Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold95G28736 Striga asiatica HOM05D006268 ORTHO05D008118 2.3e-139 498.8 245 100.0
MSTRG.4977 Avicennia marina HOM05D006268 ORTHO05D008118 1.1e-93 347.1 247 73.7
SalBow4G0743 Salvia bowleyana HOM05D006268 ORTHO05D008118 3.7e-92 342.0 241 69.3
DCAR_029548 Daucus carota HOM05D006268 ORTHO05D008118 2.1e-87 326.2 245 67.8
Migut.N01815 Erythranthe guttata HOM05D006268 ORTHO05D008118 1.8e-86 323.2 247 67.2
Nitab4.5_0001209g0060 Nicotiana tabacum HOM05D006268 ORTHO05D008118 2.3e-86 322.8 246 67.9
CAN.G1551.1 Capsicum annuum HOM05D006268 ORTHO05D008118 1.5e-85 320.1 245 66.1
Solyc01g080940.3 Solanum lycopersicum HOM05D006268 ORTHO05D008118 1.5e-85 320.1 245 66.5
Actinidia33290 Actinidia chinensis HOM05D006268 ORTHO05D008118 2.6e-85 319.3 246 68.3
PGSC0003DMG400001820 Solanum tuberosum HOM05D006268 ORTHO05D008118 1.3e-84 317.0 245 65.7
Rhsim01G0145800 Rhododendron simsii HOM05D006268 ORTHO05D008118 2.8e-84 315.8 244 65.6
CANSAT54G1338 Cannabis sativa HOM05D006268 ORTHO05D008118 4.8e-84 315.1 249 63.9
vmacro21105 Vaccinium macrocarpon HOM05D006268 ORTHO05D008118 1.1e-83 313.9 244 64.8
Nitab4.5_0001476g0040 Nicotiana tabacum HOM05D006268 ORTHO05D008118 1.4e-83 313.5 246 65.4
Sopen01g032530 Solanum pennellii HOM05D006268 ORTHO05D008118 2.4e-83 312.8 245 66.1
Ca_23170_v3 Cicer arietinum L. HOM05D006268 ORTHO05D008118 1.2e-82 310.5 245 64.5
GSVIVG01016051001 Vitis vinifera HOM05D006268 ORTHO05D008118 1.2e-82 310.5 246 64.2
Atru.BG.53.p Acer truncatum HOM05D006268 ORTHO05D008118 1.5e-82 310.1 244 65.2
Lalb_Chr07g0194551 Lupinus albus HOM05D006268 ORTHO05D008118 1.5e-82 310.1 245 64.1
HanXRQChr04g0123661 Helianthus annuus HOM05D006268 ORTHO05D008118 5.9e-82 308.1 240 65.8
TAR375G0229 Trochodendron aralioides HOM05D006268 ORTHO05D008118 7.7e-82 307.8 248 63.7
Sc26g0001930 Simmondsia chinensis HOM05D006268 ORTHO05D008118 1.3e-81 307.0 245 65.3
CiPaw.13G019100 Carya illinoinensis HOM05D006268 ORTHO05D008118 2.2e-81 306.2 246 66.3
Lj3g0019214 Lotus japonicus HOM05D006268 ORTHO05D008118 2.2e-81 306.2 246 65.0
VMungo0331G0592 Vigna mungo HOM05D006268 ORTHO05D008118 3.8e-81 305.4 245 64.5
MD00G1098400 Malus domestica HOM05D006268 ORTHO05D008118 6.5e-81 304.7 246 63.8
CSS0005578 Camellia sinensis var. sinensis HOM05D006268 ORTHO05D008118 8.5e-81 304.3 245 65.7
QL04p024264 Quercus lobata HOM05D006268 ORTHO05D008118 1.1e-80 303.9 246 64.6
Glyma.16G080700 Glycine max HOM05D006268 ORTHO05D008118 1.4e-80 303.5 246 64.6
Aqoxy3G02409 Aquilegia oxysepala HOM05D006268 ORTHO05D008118 2.5e-80 302.8 244 63.5
