Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold9G05067 Striga asiatica HOM05D003931 ORTHO05D004577 0.0e+00 1160.2 561 100.0
ClCG10G005490 Citrullus lanatus HOM05D003931 ORTHO05D004577 1.5e-69 268.1 248 53.2
Oeu042929.1 Olea europaea HOM05D003931 ORTHO05D004577 1.5e-69 268.1 245 53.9
Nitab4.5_0001604g0100 Nicotiana tabacum HOM05D003931 ORTHO05D004577 2.0e-69 267.7 257 51.4
MELO3C025390.2 Cucumis melo HOM05D003931 ORTHO05D004577 4.5e-69 266.5 248 53.2
Nn1g03571 Nelumbo nucifera HOM05D003931 ORTHO05D004577 1.7e-68 264.6 234 54.7
Sed0028072 Sechium edule HOM05D003931 ORTHO05D004577 1.7e-68 264.6 248 52.4
CsaV3_3G005230 Cucumis sativus L. HOM05D003931 ORTHO05D004577 2.9e-68 263.8 248 52.0
MSTRG.6909 Avicennia marina HOM05D003931 ORTHO05D004577 3.8e-68 263.5 238 52.5
Aqoxy1G03269 Aquilegia oxysepala HOM05D003931 ORTHO05D004577 6.5e-68 262.7 248 51.6
PGR083G2742 Punica granatum HOM05D003931 ORTHO05D004577 6.5e-68 262.7 237 52.3
Oeu062594.1 Olea europaea HOM05D003931 ORTHO05D004577 1.1e-67 261.9 239 53.1
Migut.M01779 Erythranthe guttata HOM05D003931 ORTHO05D004577 1.9e-67 261.2 246 52.0
CAN.G337.115 Capsicum annuum HOM05D003931 ORTHO05D004577 2.5e-67 260.8 260 47.7
SGA_v2.0_scaffold172G38997 Striga asiatica HOM05D003931 ORTHO05D004577 2.5e-67 260.8 237 52.7
Dinv40740 Davidia involucrata HOM05D003931 ORTHO05D004577 4.2e-67 260.0 237 52.7
Manes.15G073200 Manihot esculenta HOM05D003931 ORTHO05D004577 4.2e-67 260.0 237 52.3
unitig_62.g23279 Utricularia gibba HOM05D003931 ORTHO05D004577 7.2e-67 259.2 237 52.3
arahy.Tifrunner.gnm1.ann1.07EMGU Arachis hypogaea HOM05D003931 ORTHO05D004577 9.4e-67 258.8 237 50.6
QL08p011429 Quercus lobata HOM05D003931 ORTHO05D004577 1.2e-66 258.5 238 51.7
QL08p011634 Quercus lobata HOM05D003931 ORTHO05D004577 1.2e-66 258.5 238 51.7
QL08p011649 Quercus lobata HOM05D003931 ORTHO05D004577 1.2e-66 258.5 238 51.7
CANSAT64G1454 Cannabis sativa HOM05D003931 ORTHO05D004577 2.7e-66 257.3 241 51.5
Atru.chr2.3378 Acer truncatum HOM05D003931 ORTHO05D004577 6.1e-66 256.1 238 52.1
Potri.001G424700 Populus trichocarpa HOM05D003931 ORTHO05D004577 6.1e-66 256.1 237 51.1
Lj1C870G17 Lonicera japonica HOM05D003931 ORTHO05D004577 7.9e-66 255.8 235 52.8
Solyc07g064410.1 Solanum lycopersicum HOM05D003931 ORTHO05D004577 7.9e-66 255.8 258 48.1
Sopen07g032620 Solanum pennellii HOM05D003931 ORTHO05D004577 7.9e-66 255.8 258 47.7
Ah.04g165790 Amaranthus hybridus HOM05D003931 ORTHO05D004577 2.3e-65 254.2 237 50.6
