Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold9G05070 Striga asiatica HOM05D003931 ORTHO05D004577 2.3e-145 518.8 256 100.0
Migut.H01834 Erythranthe guttata HOM05D003931 ORTHO05D004577 7.0e-70 268.1 249 54.2
Migut.H01835 Erythranthe guttata HOM05D003931 ORTHO05D004577 1.2e-69 267.3 250 53.6
unitig_749.g13966 Utricularia gibba HOM05D003931 ORTHO05D004577 1.7e-63 246.9 237 53.2
PGR083G2742 Punica granatum HOM05D003931 ORTHO05D004577 7.3e-59 231.5 233 49.4
Zm00001eb413170 Zea mays HOM05D003931 ORTHO05D004577 2.1e-58 229.9 239 51.0
QL08p011429 Quercus lobata HOM05D003931 ORTHO05D004577 1.1e-57 227.6 246 46.7
QL08p011634 Quercus lobata HOM05D003931 ORTHO05D004577 1.1e-57 227.6 246 46.7
QL08p011649 Quercus lobata HOM05D003931 ORTHO05D004577 1.1e-57 227.6 246 46.7
Aqoxy1G03269 Aquilegia oxysepala HOM05D003931 ORTHO05D004577 1.8e-57 226.9 242 47.1
Migut.M01779 Erythranthe guttata HOM05D003931 ORTHO05D004577 1.8e-57 226.9 242 47.1
Nn1g03571 Nelumbo nucifera HOM05D003931 ORTHO05D004577 1.8e-57 226.9 246 48.8
unitig_62.g23279 Utricularia gibba HOM05D003931 ORTHO05D004577 2.4e-57 226.5 238 46.2
Dinv40740 Davidia involucrata HOM05D003931 ORTHO05D004577 4.0e-57 225.7 233 48.1
MELO3C025390.2 Cucumis melo HOM05D003931 ORTHO05D004577 6.8e-57 224.9 245 45.3
ClCG10G005490 Citrullus lanatus HOM05D003931 ORTHO05D004577 8.9e-57 224.6 245 45.7
Sopen07g032620 Solanum pennellii HOM05D003931 ORTHO05D004577 8.9e-57 224.6 250 42.8
TAR626G0527 Trochodendron aralioides HOM05D003931 ORTHO05D004577 8.9e-57 224.6 242 46.3
CANSAT64G1454 Cannabis sativa HOM05D003931 ORTHO05D004577 1.2e-56 224.2 244 46.7
Thhalv10027264m.g Eutrema salsugineum HOM05D003931 ORTHO05D004577 1.2e-56 224.2 246 46.3
Lsat_1_v5_gn_5_6120 Lactuca sativa HOM05D003931 ORTHO05D004577 1.5e-56 223.8 242 45.9
PGSC0003DMG400022225 Solanum tuberosum HOM05D003931 ORTHO05D004577 1.5e-56 223.8 247 43.7
EL10Ac4g07844 Beta vulgaris HOM05D003931 ORTHO05D004577 2.0e-56 223.4 232 47.8
Solyc07g064410.1 Solanum lycopersicum HOM05D003931 ORTHO05D004577 2.0e-56 223.4 249 41.8
Eucgr.F00963 Eucalyptus grandis HOM05D003931 ORTHO05D004577 2.6e-56 223.0 244 45.9
Hma1.2p1_1271F.1_g271720 Hydrangea macrophylla HOM05D003931 ORTHO05D004577 2.6e-56 223.0 242 45.0
Oeu042929.1 Olea europaea HOM05D003931 ORTHO05D004577 2.6e-56 223.0 248 43.1
Sc03g0008690 Simmondsia chinensis HOM05D003931 ORTHO05D004577 3.4e-56 222.6 250 46.0
SGA_v2.0_scaffold172G38997 Striga asiatica HOM05D003931 ORTHO05D004577 4.4e-56 222.2 237 47.7
