Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI01964 Sapria himalayana HOM05D001987 ORTHO05D006514 2.6e-64 248.4 117 100.0
MBI05_g05348_MAGBIO Magnolia biondii HOM05D001987 ORTHO05D006514 6.6e-31 137.5 137 57.7
Solyc00g500100.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 1.9e-30 136.0 147 53.7
Solyc00g500117.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 1.9e-30 136.0 147 53.7
Solyc00g500274.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 1.9e-30 136.0 147 53.7
SHI20096 Sapria himalayana HOM05D001987 ORTHO05D006514 5.6e-30 134.4 119 58.8
CsaV3_UNG208600 Cucumis sativus L. HOM05D001987 ORTHO05D006514 1.2e-29 133.3 147 52.4
Solyc00g500309.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 2.8e-29 132.1 147 53.1
TAR358G0001 Trochodendron aralioides HOM05D001987 ORTHO05D006514 3.6e-29 131.7 147 53.1
Solyc12g038985.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 6.1e-29 131.0 153 50.3
LjContig00315g0000313 Lotus japonicus HOM05D001987 ORTHO05D006514 1.0e-28 130.2 147 51.0
Cfa023008 Carpinus fangiana HOM05D001987 ORTHO05D006514 1.4e-28 129.8 129 56.6
Lsat_1_v5_gn_0_38040 Lactuca sativa HOM05D001987 ORTHO05D006514 4.0e-28 128.3 147 51.0
Sc17g0003730 Simmondsia chinensis HOM05D001987 ORTHO05D006514 4.0e-28 128.3 158 48.7
Dinv06676 Davidia involucrata HOM05D001987 ORTHO05D006514 6.8e-28 127.5 129 56.6
Lsat_1_v5_gn_8_132861 Lactuca sativa HOM05D001987 ORTHO05D006514 6.8e-28 127.5 147 50.3
SHI29633 Sapria himalayana HOM05D001987 ORTHO05D006514 8.9e-28 127.1 120 57.5
Solyc00g500245.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 1.5e-27 126.3 129 56.6
Psat7g012480 Pisum sativum HOM05D001987 ORTHO05D006514 8.3e-26 120.6 129 53.5
Peaxi162Scf01098g00013 Petunia axillaris HOM05D001987 ORTHO05D006514 7.0e-25 117.5 108 61.1
CDE02G0251 Ceratophyllum demersum HOM05D001987 ORTHO05D006514 2.0e-24 115.9 129 53.5
SalBow1G3504 Salvia bowleyana HOM05D001987 ORTHO05D006514 4.6e-24 114.8 112 56.2
SalBow1G4210 Salvia bowleyana HOM05D001987 ORTHO05D006514 4.6e-24 114.8 112 56.2
SEGI_40200 Sequoiadendron giganteum HOM05D001987 ORTHO05D006514 3.3e-22 108.6 121 50.4
Ca_30750_v3 Cicer arietinum L. HOM05D001987 ORTHO05D006514 9.5e-22 107.1 112 53.6
Psat1g091000 Pisum sativum HOM05D001987 ORTHO05D006514 2.8e-21 105.5 112 52.7
Solyc05g045920.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 2.8e-21 105.5 129 48.8
Hund30965 Selenicereus undatus HOM05D001987 ORTHO05D006514 3.6e-21 105.1 128 52.3
Hund12658 Selenicereus undatus HOM05D001987 ORTHO05D006514 3.4e-19 98.6 127 50.4
Peaxi162Scf00934g00143 Petunia axillaris HOM05D001987 ORTHO05D006514 3.7e-18 95.1 161 39.1
Peaxi162Scf00360g00815 Petunia axillaris HOM05D001987 ORTHO05D006514 4.9e-18 94.7 101 54.5