EL10Ac4g07844 Beta vulgaris HOM05D003931 ORTHO05D004577 3.0e-65 253.8 239 49.8
Lsat_1_v5_gn_5_6120 Lactuca sativa HOM05D003931 ORTHO05D004577 3.0e-65 253.8 239 51.0
Haze_09657 Corylus avellana HOM05D003931 ORTHO05D004577 3.9e-65 253.4 243 50.2
PGSC0003DMG400022225 Solanum tuberosum HOM05D003931 ORTHO05D004577 3.9e-65 253.4 237 51.1
Medtr3g051220 Medicago truncatula HOM05D003931 ORTHO05D004577 5.1e-65 253.1 250 49.6
Sc03g0008680 Simmondsia chinensis HOM05D003931 ORTHO05D004577 5.1e-65 253.1 247 50.2
CiPaw.11G187800 Carya illinoinensis HOM05D003931 ORTHO05D004577 6.7e-65 252.7 237 51.5
MD03G1205300 Malus domestica HOM05D003931 ORTHO05D004577 6.7e-65 252.7 238 51.7
Cfa020372 Carpinus fangiana HOM05D003931 ORTHO05D004577 8.8e-65 252.3 245 48.6
Lalb_Chr06g0171911 Lupinus albus HOM05D003931 ORTHO05D004577 1.1e-64 251.9 237 49.8
TWI38G0918 Tripterygium wilfordii HOM05D003931 ORTHO05D004577 1.1e-64 251.9 242 50.4
FAN16G2486 Fragaria x ananassa HOM05D003931 ORTHO05D004577 1.5e-64 251.5 242 50.8
Lalb_Chr02g0155621 Lupinus albus HOM05D003931 ORTHO05D004577 1.5e-64 251.5 238 50.0
PSO675G5012 Papaver somniferum HOM05D003931 ORTHO05D004577 1.5e-64 251.5 238 49.6
Sabra11G0123500 Salix brachista HOM05D003931 ORTHO05D004577 1.5e-64 251.5 237 50.2
FAN11G2983 Fragaria x ananassa HOM05D003931 ORTHO05D004577 2.0e-64 251.1 239 50.6
MD11G1221200 Malus domestica HOM05D003931 ORTHO05D004577 2.6e-64 250.8 238 50.4
FvH4_3g22400 Fragaria vesca HOM05D003931 ORTHO05D004577 3.3e-64 250.4 239 50.6
Prupe.4G210600 Prunus persica HOM05D003931 ORTHO05D004577 3.3e-64 250.4 248 48.8
Lsat_1_v5_gn_5_6180 Lactuca sativa HOM05D003931 ORTHO05D004577 4.4e-64 250.0 239 50.2
AUR62015742 Chenopodium quinoa HOM05D003931 ORTHO05D004577 5.7e-64 249.6 239 48.5
Eucgr.F00963 Eucalyptus grandis HOM05D003931 ORTHO05D004577 5.7e-64 249.6 237 49.8
Gorai.002G087700 Gossypium raimondii HOM05D003931 ORTHO05D004577 5.7e-64 249.6 237 50.6
FAN21G1679 Fragaria x ananassa HOM05D003931 ORTHO05D004577 9.7e-64 248.8 238 50.0
FAN21G3611 Fragaria x ananassa HOM05D003931 ORTHO05D004577 9.7e-64 248.8 238 50.0
TPR.G16574 Trifolium pratense HOM05D003931 ORTHO05D004577 9.7e-64 248.8 250 47.6
Peaxi162Scf00450g00075 Petunia axillaris HOM05D003931 ORTHO05D004577 1.3e-63 248.4 244 51.2
TAR626G0527 Trochodendron aralioides HOM05D003931 ORTHO05D004577 1.3e-63 248.4 241 48.1
AUR62020469 Chenopodium quinoa HOM05D003931 ORTHO05D004577 1.7e-63 248.1 237 48.5
Gohir.D01G065800 Gossypium hirsutum HOM05D003931 ORTHO05D004577 1.7e-63 248.1 237 50.2
