Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI04083 Sapria himalayana HOM05D005087 ORTHO05D006427 2.7e-141 505.4 263 100.0
TAR623G1255 Trochodendron aralioides HOM05D005087 ORTHO05D006427 6.8e-60 235.0 224 57.6
CsaV3_7G030750 Cucumis sativus L. HOM05D005087 ORTHO05D006427 2.0e-59 233.4 224 57.1
Atru.chr11.2578 Acer truncatum HOM05D005087 ORTHO05D006427 9.8e-59 231.1 266 50.8
MELO3C023581.2 Cucumis melo HOM05D005087 ORTHO05D006427 1.7e-58 230.3 224 56.7
Potri.001G262600 Populus trichocarpa HOM05D005087 ORTHO05D006427 3.7e-58 229.2 219 57.1
ClCG09G004390 Citrullus lanatus HOM05D005087 ORTHO05D006427 4.9e-58 228.8 224 56.2
Sed0026614 Sechium edule HOM05D005087 ORTHO05D006427 2.4e-57 226.5 219 56.6
CSS0029256 Camellia sinensis var. sinensis HOM05D005087 ORTHO05D006427 1.6e-56 223.8 219 57.1
Aa31LG11G13680 Aethionema arabicum HOM05D005087 ORTHO05D006427 7.8e-56 221.5 243 52.3
Cpa.g.sc125.40 Carica papaya HOM05D005087 ORTHO05D006427 1.0e-55 221.1 219 55.3
Sabra16G0161000 Salix brachista HOM05D005087 ORTHO05D006427 1.9e-54 216.9 235 52.3
AL6G26800 Arabidopsis lyrata HOM05D005087 ORTHO05D006427 3.6e-53 212.6 219 55.3
Manes.10G136400 Manihot esculenta HOM05D005087 ORTHO05D006427 4.7e-53 212.2 219 54.8
BcaB01g05014 Brassica carinata HOM05D005087 ORTHO05D006427 2.3e-52 209.9 219 53.9
CiPaw.14G002700 Carya illinoinensis HOM05D005087 ORTHO05D006427 4.0e-52 209.1 224 54.9
Prupe.2G022000 Prunus persica HOM05D005087 ORTHO05D006427 4.0e-52 209.1 219 53.9
Thhalv10012535m.g Eutrema salsugineum HOM05D005087 ORTHO05D006427 5.2e-52 208.8 219 53.4
Carub.0006s1411 Capsella rubella HOM05D005087 ORTHO05D006427 1.5e-51 207.2 219 52.5
CARHR197390 Cardamine hirsuta HOM05D005087 ORTHO05D006427 2.6e-51 206.5 219 52.1
Actinidia21541 Actinidia chinensis HOM05D005087 ORTHO05D006427 4.4e-51 205.7 219 52.5
QL04p009808 Quercus lobata HOM05D005087 ORTHO05D006427 4.4e-51 205.7 224 53.6
THA.LOC104819098 Tarenaya hassleriana HOM05D005087 ORTHO05D006427 5.8e-51 205.3 219 49.8
Thecc.05G218700 Theobroma cacao HOM05D005087 ORTHO05D006427 9.8e-51 204.5 224 52.2
AT5G15920 Arabidopsis thaliana HOM05D005087 ORTHO05D006427 1.3e-50 204.1 219 53.4
GSVIVG01032195001 Vitis vinifera HOM05D005087 ORTHO05D006427 1.3e-50 204.1 224 51.8
Rhsim01G0127000 Rhododendron simsii HOM05D005087 ORTHO05D006427 1.7e-50 203.8 219 51.6
Aqoxy1G00327 Aquilegia oxysepala HOM05D005087 ORTHO05D006427 2.2e-50 203.4 223 52.5
Nn7g36293 Nelumbo nucifera HOM05D005087 ORTHO05D006427 2.9e-50 203.0 224 51.3
BraA03t10076Z Brassica rapa HOM05D005087 ORTHO05D006427 4.9e-50 202.2 219 52.5
CDE09G1121 Ceratophyllum demersum HOM05D005087 ORTHO05D006427 4.9e-50 202.2 217 52.5
MD07G1021900 Malus domestica HOM05D005087 ORTHO05D006427 4.9e-50 202.2 219 53.4
A03p07470 Brassica napus HOM05D005087 ORTHO05D006427 1.1e-49 201.1 219 52.1
TWI09G0473 Tripterygium wilfordii HOM05D005087 ORTHO05D006427 1.4e-49 200.7 255 46.3
MBI11_g23277_MAGBIO Magnolia biondii HOM05D005087 ORTHO05D006427 2.0e-48 196.8 250 48.4
Hma1.2p1_0685F.1_g203140 Hydrangea macrophylla HOM05D005087 ORTHO05D006427 4.6e-48 195.7 219 52.1
Lj9C640G8 Lonicera japonica HOM05D005087 ORTHO05D006427 1.3e-47 194.1 219 48.9
