Gene: AT4G34430

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G34430
  • Transcript Identifier AT4G34430.2
  • Gene Type Coding gene
  • Location Chr4 : 16461069-16464993 : positive

Gene Family Information

  • ID HOM05D001065
  • #Genes/#Species 574/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G34430.2
  • symbol CHB3
  • uniprot Q8VY05

Descriptions

  • Description DNA-binding family protein
  • Computational description CHB3; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity, zinc ion binding; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), SWIRM (InterPro:IPR007526), SANT, eukarya (InterPro:IPR017884), Zinc finger, ZZ-type (InterPro:IPR000433); BEST Arabidopsis thaliana protein match is: SWITCH/sucrose nonfermenting 3C (TAIR:AT1G21700.1); Has 16492 Blast hits to 11005 proteins in 907 species: Archae - 40; Bacteria - 1715; Metazoa - 6618; Fungi - 2333; Plants - 955; Viruses - 102; Other Eukaryotes - 4729 (source: NCBI BLink).
  • Computational description CHB3; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity, zinc ion binding; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), SWIRM (InterPro:IPR007526), SANT, eukarya (InterPro:IPR017884), Zinc finger, ZZ-type (InterPro:IPR000433); BEST Arabidopsis thaliana protein match is: SWITCH/sucrose nonfermenting 3C (TAIR:AT1G21700.1); Has 16471 Blast hits to 10991 proteins in 902 species: Archae - 40; Bacteria - 1696; Metazoa - 6618; Fungi - 2331; Plants - 955; Viruses - 102; Other Eukaryotes - 4729 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006325
IEA
GOA Databasechromatin organization

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008270
IEA
Gene Ontologyzinc ion binding
GO:0008270
IEA
InterProzinc ion binding
GO:0005515
IPI
Gene Ontologyprotein binding1
GO:0005515
IEA
InterProprotein binding
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0003677
IEA
GOA DatabaseDNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM
Gene Ontologynucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036388 Winged helix-like DNA-binding domain superfamily
IPR000433 Zinc finger, ZZ-type
IPR041984 Rsc8/Ssr1/Ssr2, zinc finger, ZZ-type
IPR017930 Myb domain
IPR001005 SANT/Myb domain
IPR009057 Homeobox-like domain superfamily
IPR007526 SWIRM domain
IPR043145 Zinc finger, ZZ-type superfamily
IPR032451 SMARCC, C-terminal
Mapman id Description
12.4.1.1.2 Chromatin organisation.nucleosome remodeling.SWI/SNF chromatin remodeling complexes.core modules.component SWI3