RcHm_v2.0_Chr5g0039071 Rosa chinensis HOM05D003931 ORTHO05D004577 1.7e-63 248.1 238 50.0
Sc03g0008690 Simmondsia chinensis HOM05D003931 ORTHO05D004577 1.7e-63 248.1 237 49.4
Ca_14721_v3 Cicer arietinum L. HOM05D003931 ORTHO05D004577 2.2e-63 247.7 237 49.8
Ciclev10009005m.g Citrus clementina HOM05D003931 ORTHO05D004577 2.2e-63 247.7 237 49.8
Cc05_g13590 Coffea canephora HOM05D003931 ORTHO05D004577 2.2e-63 247.7 244 49.6
ATR0752G116 Amborella trichopoda HOM05D003931 ORTHO05D004577 2.8e-63 247.3 237 48.5
Hma1.2p1_1271F.1_g271720 Hydrangea macrophylla HOM05D003931 ORTHO05D004577 3.7e-63 246.9 238 48.7
Psat5g180680 Pisum sativum HOM05D003931 ORTHO05D004577 4.8e-63 246.5 237 50.2
Gohir.A01G078700 Gossypium hirsutum HOM05D003931 ORTHO05D004577 6.3e-63 246.1 237 49.8
PSO541G1838 Papaver somniferum HOM05D003931 ORTHO05D004577 6.3e-63 246.1 240 47.9
VMungo0540G1582 Vigna mungo HOM05D003931 ORTHO05D004577 6.3e-63 246.1 237 49.8
Cfa009708 Carpinus fangiana HOM05D003931 ORTHO05D004577 1.1e-62 245.4 217 52.5
vmacro11735 Vaccinium macrocarpon HOM05D003931 ORTHO05D004577 1.1e-62 245.4 246 48.8
BcaB03g12524 Brassica carinata HOM05D003931 ORTHO05D004577 1.4e-62 245.0 237 49.4
C01p23150 Brassica napus HOM05D003931 ORTHO05D004577 1.4e-62 245.0 237 48.9
Glyma.18G099500 Glycine max HOM05D003931 ORTHO05D004577 1.8e-62 244.6 237 50.2
CDE05G0277 Ceratophyllum demersum HOM05D003931 ORTHO05D007395 2.4e-62 244.2 251 45.8
Lj6g0018199 Lotus japonicus HOM05D003931 ORTHO05D004577 2.4e-62 244.2 237 50.2
Duzib213G0550 Durio zibethinus HOM05D003931 ORTHO05D004577 3.1e-62 243.8 235 49.8
Thhalv10027264m.g Eutrema salsugineum HOM05D003931 ORTHO05D004577 4.1e-62 243.4 237 48.5
Phvul.006G040800 Phaseolus vulgaris HOM05D003931 ORTHO05D004577 4.1e-62 243.4 237 49.4
Sabra16G0288300 Salix brachista HOM05D003931 ORTHO05D004577 4.1e-62 243.4 235 49.4
DCAR_008677 Daucus carota HOM05D003931 ORTHO05D004577 1.2e-61 241.9 239 47.7
BolC1t02250H Brassica oleracea HOM05D003931 ORTHO05D004577 1.5e-61 241.5 237 48.1
Thecc.07G042800 Theobroma cacao HOM05D003931 ORTHO05D004577 1.5e-61 241.5 238 47.9
HanXRQChr05g0159031 Helianthus annuus HOM05D003931 ORTHO05D004577 2.0e-61 241.1 251 48.6
QL08p011463 Quercus lobata HOM05D003931 ORTHO05D004577 2.0e-61 241.1 242 49.6
vmacro11734 Vaccinium macrocarpon HOM05D003931 ORTHO05D004577 2.6e-61 240.7 237 48.9
A08p20580 Brassica napus HOM05D003931 ORTHO05D004577 3.4e-61 240.4 237 48.1
BraA08t34014Z Brassica rapa HOM05D003931 ORTHO05D004577 4.5e-61 240.0 237 47.7
