Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI03135 Sapria himalayana HOM05D005445 ORTHO05D007043 5.1e-133 477.6 222 100.0
RcHm_v2.0_Chr4g0397601 Rosa chinensis HOM05D005445 ORTHO05D007043 6.4e-19 98.6 52 86.5
arahy.Tifrunner.gnm1.ann1.K4ERET Arachis hypogaea HOM05D005445 ORTHO05D007043 1.1e-18 97.8 79 64.6
arahy.Tifrunner.gnm1.ann1.HNJF4G Arachis hypogaea HOM05D005445 ORTHO05D007043 1.9e-18 97.1 52 86.5
Dinv12613 Davidia involucrata HOM05D005445 ORTHO05D007043 1.9e-18 97.1 52 84.6
CiPaw.16G104300 Carya illinoinensis HOM05D005445 ORTHO05D007043 3.2e-18 96.3 52 82.7
FvH4_4g06040 Fragaria vesca HOM05D005445 ORTHO05D007043 3.2e-18 96.3 52 86.5
FAN07G1413 Fragaria x ananassa HOM05D005445 ORTHO05D007043 3.2e-18 96.3 52 86.5
FAN17G2613 Fragaria x ananassa HOM05D005445 ORTHO05D007043 3.2e-18 96.3 52 86.5
Prupe.1G063800 Prunus persica HOM05D005445 ORTHO05D007043 3.2e-18 96.3 52 84.6
Atru.chr7.1013 Acer truncatum HOM05D005445 ORTHO05D007043 4.2e-18 95.9 52 86.5
CiPaw.15G161100 Carya illinoinensis HOM05D005445 ORTHO05D007043 5.4e-18 95.5 52 78.8
Glyma.05G220700 Glycine max HOM05D005445 ORTHO05D007043 5.4e-18 95.5 52 84.6
Ca_17431_v3 Cicer arietinum L. HOM05D005445 ORTHO05D007043 7.1e-18 95.1 52 80.8
Ca_17440_v3 Cicer arietinum L. HOM05D005445 ORTHO05D007043 7.1e-18 95.1 52 80.8
Phvul.002G302400 Phaseolus vulgaris HOM05D005445 ORTHO05D007043 7.1e-18 95.1 52 82.7
QL11p008649 Quercus lobata HOM05D005445 ORTHO05D007043 7.1e-18 95.1 52 82.7
Haze_19097 Corylus avellana HOM05D005445 ORTHO05D007043 9.3e-18 94.7 53 81.1
MELO3C003927.2 Cucumis melo HOM05D005445 ORTHO05D007043 9.3e-18 94.7 52 82.7
Nn8g41135 Nelumbo nucifera HOM05D005445 ORTHO05D007043 9.3e-18 94.7 52 82.7
Lalb_Chr05g0223801 Lupinus albus HOM05D005445 ORTHO05D007043 1.2e-17 94.4 53 83.0
VMungo0251G0086 Vigna mungo HOM05D005445 ORTHO05D007043 1.2e-17 94.4 52 80.8
CsaV3_2G009110 Cucumis sativus L. HOM05D005445 ORTHO05D007043 1.6e-17 94.0 52 80.8
HPP92_028347 Vanilla planifolia HOM05D005445 ORTHO05D007043 1.6e-17 94.0 73 63.0
Glyma.08G027200 Glycine max HOM05D005445 ORTHO05D007043 2.7e-17 93.2 51 82.4
Gohir.A08G017100 Gossypium hirsutum HOM05D005445 ORTHO05D007043 3.5e-17 92.8 52 78.8
Lj4g0004845 Lotus japonicus HOM05D005445 ORTHO05D007043 3.5e-17 92.8 52 82.7
Sed0003073 Sechium edule HOM05D005445 ORTHO05D007043 3.5e-17 92.8 51 82.4
Aqoxy7G02630 Aquilegia oxysepala HOM05D005445 ORTHO05D007043 6.0e-17 92.0 52 76.9
ClCG11G011350 Citrullus lanatus HOM05D005445 ORTHO05D007043 7.8e-17 91.7 52 80.8
Thhalv10016855m.g Eutrema salsugineum HOM05D005445 ORTHO05D007043 7.8e-17 91.7 67 64.2
Cpa.g.sc115.19 Carica papaya HOM05D005445 ORTHO05D007043 1.0e-16 91.3 52 80.8
Duzib170G0675 Durio zibethinus HOM05D005445 ORTHO05D007043 1.0e-16 91.3 52 80.8
Gohir.D08G027500 Gossypium hirsutum HOM05D005445 ORTHO05D007043 1.0e-16 91.3 52 76.9
Gorai.004G024500 Gossypium raimondii HOM05D005445 ORTHO05D007043 1.0e-16 91.3 52 76.9
MD16G1238000 Malus domestica HOM05D005445 ORTHO05D007043 1.0e-16 91.3 52 78.8
