Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold97G29159 Striga asiatica HOM05D001529 ORTHO05D401536 1.9e-101 372.5 182 100.0
SGA_v2.0_scaffold170G38818 Striga asiatica HOM05D001529 ORTHO05D404896 9.8e-42 174.1 155 63.2
Dinv07847 Davidia involucrata HOM05D001529 ORTHO05D007595 1.9e-37 159.8 116 65.5
SGA_v2.0_scaffold49G18408 Striga asiatica HOM05D001529 ORTHO05D007595 2.5e-37 159.5 116 66.4
GSVIVG01030033001 Vitis vinifera HOM05D001529 ORTHO05D007595 3.3e-37 159.1 116 65.5
Duzib138G1061 Durio zibethinus HOM05D001529 ORTHO05D007595 7.3e-37 157.9 116 65.5
Hma1.2p1_0405F.1_g145720 Hydrangea macrophylla HOM05D001529 ORTHO05D007595 9.5e-37 157.5 116 64.7
Potri.014G162200 Populus trichocarpa HOM05D001529 ORTHO05D007595 9.5e-37 157.5 116 64.7
Ca_16364_v3 Cicer arietinum L. HOM05D001529 ORTHO05D007595 1.2e-36 157.1 116 62.9
Glyma.19G191200 Glycine max HOM05D001529 ORTHO05D007595 1.6e-36 156.8 114 63.2
TAR626G0907 Trochodendron aralioides HOM05D001529 ORTHO05D007595 1.6e-36 156.8 116 63.8
Nn1g03283 Nelumbo nucifera HOM05D001529 ORTHO05D007595 2.1e-36 156.4 116 63.8
Psat5g104480 Pisum sativum HOM05D001529 ORTHO05D007595 2.1e-36 156.4 116 62.9
PGR042G1774 Punica granatum HOM05D001529 ORTHO05D007595 2.1e-36 156.4 116 63.8
Lalb_Chr14g0362561 Lupinus albus HOM05D001529 ORTHO05D007595 2.8e-36 156.0 114 64.0
Sabra14G0123900 Salix brachista HOM05D001529 ORTHO05D007595 2.8e-36 156.0 116 62.9
AT2G04842 Arabidopsis thaliana HOM05D001529 ORTHO05D007595 3.6e-36 155.6 116 63.8
AL3G42430 Arabidopsis lyrata HOM05D001529 ORTHO05D007595 4.7e-36 155.2 116 63.8
Migut.H01288 Erythranthe guttata HOM05D001529 ORTHO05D007595 4.7e-36 155.2 114 64.0
MBI19_g06153_MAGBIO Magnolia biondii HOM05D001529 ORTHO05D007595 4.7e-36 155.2 116 62.9
Thecc.01G188800 Theobroma cacao HOM05D001529 ORTHO05D007595 4.7e-36 155.2 116 63.8
FvH4_6g41340 Fragaria vesca HOM05D001529 ORTHO05D007595 8.1e-36 154.5 115 62.6
TPR.G19324 Trifolium pratense HOM05D001529 ORTHO05D007595 8.1e-36 154.5 114 63.2
Carub.0003s2643 Capsella rubella HOM05D001529 ORTHO05D007595 1.1e-35 154.1 116 62.9
vmacro09386 Vaccinium macrocarpon HOM05D001529 ORTHO05D007595 1.1e-35 154.1 116 62.9
Atru.chr6.3341 Acer truncatum HOM05D001529 ORTHO05D007595 1.4e-35 153.7 115 64.3
Solyc07g048080.4 Solanum lycopersicum HOM05D001529 ORTHO05D007595 1.4e-35 153.7 116 62.9
Sopen07g024500 Solanum pennellii HOM05D001529 ORTHO05D007595 1.4e-35 153.7 116 62.9
Lj6g0006977 Lotus japonicus HOM05D001529 ORTHO05D007595 1.8e-35 153.3 114 62.3
