Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold95G28748 Striga asiatica HOM05D003719 ORTHO05D004116 3.0e-216 755.0 401 100.0
SGA_v2.0_scaffold4G02229 Striga asiatica HOM05D003719 ORTHO05D004116 3.0e-107 392.9 412 60.9
Migut.N01648 Erythranthe guttata HOM05D003719 ORTHO05D004116 6.0e-100 368.6 413 56.2
MSTRG.4990 Avicennia marina HOM05D003719 ORTHO05D004116 5.3e-96 355.5 408 56.6
Oeu045633.2 Olea europaea HOM05D003719 ORTHO05D004116 8.5e-70 268.5 354 48.6
Oeu020240.1 Olea europaea HOM05D003719 ORTHO05D004116 6.7e-67 258.8 329 46.8
Dinv43515 Davidia involucrata HOM05D003719 ORTHO05D004116 5.9e-63 245.7 327 46.5
Dinv43958 Davidia involucrata HOM05D003719 ORTHO05D004116 1.0e-62 245.0 326 48.8
Oeu034882.1 Olea europaea HOM05D003719 ORTHO05D004116 3.2e-61 240.0 348 47.7
Oeu032776.1 Olea europaea HOM05D003719 ORTHO05D004116 9.4e-61 238.4 364 47.5
Oeu024948.1 Olea europaea HOM05D003719 ORTHO05D004116 8.2e-57 225.3 360 43.3
Actinidia05832 Actinidia chinensis HOM05D003719 ORTHO05D004116 4.5e-55 219.5 423 38.5
Actinidia31730 Actinidia chinensis HOM05D003719 ORTHO05D004116 5.0e-54 216.1 436 39.0
Nitab4.5_0000792g0110 Nicotiana tabacum HOM05D003719 ORTHO05D004116 7.2e-53 212.2 326 46.0
Nitab4.5_0025236g0010 Nicotiana tabacum HOM05D003719 ORTHO05D004116 4.7e-52 209.5 426 40.1
Hma1.2p1_0128F.1_g060060 Hydrangea macrophylla HOM05D003719 ORTHO05D004116 1.8e-51 207.6 419 38.9
Peaxi162Scf00245g00417 Petunia axillaris HOM05D003719 ORTHO05D004116 6.3e-49 199.1 371 38.5
Nitab4.5_0000050g0180 Nicotiana tabacum HOM05D003719 ORTHO05D004116 1.4e-48 198.0 370 41.6
Cc02_g26500 Coffea canephora HOM05D003719 ORTHO05D004116 9.1e-48 195.3 324 45.4
Migut.O00699 Erythranthe guttata HOM05D003719 ORTHO05D004116 5.9e-47 192.6 222 55.9
Nitab4.5_0003123g0030 Nicotiana tabacum HOM05D003719 ORTHO05D004116 8.5e-46 188.7 392 38.5
Rhsim07G0047900 Rhododendron simsii HOM05D003719 ORTHO05D004116 1.9e-45 187.6 449 35.9
unitig_0.g1580 Utricularia gibba HOM05D003719 ORTHO05D004116 2.1e-44 184.1 404 37.1
PGSC0003DMG400031112 Solanum tuberosum HOM05D003719 ORTHO05D004116 2.3e-43 180.6 335 42.7
Duzib128G0107 Durio zibethinus HOM05D003719 ORTHO05D004116 4.0e-43 179.9 333 38.1
Manes.09G133700 Manihot esculenta HOM05D003719 ORTHO05D004116 4.0e-43 179.9 424 35.8
Gohir.D11G317400 Gossypium hirsutum HOM05D003719 ORTHO05D004116 2.6e-42 177.2 338 38.5
Gorai.007G347200 Gossypium raimondii HOM05D003719 ORTHO05D004116 2.6e-42 177.2 338 38.5
Thecc.05G235300 Theobroma cacao HOM05D003719 ORTHO05D004116 2.6e-42 177.2 333 36.9
Gohir.A11G301800 Gossypium hirsutum HOM05D003719 ORTHO05D004116 3.3e-42 176.8 341 37.2
Duzib177G0203 Durio zibethinus HOM05D003719 ORTHO05D004116 5.7e-42 176.0 331 37.5
Peaxi162Scf00907g00023 Petunia axillaris HOM05D003719 ORTHO05D004116 7.5e-42 175.6 323 42.1
GSVIVG01019328001 Vitis vinifera HOM05D003719 ORTHO05D004116 2.8e-41 173.7 326 39.3