Actinidia09908 Actinidia chinensis HOM05D003931 ORTHO05D004577 5.9e-61 239.6 263 45.6
BraA01t01774Z Brassica rapa HOM05D003931 ORTHO05D004577 5.9e-61 239.6 237 47.7
Atru.chr2.3340 Acer truncatum HOM05D003931 ORTHO05D004577 7.7e-61 239.2 234 50.9
AL7G25800 Arabidopsis lyrata HOM05D003931 ORTHO05D004577 7.7e-61 239.2 237 48.5
BcaC07g38267 Brassica carinata HOM05D003931 ORTHO05D004577 7.7e-61 239.2 238 48.3
C08p10140 Brassica napus HOM05D003931 ORTHO05D004577 7.7e-61 239.2 238 48.3
BolC8t48692H Brassica oleracea HOM05D003931 ORTHO05D004577 7.7e-61 239.2 238 48.3
AT4G27030 Arabidopsis thaliana HOM05D003931 ORTHO05D004577 1.0e-60 238.8 236 47.9
A01p18190 Brassica napus HOM05D003931 ORTHO05D004577 1.0e-60 238.8 237 47.7
Atru.chr2.3337 Acer truncatum HOM05D003931 ORTHO05D004577 1.3e-60 238.4 234 50.4
CARHR234700 Cardamine hirsuta HOM05D003931 ORTHO05D004577 1.7e-60 238.0 236 48.7
Aa31LG5G10360 Aethionema arabicum HOM05D003931 ORTHO05D004577 2.9e-60 237.3 238 48.7
Carub.0007s1381 Capsella rubella HOM05D003931 ORTHO05D004577 2.9e-60 237.3 237 47.7
Glyma.08G314700 Glycine max HOM05D003931 ORTHO05D004577 2.9e-60 237.3 237 48.5
Migut.H01834 Erythranthe guttata HOM05D003931 ORTHO05D004577 6.5e-60 236.1 244 48.8
CARHR049940 Cardamine hirsuta HOM05D003931 ORTHO05D004577 1.4e-59 235.0 237 46.8
Nitab4.5_0004336g0020 Nicotiana tabacum HOM05D003931 ORTHO05D004577 1.4e-59 235.0 235 50.6
Migut.H01835 Erythranthe guttata HOM05D003931 ORTHO05D004577 2.5e-59 234.2 244 49.2
Migut.H01836 Erythranthe guttata HOM05D003931 ORTHO05D004577 3.2e-59 233.8 249 48.6
Lj6g0018599 Lotus japonicus HOM05D003931 ORTHO05D004577 3.2e-59 233.8 259 44.8
Sp7g25010 Schrenkiella parvula HOM05D003931 ORTHO05D004577 3.2e-59 233.8 237 47.3
AT1G62190 Arabidopsis thaliana HOM05D003931 ORTHO05D004577 2.7e-58 230.7 237 45.6
Carub.0002s0286 Capsella rubella HOM05D003931 ORTHO05D004577 2.7e-58 230.7 237 46.4
AUR62015741 Chenopodium quinoa HOM05D003931 ORTHO05D004577 2.7e-58 230.7 234 45.7
THA.LOC104809192 Tarenaya hassleriana HOM05D003931 ORTHO05D004577 4.7e-58 229.9 219 49.8
Thhalv10025879m.g Eutrema salsugineum HOM05D003931 ORTHO05D004577 6.1e-58 229.6 237 46.8
Rhsim06G0216100 Rhododendron simsii HOM05D003931 ORTHO05D004577 3.9e-57 226.9 201 52.7
Sp7g24990 Schrenkiella parvula HOM05D003931 ORTHO05D004577 3.9e-57 226.9 238 46.2
PGSC0003DMG400004435 Solanum tuberosum HOM05D003931 ORTHO05D004577 5.2e-57 226.5 249 45.4
Haze_23062 Corylus avellana HOM05D003931 ORTHO05D004577 6.7e-57 226.1 230 47.8