SGA_v2.0_scaffold9G05067 Striga asiatica HOM05D003931 ORTHO05D004577 4.4e-56 222.2 238 49.2
MSTRG.6909 Avicennia marina HOM05D003931 ORTHO05D004577 7.6e-56 221.5 237 46.0
CsaV3_3G005230 Cucumis sativus L. HOM05D003931 ORTHO05D004577 1.3e-55 220.7 245 44.9
arahy.Tifrunner.gnm1.ann1.07EMGU Arachis hypogaea HOM05D003931 ORTHO05D004577 1.7e-55 220.3 242 45.9
Nitab4.5_0001604g0100 Nicotiana tabacum HOM05D003931 ORTHO05D004577 1.7e-55 220.3 236 45.3
Haze_09657 Corylus avellana HOM05D003931 ORTHO05D004577 2.2e-55 219.9 244 44.7
Lsat_1_v5_gn_5_6180 Lactuca sativa HOM05D003931 ORTHO05D004577 2.2e-55 219.9 238 45.8
ATR0752G116 Amborella trichopoda HOM05D003931 ORTHO05D004577 3.8e-55 219.2 242 45.9
TWI38G0918 Tripterygium wilfordii HOM05D003931 ORTHO05D004577 3.8e-55 219.2 245 45.3
Ah.04g165790 Amaranthus hybridus HOM05D003931 ORTHO05D004577 6.4e-55 218.4 245 44.9
A08p20580 Brassica napus HOM05D003931 ORTHO05D004577 6.4e-55 218.4 250 45.2
Carub.0007s1381 Capsella rubella HOM05D003931 ORTHO05D004577 6.4e-55 218.4 245 45.7
AL7G25800 Arabidopsis lyrata HOM05D003931 ORTHO05D004577 8.4e-55 218.0 235 47.2
BraA08t34014Z Brassica rapa HOM05D003931 ORTHO05D004577 8.4e-55 218.0 250 44.8
CiPaw.11G187800 Carya illinoinensis HOM05D003931 ORTHO05D004577 8.4e-55 218.0 245 44.5
AUR62015742 Chenopodium quinoa HOM05D003931 ORTHO05D004577 8.4e-55 218.0 239 45.2
CARHR234700 Cardamine hirsuta HOM05D003931 ORTHO05D004577 1.1e-54 217.6 233 47.6
AUR62020469 Chenopodium quinoa HOM05D003931 ORTHO05D004577 1.1e-54 217.6 239 45.2
Gorai.002G087700 Gossypium raimondii HOM05D003931 ORTHO05D004577 1.1e-54 217.6 236 47.0
Manes.15G073200 Manihot esculenta HOM05D003931 ORTHO05D004577 1.1e-54 217.6 241 44.0
vmacro11735 Vaccinium macrocarpon HOM05D003931 ORTHO05D004577 1.1e-54 217.6 244 47.1
Sed0028072 Sechium edule HOM05D003931 ORTHO05D004577 1.4e-54 217.2 252 44.4
Ciclev10009005m.g Citrus clementina HOM05D003931 ORTHO05D004577 1.9e-54 216.9 236 46.6
FAN11G2983 Fragaria x ananassa HOM05D003931 ORTHO05D004577 1.9e-54 216.9 246 45.5
Cc05_g13590 Coffea canephora HOM05D003931 ORTHO05D004577 2.4e-54 216.5 235 45.5
Gohir.A01G078700 Gossypium hirsutum HOM05D003931 ORTHO05D004577 2.4e-54 216.5 236 47.0
Sabra16G0288300 Salix brachista HOM05D003931 ORTHO05D004577 2.4e-54 216.5 253 44.3
BcaC07g38267 Brassica carinata HOM05D003931 ORTHO05D004577 3.2e-54 216.1 246 46.3
C08p10140 Brassica napus HOM05D003931 ORTHO05D004577 3.2e-54 216.1 246 46.3