RcHm_v2.0_Chr2g0156891 Rosa chinensis HOM05D001529 ORTHO05D007595 1.8e-35 153.3 114 62.3
MSTRG.12244 Avicennia marina HOM05D001529 ORTHO05D007595 2.3e-35 152.9 116 62.9
C03p55280 Brassica napus HOM05D001529 ORTHO05D007595 2.3e-35 152.9 116 62.9
BolC3t17800H Brassica oleracea HOM05D001529 ORTHO05D007595 2.3e-35 152.9 116 62.9
BraA03t13580Z Brassica rapa HOM05D001529 ORTHO05D007595 2.3e-35 152.9 116 62.9
Cc00_g04140 Coffea canephora HOM05D001529 ORTHO05D007595 2.3e-35 152.9 116 62.1
ECA234G3620 Erigeron canadensis HOM05D001529 ORTHO05D007595 2.3e-35 152.9 114 63.2
Gohir.A07G167800 Gossypium hirsutum HOM05D001529 ORTHO05D007595 2.3e-35 152.9 116 62.9
Gohir.D07G173400 Gossypium hirsutum HOM05D001529 ORTHO05D007595 2.3e-35 152.9 116 62.9
Gorai.001G193700 Gossypium raimondii HOM05D001529 ORTHO05D007595 2.3e-35 152.9 116 62.9
HanXRQChr10g0306381 Helianthus annuus HOM05D001529 ORTHO05D007595 2.3e-35 152.9 114 62.3
QL08p028982 Quercus lobata HOM05D001529 ORTHO05D007595 2.3e-35 152.9 116 62.9
QL93p0116_0063 Quercus lobata HOM05D001529 ORTHO05D007595 2.3e-35 152.9 116 62.9
Rhsim04G0043200 Rhododendron simsii HOM05D001529 ORTHO05D007595 2.3e-35 152.9 116 62.1
DCAR_021112 Daucus carota HOM05D001529 ORTHO05D007595 3.1e-35 152.5 114 64.0
Lj1C790T8 Lonicera japonica HOM05D001529 ORTHO05D007595 3.1e-35 152.5 114 63.2
arahy.Tifrunner.gnm1.ann1.TVN328 Arachis hypogaea HOM05D001529 ORTHO05D007595 4.0e-35 152.1 116 61.2
Thhalv10002438m.g Eutrema salsugineum HOM05D001529 ORTHO05D007595 4.0e-35 152.1 116 62.1
Lsat_1_v5_gn_5_123180 Lactuca sativa HOM05D001529 ORTHO05D007595 4.0e-35 152.1 115 61.7
Medtr3g083180 Medicago truncatula HOM05D001529 ORTHO05D007595 4.0e-35 152.1 116 61.2
PSO541G2760 Papaver somniferum HOM05D001529 ORTHO05D007595 4.0e-35 152.1 116 61.2
THA.LOC104815352 Tarenaya hassleriana HOM05D001529 ORTHO05D007595 4.0e-35 152.1 116 62.9
THA.LOC104826614 Tarenaya hassleriana HOM05D001529 ORTHO05D007595 4.0e-35 152.1 116 62.9
A03p44470 Brassica napus HOM05D001529 ORTHO05D007595 5.2e-35 151.8 116 62.1
PSO675G8054 Papaver somniferum HOM05D001529 ORTHO05D007595 5.2e-35 151.8 116 61.2
Aqoxy4G02192 Aquilegia oxysepala HOM05D001529 ORTHO05D007595 6.8e-35 151.4 114 62.3
TWI36G1606 Tripterygium wilfordii HOM05D001529 ORTHO05D007595 6.8e-35 151.4 116 62.1
CiPaw.03G277800 Carya illinoinensis HOM05D001529 ORTHO05D007595 8.9e-35 151.0 114 62.3
Eucgr.A01062 Eucalyptus grandis HOM05D001529 ORTHO05D007595 8.9e-35 151.0 114 63.2
Actinidia21451 Actinidia chinensis HOM05D001529 ORTHO05D007595 1.2e-34 150.6 116 62.1