ClCG08G015640 Citrullus lanatus HOM05D001987 ORTHO05D006514 8.3e-18 94.0 120 49.2
arahy.Tifrunner.gnm1.ann1.D5EGR1 Arachis hypogaea HOM05D001987 ORTHO05D006514 4.1e-17 91.7 111 48.6
Sopen00g002770 Solanum pennellii HOM05D004291 ORTHO05D005620 2.7e-16 89.0 110 50.0
Eucgr.H02719 Eucalyptus grandis HOM05D001987 ORTHO05D006514 6.0e-16 87.8 64 68.8
HanXRQChr16g0504311 Helianthus annuus HOM05D001987 ORTHO05D006514 7.8e-16 87.4 137 44.5
HanXRQMTg0579601 Helianthus annuus HOM05D001987 ORTHO05D006514 7.8e-16 87.4 137 44.5
Lalb_Chr00c21g0405751 Lupinus albus HOM05D001987 ORTHO05D006514 1.3e-15 86.7 145 40.0
Lalb_Chr00c24g0407071 Lupinus albus HOM05D001987 ORTHO05D006514 1.3e-15 86.7 145 40.0
Hma1.2p1_0105F.1_g050680 Hydrangea macrophylla HOM05D001987 ORTHO05D006514 2.3e-15 85.9 64 67.2
Lalb_Chr11g0070101 Lupinus albus HOM05D001987 ORTHO05D006514 3.0e-15 85.5 146 39.7
HanXRQChr05g0147721 Helianthus annuus HOM05D001987 ORTHO05D006514 3.9e-15 85.1 137 43.8
Lj2P1221T93 Lonicera japonica HOM05D001987 ORTHO05D006514 1.5e-14 83.2 69 62.3
Lj2P1230T111 Lonicera japonica HOM05D001987 ORTHO05D006514 1.5e-14 83.2 69 62.3
arahy.Tifrunner.gnm1.ann1.8UR9GU Arachis hypogaea HOM05D001987 ORTHO05D006514 1.9e-14 82.8 64 65.6
arahy.Tifrunner.gnm1.ann1.K88Y93 Arachis hypogaea HOM05D001987 ORTHO05D006514 1.9e-14 82.8 64 65.6
arahy.Tifrunner.gnm1.ann1.TY26DT Arachis hypogaea HOM05D001987 ORTHO05D006514 1.9e-14 82.8 64 65.6
TPR.G26049 Trifolium pratense HOM05D001987 ORTHO05D006514 1.9e-14 82.8 69 62.3
CANSAT16G0046 Cannabis sativa HOM05D001987 ORTHO05D006514 2.5e-14 82.4 64 67.2
DCAR_032448 Daucus carota HOM05D001987 ORTHO05D006514 4.3e-14 81.6 64 67.2
A04p09400 Brassica napus HOM05D001987 ORTHO05D006514 5.6e-14 81.3 63 66.7
BolSC28t60371H Brassica oleracea HOM05D001987 ORTHO05D006514 5.6e-14 81.3 63 66.7
CARHR282630 Cardamine hirsuta HOM05D001987 ORTHO05D006514 5.6e-14 81.3 63 66.7
CARHR288240 Cardamine hirsuta HOM05D001987 ORTHO05D006514 7.3e-14 80.9 62 67.7
Solyc09g015860.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 9.5e-14 80.5 114 43.9
Gorai.001G161500 Gossypium raimondii HOM05D001987 ORTHO05D006514 1.1e-12 77.0 136 39.0
ATMG00090 Arabidopsis thaliana HOM05D001987 ORTHO05D006514 1.4e-12 76.6 63 63.5
unitig_87.g28029 Utricularia gibba HOM05D001987 ORTHO05D006514 1.4e-12 76.6 110 43.6
PSO541G5803 Papaver somniferum HOM05D001987 ORTHO05D006514 1.8e-12 76.3 64 60.9
PSO675G5335 Papaver somniferum HOM05D001987 ORTHO05D006514 1.8e-12 76.3 64 60.9
Nitab4.5_0000330g0070 Nicotiana tabacum HOM05D001987 ORTHO05D006514 6.8e-12 74.3 57 68.4
Hund28418 Selenicereus undatus HOM05D001987 ORTHO05D006514 6.8e-12 74.3 64 64.1
Hund29734 Selenicereus undatus HOM05D001987 ORTHO05D006514 6.8e-12 74.3 64 64.1