GSVIVG01032266001 Vitis vinifera HOM05D005445 ORTHO05D007043 1.3e-16 90.9 52 80.8
Duzib168G0912 Durio zibethinus HOM05D005445 ORTHO05D007043 1.7e-16 90.5 51 80.4
Psat7g020920 Pisum sativum HOM05D005445 ORTHO05D007043 1.7e-16 90.5 52 78.8
Ciclev10008923m.g Citrus clementina HOM05D005445 ORTHO05D007043 2.3e-16 90.1 52 78.8
MBI13_g31572_MAGBIO Magnolia biondii HOM05D005445 ORTHO05D007043 2.3e-16 90.1 53 75.5
THA.LOC104815270 Tarenaya hassleriana HOM05D005445 ORTHO05D007043 2.3e-16 90.1 52 78.8
Cfa020755 Carpinus fangiana HOM05D005445 ORTHO05D007043 3.0e-16 89.7 49 85.7
Thecc.09G196900 Theobroma cacao HOM05D005445 ORTHO05D007043 3.0e-16 89.7 52 75.0
Actinidia07565 Actinidia chinensis HOM05D005445 ORTHO05D007043 3.9e-16 89.4 52 78.8
Aa31LG5G9140 Aethionema arabicum HOM05D005445 ORTHO05D007043 3.9e-16 89.4 52 78.8
COL.COLO4_23410 Corchorus olitorius HOM05D005445 ORTHO05D007043 3.9e-16 89.4 52 76.9
Lj5C772G2 Lonicera japonica HOM05D005445 ORTHO05D007043 3.9e-16 89.4 52 76.9
TPR.G25470 Trifolium pratense HOM05D005445 ORTHO05D007043 3.9e-16 89.4 52 76.9
TWI63G1185 Tripterygium wilfordii HOM05D005445 ORTHO05D007043 3.9e-16 89.4 52 78.8
TAR383G0382 Trochodendron aralioides HOM05D005445 ORTHO05D007043 3.9e-16 89.4 52 78.8
TAR383G1024 Trochodendron aralioides HOM05D005445 ORTHO05D007043 3.9e-16 89.4 52 78.8
AL4G19530 Arabidopsis lyrata HOM05D005445 ORTHO05D007043 5.1e-16 89.0 52 78.8
AT2G26590 Arabidopsis thaliana HOM05D005445 ORTHO05D007043 5.1e-16 89.0 52 78.8
CSS0000968 Camellia sinensis var. sinensis HOM05D005445 ORTHO05D007043 5.1e-16 89.0 52 76.9
PGR142G0598 Punica granatum HOM05D005445 ORTHO05D007043 5.1e-16 89.0 49 83.7
Medtr8g101230 Medicago truncatula HOM05D005445 ORTHO05D007043 8.7e-16 88.2 52 78.8
Potri.006G078800 Populus trichocarpa HOM05D005445 ORTHO05D007043 8.7e-16 88.2 52 75.0
Hund03231 Selenicereus undatus HOM05D005445 ORTHO05D007043 8.7e-16 88.2 52 75.0
ECA234G2663 Erigeron canadensis HOM05D005445 ORTHO05D007043 1.1e-15 87.8 52 73.1
Thhalv10000977m.g Eutrema salsugineum HOM05D005445 ORTHO05D007043 1.1e-15 87.8 51 76.5
Zm00001eb297230 Zea mays HOM05D005445 ORTHO05D007043 1.1e-15 87.8 52 75.0
Lalb_Chr09g0332001 Lupinus albus HOM05D005445 ORTHO05D007043 1.5e-15 87.4 52 76.9
CDE06G0990 Ceratophyllum demersum HOM05D005445 ORTHO05D007043 1.9e-15 87.0 52 73.1
Sp4g09300 Schrenkiella parvula HOM05D005445 ORTHO05D007043 1.9e-15 87.0 52 76.9
BcaB01g03027 Brassica carinata HOM05D005445 ORTHO05D007043 2.5e-15 86.7 52 76.9
Hma1.2p1_0314F.1_g122070 Hydrangea macrophylla HOM05D005445 ORTHO05D007043 2.5e-15 86.7 50 76.0
Sabra06G0059700 Salix brachista HOM05D005445 ORTHO05D007043 2.5e-15 86.7 53 71.7
ATR0626G233 Amborella trichopoda HOM05D005445 ORTHO05D007043 3.3e-15 86.3 83 50.6
BcaC01g04909 Brassica carinata HOM05D005445 ORTHO05D007043 3.3e-15 86.3 52 76.9
A03p26880 Brassica napus HOM05D005445 ORTHO05D007043 3.3e-15 86.3 52 76.9
C03p32210 Brassica napus HOM05D005445 ORTHO05D007043 3.3e-15 86.3 52 76.9
BolC3t15563H Brassica oleracea HOM05D005445 ORTHO05D007043 3.3e-15 86.3 52 76.9