Aqoxy3G02437 Aquilegia oxysepala HOM05D006268 ORTHO05D008118 2.5e-80 302.8 244 63.5
Cc02_g26120 Coffea canephora HOM05D006268 ORTHO05D008118 2.5e-80 302.8 244 63.9
CsaV3_3G010120 Cucumis sativus L. HOM05D006268 ORTHO05D008118 3.2e-80 302.4 246 63.8
Psat4g207400 Pisum sativum HOM05D006268 ORTHO05D008118 4.2e-80 302.0 245 63.3
Eucgr.D01130 Eucalyptus grandis HOM05D006268 ORTHO05D008118 5.5e-80 301.6 245 60.4
Potri.002G238300 Populus trichocarpa HOM05D006268 ORTHO05D008118 5.5e-80 301.6 245 63.7
Cfa010996 Carpinus fangiana HOM05D006268 ORTHO05D008118 7.2e-80 301.2 246 64.6
Lsat_1_v5_gn_7_10860 Lactuca sativa HOM05D006268 ORTHO05D008118 7.2e-80 301.2 241 65.6
MELO3C006233.2 Cucumis melo HOM05D006268 ORTHO05D008118 9.4e-80 300.8 246 63.8
CSS0033423 Camellia sinensis var. sinensis HOM05D006268 ORTHO05D008118 1.2e-79 300.4 245 65.3
Haze_02942 Corylus avellana HOM05D006268 ORTHO05D008118 1.2e-79 300.4 245 64.5
Phvul.010G033866 Phaseolus vulgaris HOM05D006268 ORTHO05D008118 1.2e-79 300.4 243 65.0
Glyma.03G093200 Glycine max HOM05D006268 ORTHO05D008118 2.7e-79 299.3 246 63.8
FAN03G0807 Fragaria x ananassa HOM05D006268 ORTHO05D008118 3.6e-79 298.9 244 62.7
Gohir.A06G169600 Gossypium hirsutum HOM05D006268 ORTHO05D008118 3.6e-79 298.9 245 64.9
Sed0013667 Sechium edule HOM05D006268 ORTHO05D008118 3.6e-79 298.9 245 63.3
Sabra02G0181600 Salix brachista HOM05D006268 ORTHO05D008118 6.1e-79 298.1 242 63.6
FAN06G0712 Fragaria x ananassa HOM05D006268 ORTHO05D008118 2.3e-78 296.2 244 62.3
FvH4_7g08020 Fragaria vesca HOM05D006268 ORTHO05D008118 3.0e-78 295.8 245 62.9
RcHm_v2.0_Chr1g0341291 Rosa chinensis HOM05D006268 ORTHO05D008118 3.0e-78 295.8 244 62.3
Prupe.2G109200 Prunus persica HOM05D006268 ORTHO05D008118 3.9e-78 295.4 246 61.0
FAN01G0355 Fragaria x ananassa HOM05D006268 ORTHO05D008118 5.2e-78 295.0 244 61.9
PGR083G0810 Punica granatum HOM05D006268 ORTHO05D008118 8.8e-78 294.3 245 62.0
Gorai.N008000 Gossypium raimondii HOM05D006268 ORTHO05D008118 1.1e-77 293.9 245 62.4
Medtr8g010550 Medicago truncatula HOM05D006268 ORTHO05D008118 2.0e-77 293.1 246 60.6
unitig_22.g5778 Utricularia gibba HOM05D006268 ORTHO05D008118 2.0e-77 293.1 242 62.8
Nn1g00551 Nelumbo nucifera HOM05D006268 ORTHO05D008118 5.7e-77 291.6 246 63.8
TWI59G0917 Tripterygium wilfordii HOM05D006268 ORTHO05D008118 2.2e-76 289.7 245 61.2
Ciclev10021110m.g Citrus clementina HOM05D006268 ORTHO05D008118 8.2e-76 287.7 245 61.2
PSO063G1446 Papaver somniferum HOM05D006268 ORTHO05D008118 5.3e-75 285.0 247 59.9
PSO782G1498 Papaver somniferum HOM05D006268 ORTHO05D008118 9.1e-75 284.3 247 59.9