TAR629G0070 Trochodendron aralioides HOM05D003719 ORTHO05D004116 8.2e-41 172.2 336 39.3
HanXRQChr04g0117621 Helianthus annuus HOM05D003719 ORTHO05D004116 1.8e-40 171.0 426 36.9
Eucgr.E01743 Eucalyptus grandis HOM05D003719 ORTHO05D004116 2.4e-40 170.6 361 37.7
Sabra13G0061200 Salix brachista HOM05D003719 ORTHO05D004116 3.1e-40 170.2 334 37.4
Cpa.g.sc73.30 Carica papaya HOM05D003719 ORTHO05D004116 4.1e-40 169.9 326 40.5
RcHm_v2.0_Chr1g0340791 Rosa chinensis HOM05D003719 ORTHO05D004116 7.0e-40 169.1 334 38.6
vmacro13601 Vaccinium macrocarpon HOM05D003719 ORTHO05D004116 7.0e-40 169.1 462 35.7
Haze_15777 Corylus avellana HOM05D003719 ORTHO05D004116 9.1e-40 168.7 338 38.8
Sopen01g033060 Solanum pennellii HOM05D003719 ORTHO05D004116 9.1e-40 168.7 338 40.2
TWI60G0027 Tripterygium wilfordii HOM05D003719 ORTHO05D004116 3.5e-39 166.8 325 38.5
Lj9A617T60 Lonicera japonica HOM05D003719 ORTHO05D004116 1.3e-38 164.9 425 34.4
Manes.08G156200 Manihot esculenta HOM05D003719 ORTHO05D004116 2.2e-38 164.1 419 34.6
TWI32G1338 Tripterygium wilfordii HOM05D003719 ORTHO05D004116 6.5e-38 162.5 332 37.3
FvH4_7g08280 Fragaria vesca HOM05D003719 ORTHO05D004116 1.5e-37 161.4 338 37.9
Solyc01g081500.4 Solanum lycopersicum HOM05D003719 ORTHO05D004116 1.9e-37 161.0 411 37.7
Potri.013G070400 Populus trichocarpa HOM05D003719 ORTHO05D004116 7.2e-37 159.1 424 34.7
Potri.019G044400 Populus trichocarpa HOM05D003719 ORTHO05D004116 7.2e-37 159.1 419 35.3
QL04p053441 Quercus lobata HOM05D003719 ORTHO05D004116 9.4e-37 158.7 436 34.4
Hma1.2p1_0462F.1_g158020 Hydrangea macrophylla HOM05D003719 ORTHO05D004116 1.2e-36 158.3 295 39.0
Sabra19G0054700 Salix brachista HOM05D003719 ORTHO05D004116 1.2e-36 158.3 337 37.1
ClCG06G000580 Citrullus lanatus HOM05D003719 ORTHO05D004116 2.7e-36 157.1 403 33.7
CsaV3_6G006350 Cucumis sativus L. HOM05D003719 ORTHO05D004116 4.0e-35 153.3 402 32.6
MD02G1231000 Malus domestica HOM05D003719 ORTHO05D004116 5.2e-35 152.9 335 34.9
FAN10G3972 Fragaria x ananassa HOM05D003719 ORTHO05D004116 8.8e-35 152.1 344 36.0
MELO3C022484.2 Cucumis melo HOM05D003719 ORTHO05D004116 1.2e-34 151.8 402 33.3
Ciclev10031549m.g Citrus clementina HOM05D003719 ORTHO05D004116 2.6e-34 150.6 333 35.7
MD07G1081800 Malus domestica HOM05D003719 ORTHO05D004116 2.6e-34 150.6 345 35.1
FAN06G0622 Fragaria x ananassa HOM05D003719 ORTHO05D004116 3.4e-34 150.2 353 35.7
CiPaw.02G047600 Carya illinoinensis HOM05D003719 ORTHO05D004116 5.7e-34 149.4 421 33.7
Nn1g09363 Nelumbo nucifera HOM05D003719 ORTHO05D004116 5.7e-34 149.4 390 33.8
PGR042G1172 Punica granatum HOM05D003719 ORTHO05D004116 1.7e-33 147.9 319 36.4
Atru.chr2.1627 Acer truncatum HOM05D003719 ORTHO05D004116 2.8e-33 147.1 344 37.5
CANSAT25G2268 Cannabis sativa HOM05D003719 ORTHO05D004116 1.1e-32 145.2 330 36.7
