Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold92G28303 Striga asiatica HOM05D005810 ORTHO05D007279 7.6e-121 437.2 222 100.0
Migut.B01074 Erythranthe guttata HOM05D005810 ORTHO05D007279 2.5e-79 299.3 223 70.4
SalBow8G0563 Salvia bowleyana HOM05D005810 ORTHO05D007279 1.4e-77 293.5 193 75.6
Nitab4.5_0005059g0010 Nicotiana tabacum HOM05D005810 ORTHO05D007279 1.3e-72 276.9 218 65.1
Rhsim05G0160900 Rhododendron simsii HOM05D005810 ORTHO05D007279 2.2e-72 276.2 192 69.3
Nitab4.5_0005729g0060 Nicotiana tabacum HOM05D005810 ORTHO05D007279 8.5e-72 274.2 194 71.6
Solyc01g097600.2 Solanum lycopersicum HOM05D005810 ORTHO05D007279 8.5e-72 274.2 218 65.6
Peaxi162Scf00282g00136 Petunia axillaris HOM05D005810 ORTHO05D007279 1.9e-71 273.1 218 63.8
Cpa.g.sc117.72 Carica papaya HOM05D005810 ORTHO05D007279 4.7e-70 268.5 193 68.9
Oeu060673.3 Olea europaea HOM05D005810 ORTHO05D007279 4.7e-70 268.5 191 70.2
Sopen01g041230 Solanum pennellii HOM05D005810 ORTHO05D007279 1.8e-69 266.5 192 69.3
DCAR_006618 Daucus carota HOM05D005810 ORTHO05D007279 2.3e-69 266.2 192 69.8
COL.COLO4_15299 Corchorus olitorius HOM05D005810 ORTHO05D007279 8.8e-69 264.2 192 66.1
unitig_37.g12634 Utricularia gibba HOM05D005810 ORTHO05D007279 2.6e-68 262.7 192 68.8
vmacro14215 Vaccinium macrocarpon HOM05D005810 ORTHO05D007279 7.5e-68 261.2 192 66.1
THA.LOC104821678 Tarenaya hassleriana HOM05D005810 ORTHO05D007279 1.3e-67 260.4 221 61.5
Thecc.05G287300 Theobroma cacao HOM05D005810 ORTHO05D007279 1.3e-67 260.4 192 66.7
Lsat_1_v5_gn_5_37760 Lactuca sativa HOM05D005810 ORTHO05D007279 2.8e-67 259.2 193 67.4
Duzib177G1000 Durio zibethinus HOM05D005810 ORTHO05D007279 1.1e-66 257.3 192 65.6
Atru.chr2.784 Acer truncatum HOM05D005810 ORTHO05D007279 5.4e-66 255.0 199 66.3
GSVIVG01021833001 Vitis vinifera HOM05D005810 ORTHO05D007279 7.0e-66 254.6 192 66.7
EL10Ac4g09107 Beta vulgaris HOM05D005810 ORTHO05D007279 1.2e-65 253.8 192 63.5
Cc02_g31830 Coffea canephora HOM05D005810 ORTHO05D007279 5.9e-65 251.5 192 65.1
RcHm_v2.0_Chr3g0451831 Rosa chinensis HOM05D005810 ORTHO05D007279 5.9e-65 251.5 192 64.1
Haze_04339 Corylus avellana HOM05D005810 ORTHO05D007279 1.0e-64 250.8 191 63.9
AUR62004921 Chenopodium quinoa HOM05D005810 ORTHO05D007279 1.7e-64 250.0 192 63.5
CANSAT54G2140 Cannabis sativa HOM05D005810 ORTHO05D007279 2.2e-64 249.6 219 62.1
FAN05G0700 Fragaria x ananassa HOM05D005810 ORTHO05D007279 3.8e-64 248.8 190 63.7
FAN14G4259 Fragaria x ananassa HOM05D005810 ORTHO05D007279 3.8e-64 248.8 190 63.7
AT3G04820 Arabidopsis thaliana HOM05D005810 ORTHO05D007279 5.0e-64 248.4 220 57.3
Hund06958 Selenicereus undatus HOM05D005810 ORTHO05D007279 5.0e-64 248.4 193 64.8
AL3G14980 Arabidopsis lyrata HOM05D005810 ORTHO05D007279 6.5e-64 248.1 220 56.4
Cfa006452 Carpinus fangiana HOM05D005810 ORTHO05D007279 6.5e-64 248.1 191 62.8
CSS0013071 Camellia sinensis var. sinensis HOM05D005810 ORTHO05D007279 1.1e-63 247.3 202 61.9
FvH4_6g03330 Fragaria vesca HOM05D005810 ORTHO05D007279 1.1e-63 247.3 190 63.2
ClCG06G009190 Citrullus lanatus HOM05D005810 ORTHO05D007279 1.9e-63 246.5 220 58.6