SGA_v2.0_scaffold9G05070 Striga asiatica HOM05D003931 ORTHO05D004577 6.7e-57 226.1 238 49.2
CANSAT11G0562 Cannabis sativa HOM05D003931 ORTHO05D004577 7.4e-56 222.6 220 47.7
Sc03g0008670 Simmondsia chinensis HOM05D003931 ORTHO05D004577 9.7e-56 222.2 237 46.0
SEGI_34207 Sequoiadendron giganteum HOM05D003931 ORTHO05D004577 1.3e-55 221.9 238 45.8
unitig_749.g13966 Utricularia gibba HOM05D003931 ORTHO05D004577 1.3e-55 221.9 239 45.2
Lsat_1_v5_gn_5_5140 Lactuca sativa HOM05D003931 ORTHO05D004577 1.7e-55 221.5 234 47.4
Sp7g25000 Schrenkiella parvula HOM05D003931 ORTHO05D004577 2.2e-55 221.1 238 47.1
Zm00001eb413170 Zea mays HOM05D003931 ORTHO05D004577 2.2e-55 221.1 223 50.2
Thhalv10026787m.g Eutrema salsugineum HOM05D003931 ORTHO05D004577 4.8e-55 219.9 228 47.4
BcaC06g32716 Brassica carinata HOM05D003931 ORTHO05D004577 6.3e-55 219.5 237 44.7
Aa31LG5G10380 Aethionema arabicum HOM05D003931 ORTHO05D004577 8.2e-55 219.2 234 45.3
C07p55050 Brassica napus HOM05D003931 ORTHO05D004577 1.8e-54 218.0 237 44.3
AT2G22890 Arabidopsis thaliana HOM05D003931 ORTHO05D004577 2.4e-54 217.6 250 42.8
BraA03t14771Z Brassica rapa HOM05D003931 ORTHO05D004577 7.0e-54 216.1 241 44.0
Carub.0004s0202 Capsella rubella HOM05D003931 ORTHO05D004577 9.1e-54 215.7 219 46.1
A03p57020 Brassica napus HOM05D003931 ORTHO05D004577 3.5e-53 213.8 237 43.9
AL4G12480 Arabidopsis lyrata HOM05D003931 ORTHO05D004577 4.5e-53 213.4 228 45.6
Os08g0187900 Oryza sativa ssp. japonica HOM05D003931 ORTHO05D004577 2.2e-52 211.1 225 48.0
BolC7t46007H Brassica oleracea HOM05D003931 ORTHO05D004577 6.5e-52 209.5 218 45.9
AagrBONN_evm.TU.Sc2ySwM_368.1941 Anthoceros agrestis HOM05D003931 ORTHO05D004577 1.5e-51 208.4 239 44.4
CSS0050113 Camellia sinensis var. sinensis HOM05D003931 ORTHO05D004577 5.5e-51 206.5 201 48.8
CANSAT11G1176 Cannabis sativa HOM05D003931 ORTHO05D004577 5.5e-51 206.5 223 47.1
Prupe.4G210500 Prunus persica HOM05D003931 ORTHO05D004577 7.2e-51 206.1 223 48.9
Mapoly0034s0071 Marchantia polymorpha HOM05D003931 ORTHO05D004577 6.1e-50 203.0 219 44.3
BcaB03g12523 Brassica carinata HOM05D003931 ORTHO05D004577 5.2e-49 199.9 235 43.4
SMO364G0503 Selaginella moellendorffii HOM05D003931 ORTHO05D004577 6.7e-49 199.5 227 46.3
BraA08t34015Z Brassica rapa HOM05D003931 ORTHO05D004577 3.7e-47 193.7 235 43.8
BcaC07g38264 Brassica carinata HOM05D003931 ORTHO05D004577 6.3e-47 193.0 235 43.8
BcaC07g38266 Brassica carinata HOM05D003931 ORTHO05D004577 8.2e-47 192.6 235 43.8
C08p10100 Brassica napus HOM05D003931 ORTHO05D004577 8.2e-47 192.6 235 43.8