Haze_03133 Corylus avellana HOM05D005087 ORTHO05D006427 3.0e-47 193.0 224 50.9
Haze_03136 Corylus avellana HOM05D005087 ORTHO05D006427 3.0e-47 193.0 224 50.9
ATR0626G229 Amborella trichopoda HOM05D005087 ORTHO05D006427 8.6e-47 191.4 219 49.3
Solyc01g087720.4 Solanum lycopersicum HOM05D005087 ORTHO05D006427 2.5e-46 189.9 219 50.7
Sopen01g034670 Solanum pennellii HOM05D005087 ORTHO05D006427 2.5e-46 189.9 219 50.7
Duzib177G0717 Durio zibethinus HOM05D005087 ORTHO05D006427 7.3e-46 188.3 257 45.9
FvH4_7g01640 Fragaria vesca HOM05D005087 ORTHO05D006427 1.4e-44 184.1 219 47.5
FAN06G3789 Fragaria x ananassa HOM05D005087 ORTHO05D006427 1.4e-44 184.1 219 47.5
Gorai.013G183900 Gossypium raimondii HOM05D005087 ORTHO05D006427 4.0e-44 182.6 222 48.6
Gohir.D13G161900 Gossypium hirsutum HOM05D005087 ORTHO05D006427 6.8e-44 181.8 222 48.6
DCAR_029700 Daucus carota HOM05D005087 ORTHO05D006427 1.5e-43 180.6 224 46.9
CAN.G219.75 Capsicum annuum HOM05D005087 ORTHO05D006427 2.6e-43 179.9 219 47.9
Eucgr.G03334 Eucalyptus grandis HOM05D005087 ORTHO05D006427 4.4e-43 179.1 222 47.7
Gohir.A13G157100 Gossypium hirsutum HOM05D005087 ORTHO05D006427 7.5e-43 178.3 222 48.2
Nitab4.5_0000707g0070 Nicotiana tabacum HOM05D005087 ORTHO05D006427 8.3e-42 174.9 219 46.6
MSTRG.17010 Avicennia marina HOM05D005087 ORTHO05D006427 1.1e-41 174.5 219 45.2
ECA248G2604 Erigeron canadensis HOM05D005087 ORTHO05D006427 1.1e-41 174.5 219 44.3
SalBow5G0870 Salvia bowleyana HOM05D005087 ORTHO05D006427 1.4e-41 174.1 219 45.2
SalBow5G2001 Salvia bowleyana HOM05D005087 ORTHO05D006427 1.4e-41 174.1 219 45.2
RcHm_v2.0_Chr1g0317911 Rosa chinensis HOM05D005087 ORTHO05D006427 1.9e-41 173.7 233 46.4
SGA_v2.0_scaffold119G32758 Striga asiatica HOM05D005087 ORTHO05D006427 1.2e-40 171.0 219 44.3
SGA_v2.0_scaffold42G16189 Striga asiatica HOM05D005087 ORTHO05D006427 1.6e-40 170.6 219 43.8
PGR031G1517 Punica granatum HOM05D005087 ORTHO05D006427 4.6e-40 169.1 222 45.0
HanXRQChr01g0007751 Helianthus annuus HOM05D005087 ORTHO05D006427 3.0e-39 166.4 219 42.9
EL10Ac2g04365 Beta vulgaris HOM05D005087 ORTHO05D006427 5.1e-39 165.6 218 43.6
Cfa022636 Carpinus fangiana HOM05D005087 ORTHO05D006427 6.6e-39 165.2 200 49.5
Migut.B01270 Erythranthe guttata HOM05D005087 ORTHO05D006427 6.6e-39 165.2 219 42.0
Nitab4.5_0002388g0080 Nicotiana tabacum HOM05D005087 ORTHO05D006427 1.5e-38 164.1 230 43.0
C03p08670 Brassica napus HOM05D005087 ORTHO05D006427 4.3e-38 162.5 219 44.7
BolC3t13367H Brassica oleracea HOM05D005087 ORTHO05D006427 4.3e-38 162.5 219 44.7
Lju99A9T21 Lonicera japonica HOM05D005087 ORTHO05D006427 7.3e-38 161.8 219 43.8
Lsat_1_v5_gn_1_103161 Lactuca sativa HOM05D005087 ORTHO05D006427 1.1e-36 157.9 219 41.6
Ciclev10030582m.g Citrus clementina HOM05D005087 ORTHO05D006427 1.4e-36 157.5 219 44.7
Sc10g0000340 Simmondsia chinensis HOM05D005087 ORTHO05D006427 2.4e-36 156.8 220 41.4
PSO210G7144 Papaver somniferum HOM05D005087 ORTHO05D006427 1.2e-35 154.5 217 42.4
arahy.Tifrunner.gnm1.ann1.1A5L99 Arachis hypogaea HOM05D005087 ORTHO05D006427 2.0e-35 153.7 219 42.5
arahy.Tifrunner.gnm1.ann1.JJ1LEU Arachis hypogaea HOM05D005087 ORTHO05D006427 2.6e-35 153.3 219 42.9
