/#Species 326/100
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- id Carub.0007s0587.v1.1
- pacid 39233252
- synonym Carubv10004067m.g
Descriptions
- Description PTHR12802//PTHR12802:SF39 - SWI/SNF COMPLEX-RELATED // SWI/SNF COMPLEX SUBUNIT SWI3D
- Loading (ortholog descriptions from ath)...
Functional Annotation
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0008270 | IEA | InterPro | zinc ion binding |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR007526 | SWIRM domain |
| IPR036388 | Winged helix-like DNA-binding domain superfamily |
| IPR001005 | SANT/Myb domain |
| IPR009057 | Homeobox-like domain superfamily |
| IPR032451 | SMARCC, C-terminal |
| IPR000433 | Zinc finger, ZZ-type |
| IPR017930 | Myb domain |
| IPR043145 | Zinc finger, ZZ-type superfamily |
| IPR041984 | Rsc8/Ssr1/Ssr2, zinc finger, ZZ-type |
| Mapman id | Description |
|---|---|
| 12.4.1.1.2 | Chromatin organisation.nucleosome remodeling.SWI/SNF chromatin remodeling complexes.core modules.component SWI3 |