FAN05G0710 Fragaria x ananassa HOM05D001529 ORTHO05D007595 1.5e-34 150.2 114 60.5
FAN09G0877 Fragaria x ananassa HOM05D001529 ORTHO05D007595 1.5e-34 150.2 114 60.5
Sc20g0003910 Simmondsia chinensis HOM05D001529 ORTHO05D007595 1.5e-34 150.2 116 61.2
arahy.Tifrunner.gnm1.ann1.6FNM9R Arachis hypogaea HOM05D001529 ORTHO05D007595 2.0e-34 149.8 116 60.3
arahy.Tifrunner.gnm1.ann1.9BA4YH Arachis hypogaea HOM05D001529 ORTHO05D007595 2.0e-34 149.8 116 60.3
ClCG02G002590 Citrullus lanatus HOM05D001529 ORTHO05D007595 2.0e-34 149.8 114 61.4
Manes.12G062800 Manihot esculenta HOM05D001529 ORTHO05D007595 2.0e-34 149.8 116 62.1
Sp3g23420 Schrenkiella parvula HOM05D001529 ORTHO05D007595 2.0e-34 149.8 114 62.3
Aa31sc53G50 Aethionema arabicum HOM05D001529 ORTHO05D007595 2.6e-34 149.4 114 62.3
CSS0013229 Camellia sinensis var. sinensis HOM05D001529 ORTHO05D007595 4.4e-34 148.7 114 62.3
CsaV3_7G002750 Cucumis sativus L. HOM05D001529 ORTHO05D007595 4.4e-34 148.7 114 60.5
Peaxi162Scf02035g00017 Petunia axillaris HOM05D001529 ORTHO05D007595 4.4e-34 148.7 128 58.6
CANSAT64G0296 Cannabis sativa HOM05D001529 ORTHO05D007595 5.8e-34 148.3 114 61.4
MELO3C024216.2 Cucumis melo HOM05D001529 ORTHO05D007595 7.6e-34 147.9 114 59.6
MD09G1120400 Malus domestica HOM05D001529 ORTHO05D007595 7.6e-34 147.9 114 61.4
Sed0023062 Sechium edule HOM05D001529 ORTHO05D007595 9.9e-34 147.5 114 60.5
VMungo1080G0307 Vigna mungo HOM05D001529 ORTHO05D007595 1.7e-33 146.7 114 60.5
CDE07G1746 Ceratophyllum demersum HOM05D001529 ORTHO05D007595 2.2e-33 146.4 116 60.3
Hund24142 Selenicereus undatus HOM05D001529 ORTHO05D007595 4.9e-33 145.2 113 59.3
Ah.06g192740 Amaranthus hybridus HOM05D001529 ORTHO05D007595 6.4e-33 144.8 116 57.8
ATR0712G164 Amborella trichopoda HOM05D001529 ORTHO05D007595 8.4e-33 144.4 114 59.6
EL10Ac4g09205 Beta vulgaris HOM05D001529 ORTHO05D007595 8.4e-33 144.4 116 57.8
PGSC0003DMG400006139 Solanum tuberosum HOM05D001529 ORTHO05D007595 1.1e-32 144.1 114 59.6
Os02g0538000 Oryza sativa ssp. japonica HOM05D001529 ORTHO05D007595 1.9e-32 143.3 114 58.8
Eucgr.A01066 Eucalyptus grandis HOM05D001529 ORTHO05D007595 2.4e-32 142.9 108 63.0
CAN.G897.4 Capsicum annuum HOM05D001529 ORTHO05D007595 3.2e-32 142.5 110 60.9
Zm00001eb325920 Zea mays HOM05D001529 ORTHO05D007595 4.1e-32 142.1 114 57.9
AUR62000956 Chenopodium quinoa HOM05D001529 ORTHO05D007595 5.4e-32 141.7 116 56.0
AUR62005012 Chenopodium quinoa HOM05D001529 ORTHO05D007595 5.4e-32 141.7 116 56.0