ECA236G3956 Erigeron canadensis HOM05D001257 ORTHO05D005285 2.7e-31 140.6 410 34.6
Lj3g0017682 Lotus japonicus HOM05D003719 ORTHO05D004116 7.7e-31 139.0 332 33.1
Lsat_1_v5_gn_7_34101 Lactuca sativa HOM05D003719 ORTHO05D004116 1.0e-30 138.7 371 33.2
MBI04_g06283_MAGBIO Magnolia biondii HOM05D003719 ORTHO05D004116 1.0e-30 138.7 340 34.1
Migut.O00700 Erythranthe guttata HOM05D003719 ORTHO05D004116 1.7e-30 137.9 142 57.0
CARHR195490 Cardamine hirsuta HOM05D003719 ORTHO05D004116 2.3e-30 137.5 339 35.1
Sed0010466 Sechium edule HOM05D003719 ORTHO05D004116 2.3e-30 137.5 422 32.9
Sed0012975 Sechium edule HOM05D003719 ORTHO05D004116 2.9e-30 137.1 384 31.5
EL10Ac1g00661 Beta vulgaris HOM05D003719 ORTHO05D004116 5.0e-30 136.3 341 34.0
AL6G28780 Arabidopsis lyrata HOM05D003719 ORTHO05D004116 6.5e-30 136.0 334 37.4
Hund17170 Selenicereus undatus HOM05D003719 ORTHO05D000105 8.6e-30 135.6 332 33.1
Phvul.009G117500 Phaseolus vulgaris HOM05D003719 ORTHO05D004116 1.1e-29 135.2 313 35.5
Carub.0006s1593 Capsella rubella HOM05D003719 ORTHO05D004116 1.9e-29 134.4 333 34.2
Thhalv10013571m.g Eutrema salsugineum HOM05D003719 ORTHO05D004116 1.9e-29 134.4 336 33.9
Lsat_1_v5_gn_1_89600 Lactuca sativa HOM05D003719 ORTHO05D004116 2.5e-29 134.0 405 33.8
Prupe.2G107000 Prunus persica HOM05D003719 ORTHO05D004116 2.5e-29 134.0 307 35.5
THA.LOC104802889 Tarenaya hassleriana HOM05D003719 ORTHO05D004116 3.2e-29 133.7 324 33.6
Sc02g0003460 Simmondsia chinensis HOM05D003719 ORTHO05D004116 7.2e-29 132.5 338 31.1
Glyma.16G079900 Glycine max HOM05D003719 ORTHO05D004116 6.1e-28 129.4 320 34.4
Sp6g26530 Schrenkiella parvula HOM05D003719 ORTHO05D004116 1.4e-27 128.3 342 34.2
ClCG05G002450 Citrullus lanatus HOM05D003719 ORTHO05D004116 3.0e-27 127.1 397 31.0
Aqoxy7G02508 Aquilegia oxysepala HOM05D003719 ORTHO05D004116 4.0e-27 126.7 336 34.5
AT5G17690 Arabidopsis thaliana HOM05D003719 ORTHO05D004116 5.2e-27 126.3 335 35.2
VMungo0331G0617 Vigna mungo HOM05D003719 ORTHO05D004116 5.2e-27 126.3 423 33.3
THA.LOC104827246 Tarenaya hassleriana HOM05D003719 ORTHO05D004116 1.2e-26 125.2 409 31.1
Ah.05g177100 Amaranthus hybridus HOM05D003719 ORTHO05D004116 2.0e-26 124.4 323 31.6
arahy.Tifrunner.gnm1.ann1.N569AS Arachis hypogaea HOM05D003719 ORTHO05D004116 2.6e-26 124.0 328 32.6
BcaB08g36751 Brassica carinata HOM05D003719 ORTHO05D004116 2.6e-26 124.0 336 33.0
VMungo1309G0350 Vigna mungo HOM05D003719 ORTHO05D004116 2.6e-26 124.0 318 33.6
BraA09t37591Z Brassica rapa HOM05D003719 ORTHO05D004116 4.4e-26 123.2 329 33.4
THA.LOC104820814 Tarenaya hassleriana HOM05D003719 ORTHO05D004116 1.7e-25 121.3 433 31.9
FAN03G1006 Fragaria x ananassa HOM05D003719 ORTHO05D004116 2.2e-25 120.9 333 33.0
Phvul.010G034600 Phaseolus vulgaris HOM05D003719 ORTHO05D004116 6.3e-25 119.4 432 33.1
A10p21730 Brassica napus HOM05D003719 ORTHO05D004116 8.3e-25 119.0 330 35.2