Potri.005G051400 Populus trichocarpa HOM05D005810 ORTHO05D007279 1.9e-63 246.5 198 62.6
CsaV3_1G045590 Cucumis sativus L. HOM05D005810 ORTHO05D007279 2.5e-63 246.1 219 59.4
Gohir.A11G254200 Gossypium hirsutum HOM05D005810 ORTHO05D007279 2.5e-63 246.1 196 62.8
CiPaw.07G064800 Carya illinoinensis HOM05D005810 ORTHO05D007279 5.5e-63 245.0 191 64.4
Eucgr.B01694 Eucalyptus grandis HOM05D005810 ORTHO05D007279 5.5e-63 245.0 195 63.6
Sc09g0003830 Simmondsia chinensis HOM05D005810 ORTHO05D007279 5.5e-63 245.0 193 62.7
Aqoxy5G00419 Aquilegia oxysepala HOM05D005810 ORTHO05D007279 9.5e-63 244.2 224 58.9
Gohir.D11G264000 Gossypium hirsutum HOM05D005810 ORTHO05D007279 9.5e-63 244.2 196 63.3
Gorai.007G284000 Gossypium raimondii HOM05D005810 ORTHO05D007279 9.5e-63 244.2 196 63.3
Manes.09G154600 Manihot esculenta HOM05D005810 ORTHO05D007279 9.5e-63 244.2 195 63.1
PGR031G1118 Punica granatum HOM05D005810 ORTHO05D007279 9.5e-63 244.2 192 64.1
CSS0027419 Camellia sinensis var. sinensis HOM05D005810 ORTHO05D007279 1.2e-62 243.8 202 61.4
FAN05G1843 Fragaria x ananassa HOM05D005810 ORTHO05D007279 1.6e-62 243.4 190 62.6
Sed0015078 Sechium edule HOM05D005810 ORTHO05D007279 1.0e-61 240.7 222 57.7
FAN02G1150 Fragaria x ananassa HOM05D005810 ORTHO05D007279 1.4e-61 240.4 190 61.6
Ciclev10003382m.g Citrus clementina HOM05D005810 ORTHO05D007279 2.3e-61 239.6 198 62.6
MELO3C024669.2 Cucumis melo HOM05D005810 ORTHO05D007279 5.2e-61 238.4 190 62.6
AUR62001034 Chenopodium quinoa HOM05D005810 ORTHO05D007279 6.8e-61 238.0 192 62.0
MBI11_g10322_MAGBIO Magnolia biondii HOM05D005810 ORTHO05D007279 6.8e-61 238.0 230 56.5
Ca_09411_v3 Cicer arietinum L. HOM05D005810 ORTHO05D007279 1.2e-60 237.3 202 59.9
QL03p024871 Quercus lobata HOM05D005810 ORTHO05D007279 1.2e-60 237.3 191 62.8
CARHR079070 Cardamine hirsuta HOM05D005810 ORTHO05D007279 1.5e-60 236.9 220 55.9
Thhalv10022286m.g Eutrema salsugineum HOM05D005810 ORTHO05D007279 5.7e-60 235.0 223 55.2
Aa31LG5G15210 Aethionema arabicum HOM05D005810 ORTHO05D007279 9.8e-60 234.2 253 50.2
Glyma.03G245900 Glycine max HOM05D005810 ORTHO05D007279 9.8e-60 234.2 194 60.8
Prupe.6G340900 Prunus persica HOM05D005810 ORTHO05D007279 2.8e-59 232.6 220 55.5
Medtr7g114850 Medicago truncatula HOM05D005810 ORTHO05D007279 6.3e-59 231.5 203 59.6
BcaB04g19298 Brassica carinata HOM05D005810 ORTHO05D007279 8.3e-59 231.1 194 60.8
A03p33850 Brassica napus HOM05D005810 ORTHO05D007279 2.4e-58 229.6 195 61.0
BraA03t12559Z Brassica rapa HOM05D005810 ORTHO05D007279 2.4e-58 229.6 195 61.0
Lj7C488G4 Lonicera japonica HOM05D005810 ORTHO05D007279 4.1e-58 228.8 191 62.3
Sp3g03650 Schrenkiella parvula HOM05D005810 ORTHO05D007279 4.1e-58 228.8 217 54.8
arahy.Tifrunner.gnm1.ann1.BBX725 Arachis hypogaea HOM05D005810 ORTHO05D007279 5.4e-58 228.4 199 61.3
arahy.Tifrunner.gnm1.ann1.E80190 Arachis hypogaea HOM05D005810 ORTHO05D007279 5.4e-58 228.4 199 61.3
Lalb_Chr18g0045021 Lupinus albus HOM05D005810 ORTHO05D007279 5.4e-58 228.4 193 62.7
C03p41160 Brassica napus HOM05D005810 ORTHO05D007279 7.0e-58 228.0 195 60.0
ECA232G3974 Erigeron canadensis HOM05D005810 ORTHO05D007279 9.2e-58 227.6 206 57.8