Thhalv10014126m.g Eutrema salsugineum HOM05D006268 ORTHO05D008118 1.6e-74 283.5 239 61.1
Os03g0390700 Oryza sativa ssp. japonica HOM05D006268 ORTHO05D008118 3.5e-74 282.3 248 58.9
Thecc.03G001300 Theobroma cacao HOM05D006268 ORTHO05D008118 4.5e-74 282.0 245 60.8
C02p13500 Brassica napus HOM05D006268 ORTHO05D008118 1.7e-73 280.0 239 61.5
BolC2t07462H Brassica oleracea HOM05D006268 ORTHO05D008118 1.7e-73 280.0 239 61.5
AUR62023342 Chenopodium quinoa HOM05D006268 ORTHO05D008118 1.7e-73 280.0 246 59.3
BcaC03g14111 Brassica carinata HOM05D006268 ORTHO05D008118 3.8e-73 278.9 239 61.1
BcaB05g22409 Brassica carinata HOM05D006268 ORTHO05D008118 5.0e-73 278.5 239 61.5
BraA02t05859Z Brassica rapa HOM05D006268 ORTHO05D008118 6.5e-73 278.1 239 61.5
Ah.06g189690 Amaranthus hybridus HOM05D006268 ORTHO05D008118 1.9e-72 276.6 246 57.7
A02p07860 Brassica napus HOM05D006268 ORTHO05D008118 5.5e-72 275.0 239 60.7
EL10Ac1g00692 Beta vulgaris HOM05D006268 ORTHO05D008118 1.2e-71 273.9 246 58.5
COL.COLO4_19510 Corchorus olitorius HOM05D006268 ORTHO05D006513 1.6e-71 273.5 240 60.4
Zm00001eb392560 Zea mays HOM05D006268 ORTHO05D008118 2.7e-71 272.7 239 58.6
Duzib128G0100 Durio zibethinus HOM05D006268 ORTHO05D008118 6.1e-71 271.6 256 57.4
AL8G34320 Arabidopsis lyrata HOM05D006268 ORTHO05D008118 1.0e-70 270.8 240 58.3
ClCG05G002670 Citrullus lanatus HOM05D006268 ORTHO05D008118 4.4e-69 265.4 246 57.7
THA.LOC104799599 Tarenaya hassleriana HOM05D006268 ORTHO05D008118 1.3e-68 263.8 247 56.3
Aa31LG11G10 Aethionema arabicum HOM05D006268 ORTHO05D008118 8.2e-68 261.2 244 55.7
AT5G58220 Arabidopsis thaliana HOM05D006268 ORTHO05D008118 4.1e-67 258.8 240 56.2
CARHR272020 Cardamine hirsuta HOM05D006268 ORTHO05D008118 4.1e-67 258.8 240 55.8
Hund26937 Selenicereus undatus HOM05D006268 ORTHO05D008118 2.0e-66 256.5 245 53.5
arahy.Tifrunner.gnm1.ann1.V3PJPX Arachis hypogaea HOM05D006268 ORTHO05D008118 4.5e-66 255.4 214 60.7
HPP92_028001 Vanilla planifolia HOM05D006268 ORTHO05D008118 4.5e-66 255.4 240 55.0
arahy.Tifrunner.gnm1.ann1.EHLP6C Arachis hypogaea HOM05D006268 ORTHO05D008118 7.7e-66 254.6 214 60.3
Sp6g19880 Schrenkiella parvula HOM05D006268 ORTHO05D008118 5.0e-65 251.9 239 55.2
TPR.G9770 Trifolium pratense HOM05D006268 ORTHO05D008118 4.2e-64 248.8 242 56.2
Carub.0008s1876 Capsella rubella HOM05D006268 ORTHO05D008118 9.4e-64 247.7 240 55.4
FAN10G2079 Fragaria x ananassa HOM05D006268 ORTHO05D008118 9.4e-64 247.7 214 60.7
ATR0049G059 Amborella trichopoda HOM05D006268 ORTHO05D008118 4.0e-62 242.3 250 52.4