HPP92_022799 Vanilla planifolia HOM05D001529 ORTHO05D007595 7.1e-32 141.4 116 58.6
unitig_62.g23257 Utricularia gibba HOM05D001529 ORTHO05D007595 2.7e-31 139.4 116 57.8
SEGI_09505 Sequoiadendron giganteum HOM05D001529 ORTHO05D007595 5.1e-30 135.2 114 55.3
SMO145G0032 Selaginella moellendorffii HOM05D001529 ORTHO05D007595 1.9e-29 133.3 116 54.3
CARHR102830 Cardamine hirsuta HOM05D001529 ORTHO05D007595 2.8e-28 129.4 93 65.6
Hma1.2p1_0405F.1_g145730 Hydrangea macrophylla HOM05D001529 ORTHO05D007595 3.6e-28 129.0 141 48.9
Pp3c2_11130 Physcomitrium patens HOM05D001529 ORTHO05D007595 3.6e-28 129.0 114 53.5
CBR_g3851 Chara braunii HOM05D001529 ORTHO05D007595 1.1e-27 127.5 114 53.5
Pp3c14_20630 Physcomitrium patens HOM05D001529 ORTHO05D007595 1.4e-27 127.1 114 53.5
Mapoly0096s0034 Marchantia polymorpha HOM05D001529 ORTHO05D007595 1.8e-27 126.7 114 53.5
Phvul.009G238000 Phaseolus vulgaris HOM05D001529 ORTHO05D007595 3.1e-27 125.9 91 64.8
Eucgr.A01064 Eucalyptus grandis HOM05D001529 ORTHO05D007595 6.9e-27 124.8 114 57.0
Haze_12706 Corylus avellana HOM05D001529 ORTHO05D007595 1.3e-25 120.6 89 62.9
MCO11G246 Micromonas commoda HOM05D001529 ORTHO05D007595 1.4e-24 117.1 110 50.0
CSS0037422 Camellia sinensis var. sinensis HOM05D001529 ORTHO05D007595 5.4e-24 115.2 116 52.6
CSS0041772 Camellia sinensis var. sinensis HOM05D001529 ORTHO05D007595 5.4e-24 115.2 116 52.6
PRCOL_00005026 Prasinoderma coloniale HOM05D001529 ORTHO05D007595 1.6e-23 113.6 114 46.5
Ciclev10018290m.g Citrus clementina HOM05D001529 ORTHO05D007595 3.1e-19 99.4 93 53.8
Cre10.g421600 Chlamydomonas reinhardtii HOM05D001529 ORTHO05D007595 2.4e-16 89.7 149 36.2
SGA_v2.0_scaffold8G04401 Striga asiatica HOM05D001529 ORTHO05D399536 1.9e-13 80.1 50 78.0
Nitab4.5_0004215g0030 Nicotiana tabacum HOM05D001529 ORTHO05D007595 3.3e-13 79.3 62 56.5
Nitab4.5_0004358g0030 Nicotiana tabacum HOM05D001529 ORTHO05D007595 3.3e-13 79.3 62 56.5
Glyma.U010902 Glycine max HOM05D001529 ORTHO05D007595 5.6e-13 78.6 52 71.2
BcaB08g34492 Brassica carinata HOM05D001529 ORTHO05D007595 3.6e-12 75.9 50 74.0
MD15G1402000 Malus domestica HOM05D001529 ORTHO05D007595 8.1e-12 74.7 56 57.1
GSVIVG01030028001 Vitis vinifera HOM05D001529 ORTHO05D007595 5.3e-11 72.0 50 70.0
Prupe.3G203100 Prunus persica HOM05D001529 ORTHO05D007595 5.8e-10 68.6 50 66.0
FAN14G1621 Fragaria x ananassa HOM05D001529 ORTHO05D007595 1.7e-09 67.0 50 64.0
MD15G1401400 Malus domestica HOM05D001529 ORTHO05D018658 2.1e-07 60.1 68 44.1


User provided reference genes

Program Settings