BolC8t48692H Brassica oleracea HOM05D003931 ORTHO05D004577 3.2e-54 216.1 246 46.3
Gohir.D01G065800 Gossypium hirsutum HOM05D003931 ORTHO05D004577 3.2e-54 216.1 236 46.6
Ca_14721_v3 Cicer arietinum L. HOM05D003931 ORTHO05D004577 4.2e-54 215.7 249 42.6
Potri.001G424700 Populus trichocarpa HOM05D003931 ORTHO05D004577 4.2e-54 215.7 244 45.1
Atru.chr2.3378 Acer truncatum HOM05D003931 ORTHO05D004577 5.4e-54 215.3 248 44.8
FvH4_3g22400 Fragaria vesca HOM05D003931 ORTHO05D004577 7.1e-54 214.9 246 45.1
Medtr3g051220 Medicago truncatula HOM05D003931 ORTHO05D004577 7.1e-54 214.9 249 43.0
HanXRQChr05g0159031 Helianthus annuus HOM05D003931 ORTHO05D004577 9.2e-54 214.5 255 42.4
Lj1C870G17 Lonicera japonica HOM05D003931 ORTHO05D004577 9.2e-54 214.5 239 43.5
Prupe.4G210600 Prunus persica HOM05D003931 ORTHO05D004577 9.2e-54 214.5 245 44.5
FAN16G2486 Fragaria x ananassa HOM05D003931 ORTHO05D004577 1.2e-53 214.2 242 45.5
Lalb_Chr06g0171911 Lupinus albus HOM05D003931 ORTHO05D004577 1.2e-53 214.2 233 44.2
CAN.G337.115 Capsicum annuum HOM05D003931 ORTHO05D004577 1.6e-53 213.8 235 43.8
QL08p011463 Quercus lobata HOM05D003931 ORTHO05D004577 1.6e-53 213.8 243 44.4
TPR.G16574 Trifolium pratense HOM05D003931 ORTHO05D004577 1.6e-53 213.8 250 42.0
BcaB03g12524 Brassica carinata HOM05D003931 ORTHO05D004577 2.1e-53 213.4 243 45.3
Cfa020372 Carpinus fangiana HOM05D003931 ORTHO05D004577 2.1e-53 213.4 231 45.9
FAN21G1679 Fragaria x ananassa HOM05D003931 ORTHO05D004577 2.7e-53 213.0 241 44.4
FAN21G3611 Fragaria x ananassa HOM05D003931 ORTHO05D004577 2.7e-53 213.0 241 44.4
PSO675G5012 Papaver somniferum HOM05D003931 ORTHO05D004577 2.7e-53 213.0 240 45.8
Thecc.07G042800 Theobroma cacao HOM05D003931 ORTHO05D004577 2.7e-53 213.0 241 44.0
vmacro11734 Vaccinium macrocarpon HOM05D003931 ORTHO05D004577 2.7e-53 213.0 241 44.0
Duzib213G0550 Durio zibethinus HOM05D003931 ORTHO05D004577 3.5e-53 212.6 236 41.9
AT4G27030 Arabidopsis thaliana HOM05D003931 ORTHO05D004577 4.6e-53 212.2 234 47.0
RcHm_v2.0_Chr5g0039071 Rosa chinensis HOM05D003931 ORTHO05D004577 4.6e-53 212.2 237 46.4
Sp7g25010 Schrenkiella parvula HOM05D003931 ORTHO05D004577 4.6e-53 212.2 245 44.9
DCAR_008677 Daucus carota HOM05D003931 ORTHO05D004577 6.0e-53 211.8 235 44.3
Phvul.006G040800 Phaseolus vulgaris HOM05D003931 ORTHO05D004577 6.0e-53 211.8 247 42.5
Aa31LG5G10380 Aethionema arabicum HOM05D003931 ORTHO05D004577 1.7e-52 210.3 245 43.7
Lj6g0018599 Lotus japonicus HOM05D003931 ORTHO05D004577 1.7e-52 210.3 237 46.0