Hund29823 Selenicereus undatus HOM05D001987 ORTHO05D006514 6.8e-12 74.3 64 64.1
Hund30343 Selenicereus undatus HOM05D001987 ORTHO05D006514 6.8e-12 74.3 64 64.1
Hund30419 Selenicereus undatus HOM05D001987 ORTHO05D006514 6.8e-12 74.3 64 64.1
Nitab4.5_0000309g0180 Nicotiana tabacum HOM05D001987 ORTHO05D005620 1.5e-11 73.2 130 40.8
ClCG08G009700 Citrullus lanatus HOM05D001987 ORTHO05D004018 2.0e-11 72.8 54 66.7
Ah.10g028690 Amaranthus hybridus HOM05D001987 ORTHO05D006514 2.6e-11 72.4 64 60.9
Cpa.g.sc1367.1 Carica papaya HOM05D001987 ORTHO05D006514 3.4e-11 72.0 54 68.5
SabraMtG0007200 Salix brachista HOM05D001987 ORTHO05D004018 3.4e-11 72.0 54 64.8
Dinv35896 Davidia involucrata HOM05D001987 ORTHO05D006514 2.2e-10 69.3 54 66.7
RhsimMtG0002600 Rhododendron simsii HOM05D001987 ORTHO05D006514 2.9e-10 68.9 62 58.1
Actinidia34925 Actinidia chinensis HOM05D001987 ORTHO05D006514 3.7e-10 68.6 62 58.1
Nitab4.5_0007876g0050 Nicotiana tabacum HOM05D001987 ORTHO05D006514 4.9e-10 68.2 88 46.6
SGA_v2.0_scaffold339G49282 Striga asiatica HOM05D001987 ORTHO05D006514 1.1e-09 67.0 62 56.5
Aa31csc822G30 Aethionema arabicum HOM05D001987 ORTHO05D006514 7.1e-09 64.3 62 53.2
ATMG00080 Arabidopsis thaliana HOM05D001987 ORTHO05D004018 7.1e-09 64.3 62 53.2
BolSC28t60316H Brassica oleracea HOM05D001987 ORTHO05D004018 7.1e-09 64.3 62 53.2
BraSC48t46331Z Brassica rapa HOM05D001987 ORTHO05D004018 7.1e-09 64.3 62 53.2
Thhalv10001268m.g Eutrema salsugineum HOM05D001987 ORTHO05D004018 7.1e-09 64.3 62 53.2
HanXRQChr01g0013351 Helianthus annuus HOM05D001987 ORTHO05D004018 7.1e-09 64.3 62 54.8
HanXRQChr01g0013341 Helianthus annuus HOM05D001987 ORTHO05D004018 1.2e-08 63.5 62 53.2
Solyc05g045840.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 1.2e-08 63.5 64 57.8
Nitab4.5_0009561g0030 Nicotiana tabacum HOM05D001987 ORTHO05D004018 1.6e-08 63.2 62 54.8
Sopen05g027050 Solanum pennellii HOM05D001987 ORTHO05D004018 2.7e-08 62.4 62 54.8
ATR0661G567 Amborella trichopoda HOM05D001987 ORTHO05D006514 1.0e-07 60.5 64 56.2
SGA_v2.0_scaffold245G44435 Striga asiatica HOM05D001987 ORTHO05D006514 5.1e-07 58.2 36 75.0
Ah.02g118900 Amaranthus hybridus HOM05D001987 ORTHO05D006514 6.6e-07 57.8 57 57.9
Ah.10g027970 Amaranthus hybridus HOM05D001987 ORTHO05D006514 6.6e-07 57.8 57 57.9
Pp3c2_23477 Physcomitrium patens HOM05D001987 ORTHO05D004018 8.6e-07 57.4 54 48.1
PGSC0003DMG400030936 Solanum tuberosum HOM05D001987 ORTHO05D004018 1.5e-06 56.6 62 50.0
Hund27846 Selenicereus undatus HOM05D001987 ORTHO05D004018 3.3e-06 55.5 58 51.7
SGA_v2.0_scaffold255G45472 Striga asiatica HOM05D001987 ORTHO05D006514 3.3e-06 55.5 58 50.0
AL5G20250 Arabidopsis lyrata HOM05D001987 ORTHO05D016577 7.3e-06 54.3 51 54.9


User provided reference genes

Program Settings