PSO832G3650 Papaver somniferum HOM05D005810 ORTHO05D007279 9.2e-58 227.6 194 61.9
Manes.08G132300 Manihot esculenta HOM05D005810 ORTHO05D007279 1.2e-57 227.3 195 59.0
VMungo0222G0001 Vigna mungo HOM05D005810 ORTHO05D007279 2.0e-57 226.5 194 59.8
MD04G1221700 Malus domestica HOM05D005810 ORTHO05D007279 3.5e-57 225.7 190 60.5
BcaC01g04347 Brassica carinata HOM05D005810 ORTHO05D007279 4.5e-57 225.3 194 59.3
BolC3t16404H Brassica oleracea HOM05D005810 ORTHO05D007279 4.5e-57 225.3 195 60.0
Ah.06g192190 Amaranthus hybridus HOM05D005810 ORTHO05D007279 7.7e-57 224.6 190 61.1
PSO210G1835 Papaver somniferum HOM05D005810 ORTHO05D007279 1.7e-56 223.4 196 60.7
Phvul.006G100200 Phaseolus vulgaris HOM05D005810 ORTHO05D007279 1.7e-56 223.4 194 58.2
Lj1g0027742 Lotus japonicus HOM05D005810 ORTHO05D007279 1.5e-55 220.3 197 59.4
HanXRQChr12g0379621 Helianthus annuus HOM05D005810 ORTHO05D007279 2.5e-55 219.5 191 61.3
MD12G1237800 Malus domestica HOM05D005810 ORTHO05D007279 2.1e-54 216.5 218 52.8
CDE05G3473 Ceratophyllum demersum HOM05D005810 ORTHO05D007279 1.5e-52 210.3 199 57.3
ATR0665G477 Amborella trichopoda HOM05D005810 ORTHO05D007279 7.5e-52 208.0 218 51.8
Psat3g008040 Pisum sativum HOM05D005810 ORTHO05D007279 2.2e-51 206.5 205 56.1
Dinv13659 Davidia involucrata HOM05D005810 ORTHO05D007279 1.4e-50 203.8 192 57.3
HPP92_028013 Vanilla planifolia HOM05D005810 ORTHO05D007279 3.2e-50 202.6 195 53.3
CAN.G134.120 Capsicum annuum HOM05D005810 ORTHO05D007279 7.0e-50 201.4 165 63.6
Glyma.19G243400 Glycine max HOM05D005810 ORTHO05D007279 1.1e-47 194.1 192 53.6
TPR.G21485 Trifolium pratense HOM05D005810 ORTHO05D007279 1.8e-45 186.8 168 58.3
Os05g0509300 Oryza sativa ssp. japonica HOM05D005810 ORTHO05D007279 7.5e-44 181.4 204 47.5
AagrBONN_evm.TU.Sc2ySwM_362.2883 Anthoceros agrestis HOM05D005810 ORTHO05D007279 1.3e-40 170.6 224 43.8
Zm00001eb352870 Zea mays HOM05D005810 ORTHO05D007279 5.0e-40 168.7 201 44.8
Carub.0003s0400 Capsella rubella HOM05D005810 ORTHO05D007279 1.8e-37 160.2 140 55.7
Os01g0773000 Oryza sativa ssp. japonica HOM05D005810 ORTHO05D007279 8.9e-37 157.9 202 43.6
Pp3c18_8560 Physcomitrium patens HOM05D005810 ORTHO05D007279 8.9e-37 157.9 246 39.8
Zm00001eb328420 Zea mays HOM05D005810 ORTHO05D007279 3.4e-36 156.0 191 46.1
Mapoly0092s0013 Marchantia polymorpha HOM05D005810 ORTHO05D007279 9.2e-34 147.9 210 41.9
SMO351G0210 Selaginella moellendorffii HOM05D005810 ORTHO05D007279 2.3e-32 143.3 202 42.6
SMO364G0521 Selaginella moellendorffii HOM05D005810 ORTHO05D007279 3.3e-31 139.4 199 42.2
CBR_g36821 Chara braunii HOM05D005810 ORTHO05D007279 2.1e-22 110.2 298 31.5
MCO09G788 Micromonas commoda HOM05D005810 ORTHO05D007279 7.8e-17 91.7 264 29.5
SHI07786 Sapria himalayana HOM05D005810 ORTHO05D007279 6.9e-13 78.6 67 59.7
TPR.G6991 Trifolium pratense HOM05D005810 ORTHO05D007279 5.8e-12 75.5 48 75.0
PRCOL_00005025 Prasinoderma coloniale HOM05D005810 ORTHO05D007279 3.5e-09 66.2 151 30.5
Lsat_1_v5_gn_5_94521 Lactuca sativa HOM05D000428 ORTHO05D022850 6.2e-06 55.5 72 44.4


User provided reference genes

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