Sabra11G0123500 Salix brachista HOM05D003931 ORTHO05D004577 1.7e-52 210.3 242 44.2
C01p23150 Brassica napus HOM05D003931 ORTHO05D004577 2.3e-52 209.9 245 44.5
Lalb_Chr02g0155621 Lupinus albus HOM05D003931 ORTHO05D004577 2.3e-52 209.9 243 43.2
VMungo0540G1582 Vigna mungo HOM05D003931 ORTHO05D004577 2.3e-52 209.9 227 44.5
Thhalv10025879m.g Eutrema salsugineum HOM05D003931 ORTHO05D004577 3.0e-52 209.5 246 44.3
MD03G1205300 Malus domestica HOM05D003931 ORTHO05D004577 3.0e-52 209.5 236 44.9
CDE05G0277 Ceratophyllum demersum HOM05D003931 ORTHO05D007395 3.9e-52 209.1 242 44.2
BraA01t01774Z Brassica rapa HOM05D003931 ORTHO05D004577 5.1e-52 208.8 245 44.5
Oeu062594.1 Olea europaea HOM05D003931 ORTHO05D004577 5.1e-52 208.8 222 46.4
Haze_23062 Corylus avellana HOM05D003931 ORTHO05D004577 6.6e-52 208.4 233 42.9
Lj6g0018199 Lotus japonicus HOM05D003931 ORTHO05D004577 6.6e-52 208.4 238 42.9
Os08g0187900 Oryza sativa ssp. japonica HOM05D003931 ORTHO05D004577 6.6e-52 208.4 232 46.6
A01p18190 Brassica napus HOM05D003931 ORTHO05D004577 8.7e-52 208.0 245 44.1
Sc03g0008680 Simmondsia chinensis HOM05D003931 ORTHO05D004577 8.7e-52 208.0 233 47.2
THA.LOC104809192 Tarenaya hassleriana HOM05D003931 ORTHO05D004577 8.7e-52 208.0 245 43.7
PSO541G1838 Papaver somniferum HOM05D003931 ORTHO05D004577 1.1e-51 207.6 240 45.0
Aa31LG5G10360 Aethionema arabicum HOM05D003931 ORTHO05D004577 1.5e-51 207.2 247 44.5
BolC1t02250H Brassica oleracea HOM05D003931 ORTHO05D004577 1.5e-51 207.2 245 44.5
Zm00001eb413200 Zea mays HOM05D003931 ORTHO05D004577 1.5e-51 207.2 239 47.3
Glyma.18G099500 Glycine max HOM05D003931 ORTHO05D004577 1.9e-51 206.8 236 43.2
MD11G1221200 Malus domestica HOM05D003931 ORTHO05D004577 1.9e-51 206.8 250 43.6
Glyma.08G314700 Glycine max HOM05D003931 ORTHO05D004577 3.3e-51 206.1 239 43.1
Psat5g180680 Pisum sativum HOM05D003931 ORTHO05D004577 3.3e-51 206.1 249 41.8
Actinidia09908 Actinidia chinensis HOM05D003931 ORTHO05D004577 4.3e-51 205.7 221 47.1
Sp7g24990 Schrenkiella parvula HOM05D003931 ORTHO05D004577 4.3e-51 205.7 244 42.6
Peaxi162Scf00450g00075 Petunia axillaris HOM05D003931 ORTHO05D004577 5.6e-51 205.3 225 46.2
AUR62015741 Chenopodium quinoa HOM05D003931 ORTHO05D004577 7.3e-51 204.9 229 45.0
Carub.0002s0286 Capsella rubella HOM05D003931 ORTHO05D004577 1.6e-50 203.8 248 41.1
PGSC0003DMG400004435 Solanum tuberosum HOM05D003931 ORTHO05D004577 1.6e-50 203.8 235 43.0
Thhalv10026787m.g Eutrema salsugineum HOM05D003931 ORTHO05D004577 2.1e-50 203.4 248 43.1