BraA03t11899Z Brassica rapa HOM05D005445 ORTHO05D007043 3.3e-15 86.3 52 76.9
CARHR118490 Cardamine hirsuta HOM05D005445 ORTHO05D007043 3.3e-15 86.3 52 75.0
Solyc07g017400.3 Solanum lycopersicum HOM05D005445 ORTHO05D007043 5.6e-15 85.5 52 69.2
Sopen07g006100 Solanum pennellii HOM05D005445 ORTHO05D007043 5.6e-15 85.5 52 69.2
Carub.0004s0844 Capsella rubella HOM05D005445 ORTHO05D007043 7.3e-15 85.1 52 75.0
Peaxi162Scf01184g00140 Petunia axillaris HOM05D005445 ORTHO05D007043 7.3e-15 85.1 51 74.5
Nitab4.5_0000899g0030 Nicotiana tabacum HOM05D005445 ORTHO05D007043 1.3e-14 84.3 52 67.3
Rhsim04G0099700 Rhododendron simsii HOM05D005445 ORTHO05D007043 1.3e-14 84.3 52 71.2
DCAR_020460 Daucus carota HOM05D005445 ORTHO05D007043 1.6e-14 84.0 52 75.0
Manes.02G221800 Manihot esculenta HOM05D005445 ORTHO05D007043 1.6e-14 84.0 49 75.5
Os05g0594800 Oryza sativa ssp. japonica HOM05D005445 ORTHO05D007043 2.1e-14 83.6 51 72.5
Nitab4.5_0004036g0030 Nicotiana tabacum HOM05D005445 ORTHO05D007043 2.8e-14 83.2 49 71.4
CANSAT80G1260 Cannabis sativa HOM05D005445 ORTHO05D007043 3.6e-14 82.8 52 71.2
SEGI_14233 Sequoiadendron giganteum HOM05D005445 ORTHO05D007043 3.6e-14 82.8 50 76.0
MSTRG.26517 Avicennia marina HOM05D005445 ORTHO05D007043 4.8e-14 82.4 52 67.3
CAN.G146.2 Capsicum annuum HOM05D005445 ORTHO05D007043 8.1e-14 81.6 52 69.2
Eucgr.C00062 Eucalyptus grandis HOM05D005445 ORTHO05D007043 1.1e-13 81.3 49 77.6
SalBow5G4362 Salvia bowleyana HOM05D005445 ORTHO05D007043 1.1e-13 81.3 51 68.6
PSO063G4940 Papaver somniferum HOM05D005445 ORTHO05D007043 2.4e-13 80.1 51 68.6
PSO170G6081 Papaver somniferum HOM05D005445 ORTHO05D007043 2.4e-13 80.1 51 68.6
Lsat_1_v5_gn_5_80620 Lactuca sativa HOM05D005445 ORTHO05D007043 3.1e-13 79.7 52 67.3
Cc00_g00070 Coffea canephora HOM05D005445 ORTHO05D007043 9.0e-13 78.2 52 65.4
SGA_v2.0_scaffold485G52365 Striga asiatica HOM05D005445 ORTHO05D007043 2.0e-12 77.0 52 63.5
Oeu028820.1 Olea europaea HOM05D005445 ORTHO05D007043 2.1e-09 67.0 41 73.2
Migut.L01918 Erythranthe guttata HOM05D005445 ORTHO05D007043 7.9e-09 65.1 41 68.3
Pp3c21_370 Physcomitrium patens HOM05D005445 ORTHO05D007043 7.9e-09 65.1 52 55.8
CBR_g28055 Chara braunii HOM05D005445 ORTHO05D007043 2.3e-08 63.5 50 58.0
HanXRQChr10g0309531 Helianthus annuus HOM05D005445 ORTHO05D007043 5.1e-08 62.4 41 68.3
Ah.10g032730 Amaranthus hybridus HOM05D005445 ORTHO05D007043 8.7e-08 61.6 34 82.4
AUR62027984 Chenopodium quinoa HOM05D005445 ORTHO05D007043 1.1e-07 61.2 56 62.5
Potri.003G027722 Populus trichocarpa HOM05D005445 ORTHO05D007043 4.3e-07 59.3 53 54.7
EL10Ac2g03624 Beta vulgaris HOM05D005445 ORTHO05D007043 5.6e-07 58.9 34 76.5
AUR62020729 Chenopodium quinoa HOM05D005445 ORTHO05D007043 9.6e-07 58.2 35 74.3
HPP92_015797 Vanilla planifolia HOM05D005445 ORTHO05D007043 2.8e-06 56.6 53 52.8
SMO116G0379 Selaginella moellendorffii HOM05D005445 ORTHO05D007043 3.6e-06 56.2 54 51.9
unitig_85.g27245 Utricularia gibba HOM05D005445 ORTHO05D007043 3.6e-06 56.2 38 55.3


User provided reference genes

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