BraA10t44234Z Brassica rapa HOM05D003719 ORTHO05D004116 8.3e-25 119.0 330 35.2
BcaC04g18768 Brassica carinata HOM05D003719 ORTHO05D004116 1.1e-24 118.6 327 33.9
C09p59480 Brassica napus HOM05D003719 ORTHO05D004116 1.1e-24 118.6 327 33.9
BolC9t58786H Brassica oleracea HOM05D003719 ORTHO05D004116 1.1e-24 118.6 327 33.9
BolC2t06833H Brassica oleracea HOM05D003719 ORTHO05D004116 1.4e-24 118.2 332 33.4
PSO017G6528 Papaver somniferum HOM05D003719 ORTHO05D004116 1.4e-24 118.2 322 31.7
C02p09250 Brassica napus HOM05D003719 ORTHO05D004116 2.4e-24 117.5 333 33.3
PSO170G0628 Papaver somniferum HOM05D003719 ORTHO05D004116 3.1e-24 117.1 348 30.5
CDE11G0837 Ceratophyllum demersum HOM05D003719 ORTHO05D004116 4.1e-24 116.7 354 32.5
AUR62038028 Chenopodium quinoa HOM05D003719 ORTHO05D004116 5.4e-24 116.3 321 31.5
BcaC03g13534 Brassica carinata HOM05D003719 ORTHO05D004116 1.2e-23 115.2 333 33.0
A02p04380 Brassica napus HOM05D003719 ORTHO05D004116 2.7e-23 114.0 379 31.9
BraA02t05402Z Brassica rapa HOM05D003719 ORTHO05D004116 3.5e-23 113.6 379 31.9
Aa31LG11G11940 Aethionema arabicum HOM05D003719 ORTHO05D004116 4.5e-23 113.2 327 32.1
AUR62014507 Chenopodium quinoa HOM05D003719 ORTHO05D004116 4.5e-23 113.2 305 31.8
Os10g0324900 Oryza sativa ssp. japonica HOM05D003719 ORTHO05D004116 5.9e-23 112.8 353 31.7
Glyma.03G094200 Glycine max HOM05D003719 ORTHO05D004116 7.8e-23 112.5 431 31.1
PGSC0003DMG400031514 Solanum tuberosum HOM05D003719 ORTHO05D004116 7.8e-23 112.5 517 27.3
arahy.Tifrunner.gnm1.ann1.U92JU2 Arachis hypogaea HOM05D003719 ORTHO05D004116 1.0e-22 112.1 423 29.3
ATR0568G049 Amborella trichopoda HOM05D003719 ORTHO05D004116 1.3e-22 111.7 343 32.9
Sed0017190 Sechium edule HOM05D003719 ORTHO05D004116 1.3e-22 111.7 329 32.5
ECA248G2234 Erigeron canadensis HOM05D003719 ORTHO05D004116 2.9e-22 110.5 324 29.6
TPR.G9787 Trifolium pratense HOM05D003719 ORTHO05D004116 1.5e-21 108.2 422 30.8
Ca_23168_v3 Cicer arietinum L. HOM05D003719 ORTHO05D004116 5.6e-21 106.3 428 31.8
Sopen10g009690 Solanum pennellii HOM05D003719 ORTHO05D004116 9.5e-21 105.5 213 39.4
SHI54853 Sapria himalayana HOM05D003719 ORTHO05D004116 1.6e-20 104.8 319 32.0
TPR.G38555 Trifolium pratense HOM05D001257 ORTHO05D005285 2.1e-20 104.4 314 33.1
Solyc10g024470.3 Solanum lycopersicum HOM05D003719 ORTHO05D004116 2.8e-20 104.0 213 39.0
FAN01G0294 Fragaria x ananassa HOM05D003719 ORTHO05D004116 1.0e-19 102.1 255 35.7
Hund26916 Selenicereus undatus HOM05D003719 ORTHO05D004116 1.4e-19 101.7 325 29.8
CsaV3_3G009890 Cucumis sativus L. HOM05D002544 ORTHO05D007277 5.2e-19 99.8 329 31.3
Ca_15283_v3 Cicer arietinum L. HOM05D003719 ORTHO05D004116 6.8e-19 99.4 288 31.2
Ca_15419_v3 Cicer arietinum L. HOM05D003719 ORTHO05D004116 6.8e-19 99.4 288 31.2
HPP92_020485 Vanilla planifolia HOM05D003719 ORTHO05D004116 6.8e-19 99.4 342 27.8