Cfa009708 Carpinus fangiana HOM05D003931 ORTHO05D004577 4.7e-50 202.2 231 42.4
Rhsim06G0216100 Rhododendron simsii HOM05D003931 ORTHO05D004577 4.7e-50 202.2 184 52.7
AT1G62190 Arabidopsis thaliana HOM05D003931 ORTHO05D004577 1.1e-49 201.1 247 41.3
CARHR049940 Cardamine hirsuta HOM05D003931 ORTHO05D004577 1.8e-49 200.3 246 42.7
Sc03g0008670 Simmondsia chinensis HOM05D003931 ORTHO05D004577 1.8e-49 200.3 232 44.0
Sp7g25000 Schrenkiella parvula HOM05D003931 ORTHO05D004577 3.4e-48 196.1 251 43.0
Atru.chr2.3340 Acer truncatum HOM05D003931 ORTHO05D004577 4.4e-48 195.7 246 42.7
C07p55050 Brassica napus HOM05D003931 ORTHO05D004577 4.4e-48 195.7 245 41.2
Atru.chr2.3337 Acer truncatum HOM05D003931 ORTHO05D004577 9.9e-48 194.5 237 41.8
Lsat_1_v5_gn_5_5140 Lactuca sativa HOM05D003931 ORTHO05D004577 1.3e-47 194.1 224 42.4
BcaC06g32716 Brassica carinata HOM05D003931 ORTHO05D004577 2.9e-47 193.0 243 39.9
Carub.0004s0202 Capsella rubella HOM05D003931 ORTHO05D004577 3.8e-47 192.6 233 42.5
AagrBONN_evm.TU.Sc2ySwM_368.1941 Anthoceros agrestis HOM05D003931 ORTHO05D004577 6.4e-47 191.8 231 43.3
Migut.H01836 Erythranthe guttata HOM05D003931 ORTHO05D004577 1.4e-46 190.7 234 43.6
Nitab4.5_0004336g0020 Nicotiana tabacum HOM05D003931 ORTHO05D004577 2.4e-46 189.9 205 47.3
BraA03t14771Z Brassica rapa HOM05D003931 ORTHO05D004577 4.2e-46 189.1 244 40.6
AT2G22890 Arabidopsis thaliana HOM05D003931 ORTHO05D004577 5.4e-46 188.7 233 42.1
A03p57020 Brassica napus HOM05D003931 ORTHO05D004577 1.2e-45 187.6 244 40.6
BolC7t46007H Brassica oleracea HOM05D003931 ORTHO05D004577 1.6e-45 187.2 245 39.2
CANSAT11G0562 Cannabis sativa HOM05D003931 ORTHO05D004577 2.1e-45 186.8 233 40.8
BcaB03g12523 Brassica carinata HOM05D003931 ORTHO05D004577 3.5e-45 186.0 235 43.0
CANSAT11G1176 Cannabis sativa HOM05D003931 ORTHO05D004577 7.8e-45 184.9 220 42.7
AL4G12480 Arabidopsis lyrata HOM05D003931 ORTHO05D004577 1.3e-44 184.1 232 41.4
Mapoly0034s0071 Marchantia polymorpha HOM05D003931 ORTHO05D004577 6.6e-44 181.8 227 42.3
SEGI_34207 Sequoiadendron giganteum HOM05D003931 ORTHO05D004577 2.5e-43 179.9 230 39.6
BcaC07g38264 Brassica carinata HOM05D003931 ORTHO05D004577 8.1e-42 174.9 236 42.4
BraA08t34015Z Brassica rapa HOM05D003931 ORTHO05D004577 8.1e-42 174.9 235 41.3
CSS0050113 Camellia sinensis var. sinensis HOM05D003931 ORTHO05D004577 8.1e-42 174.9 184 46.7
SMO364G0503 Selaginella moellendorffii HOM05D003931 ORTHO05D004577 1.4e-41 174.1 227 41.0