Dinv09311 Davidia involucrata HOM05D005087 ORTHO05D006427 7.6e-35 151.8 219 45.2
Peaxi162Scf00694g00319 Petunia axillaris HOM05D005087 ORTHO05D006427 9.9e-35 151.4 219 43.8
Cc02_g28540 Coffea canephora HOM05D005087 ORTHO05D006427 3.8e-34 149.4 219 39.3
Oeu049480.1 Olea europaea HOM05D005087 ORTHO05D006427 4.9e-34 149.1 309 34.6
VMungo0251G2588 Vigna mungo HOM05D005087 ORTHO05D006427 1.4e-33 147.5 218 42.7
SEGI_29436 Sequoiadendron giganteum HOM05D005087 ORTHO05D006427 1.9e-33 147.1 219 40.6
Phvul.002G285500 Phaseolus vulgaris HOM05D005087 ORTHO05D006427 3.2e-33 146.4 219 42.0
Hund09863 Selenicereus undatus HOM05D005087 ORTHO05D006427 7.1e-33 145.2 219 40.6
Psat6g018320 Pisum sativum HOM05D005087 ORTHO05D006427 1.2e-32 144.4 219 42.5
Glyma.20G198300 Glycine max HOM05D005087 ORTHO05D006427 7.8e-32 141.7 220 41.4
AUR62023092 Chenopodium quinoa HOM05D005087 ORTHO05D006427 2.3e-31 140.2 217 38.7
unitig_22.g5432 Utricularia gibba HOM05D005087 ORTHO05D006427 3.0e-31 139.8 191 40.3
Medtr4g115050 Medicago truncatula HOM05D005087 ORTHO05D006427 3.9e-31 139.4 219 41.1
Lalb_Chr04g0263871 Lupinus albus HOM05D005087 ORTHO05D006427 8.7e-31 138.3 219 39.7
CANSAT80G0443 Cannabis sativa HOM05D005087 ORTHO05D006427 1.1e-30 137.9 255 36.9
Lj3g0013327 Lotus japonicus HOM05D005087 ORTHO05D006427 1.5e-30 137.5 219 40.2
Lj3g0015731 Lotus japonicus HOM05D005087 ORTHO05D006427 1.5e-30 137.5 219 39.7
FAN03G0563 Fragaria x ananassa HOM05D005087 ORTHO05D006427 3.3e-30 136.3 219 39.3
HPP92_016894 Vanilla planifolia HOM05D005087 ORTHO05D006427 5.6e-30 135.6 243 37.4
AUR62009415 Chenopodium quinoa HOM05D005087 ORTHO05D006427 1.4e-28 131.0 217 36.9
Os05g0596600 Oryza sativa ssp. japonica HOM05D005087 ORTHO05D006427 1.8e-28 130.6 217 36.9
Mapoly0007s0066 Marchantia polymorpha HOM05D005087 ORTHO05D006427 9.0e-28 128.3 219 37.9
SMO143G0265 Selaginella moellendorffii HOM05D005087 ORTHO05D006427 3.4e-27 126.3 219 36.1
FAN10G1149 Fragaria x ananassa HOM05D005087 ORTHO05D006427 4.4e-27 125.9 223 39.5
PSO339G3397 Papaver somniferum HOM05D005087 ORTHO05D006427 5.8e-27 125.6 219 38.4
Ca_14518_v3 Cicer arietinum L. HOM05D005087 ORTHO05D006427 2.2e-26 123.6 219 37.4
Hma1.2p1_0685F.1_g203130 Hydrangea macrophylla HOM05D005087 ORTHO05D006427 4.9e-26 122.5 129 51.9
Pp3c24_4940 Physcomitrium patens HOM05D005087 ORTHO05D006427 9.3e-25 118.2 218 36.2
TPR.G14572 Trifolium pratense HOM05D005087 ORTHO05D006427 3.5e-24 116.3 227 36.6
Medtr3g033470 Medicago truncatula HOM05D005087 ORTHO05D006427 3.0e-23 113.2 219 36.1
vmacro21195 Vaccinium macrocarpon HOM05D005087 ORTHO05D006427 3.9e-23 112.8 378 28.6
Sp6g28190 Schrenkiella parvula HOM05D005087 ORTHO05D006427 1.1e-20 104.8 219 32.9
AagrBONN_evm.TU.Sc2ySwM_344.2054 Anthoceros agrestis HOM05D005087 ORTHO05D006427 3.2e-17 93.2 217 28.6
Zm00001eb225540 Zea mays HOM05D005087 ORTHO05D006427 9.3e-17 91.7 128 40.6
Medtr5g036370 Medicago truncatula HOM05D005087 ORTHO05D006427 2.1e-16 90.5 219 32.4
CBR_g88572 Chara braunii HOM05D005087 ORTHO05D000002 1.4e-12 77.8 212 25.9
Actinidia13978 Actinidia chinensis HOM05D005087 ORTHO05D006427 9.6e-06 55.1 106 37.7


User provided reference genes

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