COL.COLO4_32214 Corchorus olitorius HOM05D003719 ORTHO05D004116 2.6e-18 97.4 279 32.3
DCAR_025000 Daucus carota HOM05D003719 ORTHO05D004116 4.4e-18 96.7 272 33.8
DCAR_015727 Daucus carota HOM05D003719 ORTHO05D004116 4.9e-17 93.2 243 35.4
Psat5g001120 Pisum sativum HOM05D003719 ORTHO05D004116 1.1e-16 92.0 319 31.0
HanXRQChr11g0343451 Helianthus annuus HOM05D003719 ORTHO05D004116 1.8e-16 91.3 400 27.2
Lalb_Chr23g0264911 Lupinus albus HOM05D003719 ORTHO05D004116 4.1e-16 90.1 329 28.6
DCAR_029570 Daucus carota HOM05D003719 ORTHO05D004116 7.0e-16 89.4 345 27.8
Glyma.06G001700 Glycine max HOM05D003719 ORTHO05D004116 7.0e-16 89.4 357 29.1
Ah.05g177090 Amaranthus hybridus HOM05D000308 ORTHO05D005285 1.7e-14 84.7 332 28.9
Nn7g37398 Nelumbo nucifera HOM05D003719 ORTHO05D004116 2.3e-14 84.3 61 65.6
Lalb_Chr13g0290971 Lupinus albus HOM05D003719 ORTHO05D004116 3.0e-14 84.0 320 28.8
Lalb_Chr07g0194591 Lupinus albus HOM05D003719 ORTHO05D004116 3.9e-14 83.6 321 29.3
BraA09t38097Z Brassica rapa HOM05D003719 ORTHO05D004116 8.6e-14 82.4 200 34.5
Lalb_Chr12g0210141 Lupinus albus HOM05D003719 ORTHO05D004116 5.6e-13 79.7 323 28.8
PSO732G0471 Papaver somniferum HOM05D003719 ORTHO05D004116 9.5e-13 79.0 316 29.7
Glyma.04G002100 Glycine max HOM05D003719 ORTHO05D004116 1.6e-12 78.2 354 28.0
PSO732G0498 Papaver somniferum HOM05D003719 ORTHO05D004116 4.7e-12 76.6 316 29.4
PSO732G0548 Papaver somniferum HOM05D003719 ORTHO05D004116 1.1e-11 75.5 316 29.1
HanXRQChr04g0117671 Helianthus annuus HOM05D003719 ORTHO05D004116 5.2e-11 73.2 90 44.4
Psat4g207560 Pisum sativum HOM05D003719 ORTHO05D004116 2.6e-10 70.9 73 52.1
Glyma.03G111600 Glycine max HOM05D003719 ORTHO05D004116 3.4e-10 70.5 261 30.7
PSO017G2223 Papaver somniferum HOM05D003719 ORTHO05D004116 2.2e-09 67.8 256 30.1
Lalb_Chr10g0091841 Lupinus albus HOM05D003719 ORTHO05D004116 3.7e-09 67.0 67 47.8
PSO170G3936 Papaver somniferum HOM05D033783 ORTHO05D004116 3.7e-09 67.0 71 50.7
PSO017G2979 Papaver somniferum HOM05D033783 ORTHO05D004116 6.4e-09 66.2 70 51.4
PSO675G5773 Papaver somniferum HOM05D003719 ORTHO05D004116 2.4e-08 64.3 75 48.0
Mapoly0009s0028 Marchantia polymorpha HOM05D003719 ORTHO05D004116 5.4e-08 63.2 72 43.1
Pp3c9_6410 Physcomitrium patens HOM05D003719 ORTHO05D004116 1.6e-07 61.6 71 43.7
PSO017G0756 Papaver somniferum HOM05D003719 ORTHO05D004116 2.0e-07 61.2 58 48.3
arahy.Tifrunner.gnm1.ann1.E07VAV Arachis hypogaea HOM05D003719 ORTHO05D004116 1.3e-06 58.5 333 26.4
Lalb_Chr13g0290921 Lupinus albus HOM05D003719 ORTHO05D004116 1.7e-06 58.2 118 35.6
A03p08460 Brassica napus HOM05D003719 ORTHO05D004116 5.0e-06 56.6 144 35.4
C03p09860 Brassica napus HOM05D003719 ORTHO05D004116 5.0e-06 56.6 147 36.7
BraA03t10169Z Brassica rapa HOM05D003719 ORTHO05D004116 5.0e-06 56.6 144 35.4


User provided reference genes

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