BcaC07g38266 Brassica carinata HOM05D003931 ORTHO05D004577 2.4e-41 173.3 236 41.9
C08p10100 Brassica napus HOM05D003931 ORTHO05D004577 2.4e-41 173.3 236 41.9
BolC8t48689H Brassica oleracea HOM05D003931 ORTHO05D004577 2.4e-41 173.3 236 41.9
A08p20590 Brassica napus HOM05D003931 ORTHO05D004577 5.3e-41 172.2 241 40.2
Pp3c13_12570 Physcomitrium patens HOM05D003931 ORTHO05D004577 3.4e-40 169.5 227 39.2
Prupe.4G210500 Prunus persica HOM05D003931 ORTHO05D004577 1.3e-39 167.5 217 41.0
COL.COLO4_09644 Corchorus olitorius HOM05D003931 ORTHO05D004577 3.2e-38 162.9 242 37.6
Aqoxy1G03270 Aquilegia oxysepala HOM05D003931 ORTHO05D004577 7.1e-38 161.8 219 39.7
MCO05G373 Micromonas commoda HOM05D003931 ORTHO05D004577 7.1e-38 161.8 187 43.3
FAN11G0561 Fragaria x ananassa HOM05D003931 ORTHO05D004577 4.6e-37 159.1 224 40.6
Cre16.g673001 Chlamydomonas reinhardtii HOM05D003931 ORTHO05D004577 1.3e-36 157.5 230 39.6
BolC8t48691H Brassica oleracea HOM05D003931 ORTHO05D004577 2.5e-35 153.3 179 44.7
QL09p032903 Quercus lobata HOM05D003931 ORTHO05D004577 2.4e-33 146.7 148 49.3
Cpa.g.sc97.27 Carica papaya HOM05D003931 ORTHO05D004577 9.3e-30 134.8 182 39.6
CBR_g30523 Chara braunii HOM05D003931 ORTHO05D004577 9.3e-30 134.8 324 29.3
Cfa009711 Carpinus fangiana HOM05D003931 ORTHO05D004577 2.1e-29 133.7 181 42.5
ECA246G1165 Erigeron canadensis HOM05D003931 ORTHO05D004577 2.7e-29 133.3 144 42.4
PRCOL_00003954 Prasinoderma coloniale HOM05D003931 ORTHO05D004577 7.9e-29 131.7 219 37.4
FvH4_3g22391 Fragaria vesca HOM05D003931 ORTHO05D004577 6.7e-28 128.6 193 34.2
COL.COLO4_07219 Corchorus olitorius HOM05D003931 ORTHO05D004577 1.1e-27 127.9 127 48.8
Eucgr.L01106 Eucalyptus grandis HOM05D003931 ORTHO05D004577 1.2e-24 117.9 211 34.6
CDE05G0281 Ceratophyllum demersum HOM05D003931 ORTHO05D004577 1.0e-23 114.8 175 39.4
AL3G48190 Arabidopsis lyrata HOM05D003931 ORTHO05D004577 4.2e-22 109.4 97 46.4
Haze_23061 Corylus avellana HOM05D003931 ORTHO05D004577 2.7e-21 106.7 140 41.4
COL.COLO4_07218 Corchorus olitorius HOM05D003931 ORTHO05D004577 2.3e-20 103.6 108 47.2
C08p10120 Brassica napus HOM05D003931 ORTHO05D004577 1.4e-17 94.4 91 47.3
unitig_26.g9960 Utricularia gibba HOM05D003931 ORTHO05D004577 2.9e-15 86.7 90 46.7
C01p23190 Brassica napus HOM05D003931 ORTHO05D004577 2.0e-08 63.9 94 40.4
BcaC06g32715 Brassica carinata HOM05D003931 ORTHO05D004577 2.9e-07 60.1 49 49.0


User provided reference genes

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