SEGI_16160 Sequoiadendron giganteum HOM05D006268 ORTHO05D008118 8.3e-60 234.6 262 50.0
AUR62013813 Chenopodium quinoa HOM05D006268 ORTHO05D008118 3.1e-59 232.6 242 55.8
ECA236G2174 Erigeron canadensis HOM05D006268 ORTHO05D008118 7.0e-59 231.5 213 59.2
Manes.08G055700 Manihot esculenta HOM05D006268 ORTHO05D008118 7.2e-56 221.5 205 59.5
BcaB05g22411 Brassica carinata HOM05D006268 ORTHO05D008118 1.3e-49 200.7 192 56.8
Pp3c4_10360 Physcomitrium patens HOM05D006268 ORTHO05D008118 1.3e-49 200.7 245 46.9
SMO367G0371 Selaginella moellendorffii HOM05D006268 ORTHO05D008118 1.7e-49 200.3 271 42.8
Lj7C555T10 Lonicera japonica HOM05D006268 ORTHO05D008118 6.8e-46 188.3 153 64.1
Dinv43994 Davidia involucrata HOM05D006268 ORTHO05D008118 4.4e-45 185.7 146 66.4
Mapoly0090s0043 Marchantia polymorpha HOM05D006268 ORTHO05D008118 4.9e-44 182.2 252 42.5
CDE04G2879 Ceratophyllum demersum HOM05D006268 ORTHO05D008118 6.4e-44 181.8 185 52.4
CBR_g30589 Chara braunii HOM05D006268 ORTHO05D008118 6.6e-41 171.8 361 33.5
Cre17.g735950 Chlamydomonas reinhardtii HOM05D006268 ORTHO05D008118 8.6e-41 171.4 251 39.8
AagrBONN_evm.TU.Sc2ySwM_228.2734 Anthoceros agrestis HOM05D006268 ORTHO05D008118 2.5e-40 169.9 225 43.1
PRCOL_00004243 Prasinoderma coloniale HOM05D006268 ORTHO05D008118 1.1e-38 164.5 246 39.4
SHI28983 Sapria himalayana HOM05D006268 ORTHO05D008118 6.0e-34 148.7 158 45.6
Sc26g0001910 Simmondsia chinensis HOM05D006268 ORTHO05D008118 1.2e-29 134.4 107 60.7
BolC9t57859H Brassica oleracea HOM05D006268 ORTHO05D008118 2.4e-27 126.7 81 71.6
Lj7C555G14 Lonicera japonica HOM05D006268 ORTHO05D008118 6.6e-25 118.6 88 69.3
DCAR_025012 Daucus carota HOM05D006268 ORTHO05D008118 1.1e-22 111.3 66 78.8
MCO05G065 Micromonas commoda HOM05D006268 ORTHO05D008118 4.9e-20 102.4 135 42.2
SMO197G0011 Selaginella moellendorffii HOM05D006268 ORTHO05D008118 4.0e-14 82.8 66 62.1
BcaC04g19902 Brassica carinata HOM05D006268 ORTHO05D008118 3.4e-13 79.7 56 64.3
MD02G1236900 Malus domestica HOM05D006268 ORTHO05D008118 3.8e-12 76.3 135 42.2
Dinv43550 Davidia involucrata HOM05D006268 ORTHO05D008118 2.4e-11 73.6 55 70.9
SMO367G0431 Selaginella moellendorffii HOM05D006268 ORTHO05D008118 5.4e-11 72.4 67 56.7
MCO07G440 Micromonas commoda HOM05D006268 ORTHO05D008118 7.1e-11 72.0 63 60.3
Sabra14G0137200 Salix brachista HOM05D008143 ORTHO05D010256 1.6e-10 70.9 77 45.5
C09p50070 Brassica napus HOM05D006268 ORTHO05D008118 3.3e-08 63.2 81 44.4
Cpa.g.sc74.89 Carica papaya HOM05D006268 ORTHO05D008118 3.1e-06 56.6 44 61.4


User provided reference genes

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