BolC8t48689H Brassica oleracea HOM05D003931 ORTHO05D004577 8.2e-47 192.6 235 43.8
A08p20590 Brassica napus HOM05D003931 ORTHO05D004577 1.4e-46 191.8 235 43.4
QL09p032903 Quercus lobata HOM05D003931 ORTHO05D004577 2.0e-45 188.0 163 54.0
Pp3c13_12570 Physcomitrium patens HOM05D003931 ORTHO05D004577 1.3e-44 185.3 237 39.2
Aqoxy1G03270 Aquilegia oxysepala HOM05D003931 ORTHO05D004577 6.5e-44 183.0 230 41.3
Cre16.g673001 Chlamydomonas reinhardtii HOM05D003931 ORTHO05D004577 7.2e-43 179.5 266 38.0
MCO05G373 Micromonas commoda HOM05D003931 ORTHO05D004577 6.1e-42 176.4 193 42.5
Zm00001eb413200 Zea mays HOM05D003931 ORTHO05D004577 2.3e-41 174.5 224 43.3
BolC8t48691H Brassica oleracea HOM05D003931 ORTHO05D004577 3.0e-41 174.1 197 44.7
COL.COLO4_09644 Corchorus olitorius HOM05D003931 ORTHO05D004577 7.5e-40 169.5 237 38.4
FAN11G0561 Fragaria x ananassa HOM05D003931 ORTHO05D004577 2.8e-39 167.5 182 45.1
Cpa.g.sc97.27 Carica papaya HOM05D003931 ORTHO05D004577 2.4e-38 164.5 166 50.0
Haze_23061 Corylus avellana HOM05D003931 ORTHO05D004577 1.6e-37 161.8 449 29.4
PRCOL_00003954 Prasinoderma coloniale HOM05D003931 ORTHO05D004577 1.9e-35 154.8 219 41.1
CBR_g30523 Chara braunii HOM05D003931 ORTHO05D004577 8.9e-33 146.0 325 29.8
Cfa009711 Carpinus fangiana HOM05D003931 ORTHO05D004577 2.0e-32 144.8 185 43.2
COL.COLO4_07219 Corchorus olitorius HOM05D003931 ORTHO05D004577 2.0e-32 144.8 161 44.1
FvH4_3g22391 Fragaria vesca HOM05D003931 ORTHO05D004577 7.5e-32 142.9 176 40.9
CDE05G0281 Ceratophyllum demersum HOM05D003931 ORTHO05D004577 2.8e-31 141.0 152 45.4
Eucgr.L01106 Eucalyptus grandis HOM05D003931 ORTHO05D004577 1.8e-30 138.3 207 38.6
ECA246G1165 Erigeron canadensis HOM05D003931 ORTHO05D004577 3.5e-29 134.0 144 43.8
COL.COLO4_07218 Corchorus olitorius HOM05D003931 ORTHO05D004577 3.0e-25 120.9 109 51.4
AL3G48190 Arabidopsis lyrata HOM05D003931 ORTHO05D004577 5.8e-24 116.7 98 46.9
unitig_26.g9960 Utricularia gibba HOM05D003931 ORTHO05D004577 6.6e-20 103.2 87 57.5
C08p10120 Brassica napus HOM05D003931 ORTHO05D004577 8.0e-18 96.3 96 47.9
C01p23190 Brassica napus HOM05D003931 ORTHO05D004577 9.2e-14 82.8 90 45.6
BcaC06g32715 Brassica carinata HOM05D003931 ORTHO05D004577 6.6e-12 76.6 55 60.0
unitig_26.g9959 Utricularia gibba HOM05D001404 ORTHO05D026306 1.2e-08 65.9 43 60.5
BcaC09g50623 Brassica carinata HOM05D003931 ORTHO05D004577 4.9e-07 60.5 50 54.0


User provided reference genes

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