Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold8G04276 Striga asiatica HOM05D000032 ORTHO05D007907 4.4e-127 458.0 233 100.0
Migut.A00802 Erythranthe guttata HOM05D000032 ORTHO05D007907 3.7e-25 119.4 207 39.1
MSTRG.25586 Avicennia marina HOM05D000032 ORTHO05D007907 2.2e-22 110.2 204 37.7
DCAR_000596 Daucus carota HOM05D000402 ORTHO05D007907 8.5e-22 108.2 209 39.2
arahy.Tifrunner.gnm1.ann1.400YCD Arachis hypogaea HOM05D000032 ORTHO05D007907 1.4e-21 107.5 202 37.6
arahy.Tifrunner.gnm1.ann1.GL0HPP Arachis hypogaea HOM05D001862 ORTHO05D007907 2.5e-21 106.7 202 38.1
Cpa.g.sc74.66 Carica papaya HOM05D000032 ORTHO05D007907 2.5e-21 106.7 178 42.1
Nitab4.5_0005648g0040 Nicotiana tabacum HOM05D000032 ORTHO05D007907 5.5e-21 105.5 202 38.1
Lalb_Chr01g0015611 Lupinus albus HOM05D000032 ORTHO05D007907 7.2e-21 105.1 202 37.1
HPP92_027276 Vanilla planifolia HOM05D000032 ORTHO05D007907 9.4e-21 104.8 199 40.7
Haze_08927 Corylus avellana HOM05D000032 ORTHO05D007907 1.2e-20 104.4 212 37.3
Gohir.D08G198200 Gossypium hirsutum HOM05D000032 ORTHO05D007907 1.6e-20 104.0 209 38.3
Glyma.15G265600 Glycine max HOM05D000032 ORTHO05D007907 2.1e-20 103.6 213 38.0
Oeu062746.1 Olea europaea HOM05D000032 ORTHO05D007907 2.1e-20 103.6 203 36.0
QL12p017692 Quercus lobata HOM05D000032 ORTHO05D007907 2.7e-20 103.2 211 37.9
Sopen08g028870 Solanum pennellii HOM05D000032 ORTHO05D007907 2.7e-20 103.2 202 39.1
Thecc.03G273400 Theobroma cacao HOM05D000032 ORTHO05D007907 3.6e-20 102.8 214 37.9
Lj3g0017406 Lotus japonicus HOM05D000032 ORTHO05D007907 4.7e-20 102.4 211 37.9
Nitab4.5_0010472g0050 Nicotiana tabacum HOM05D000032 ORTHO05D007907 4.7e-20 102.4 202 37.6
PGR031G2715 Punica granatum HOM05D000032 ORTHO05D007907 4.7e-20 102.4 215 37.7
Solyc08g080550.1 Solanum lycopersicum HOM05D000032 ORTHO05D007907 4.7e-20 102.4 202 39.1
Ciclev10019528m.g Citrus clementina HOM05D000032 ORTHO05D007907 6.1e-20 102.1 214 38.3
Hund15715 Selenicereus undatus HOM05D000032 ORTHO05D007907 6.1e-20 102.1 211 37.9
Gorai.004G209000 Gossypium raimondii HOM05D000032 ORTHO05D007907 8.0e-20 101.7 209 37.8
Potri.003G123600 Populus trichocarpa HOM05D000032 ORTHO05D007907 8.0e-20 101.7 211 37.0
PGSC0003DMG400003039 Solanum tuberosum HOM05D000032 ORTHO05D007907 8.0e-20 101.7 202 37.6
CAN.G981.7 Capsicum annuum HOM05D000032 ORTHO05D007907 1.0e-19 101.3 202 38.1
ClCG00G000290 Citrullus lanatus HOM05D000032 ORTHO05D007907 1.4e-19 100.9 211 37.4
ClCG10G003550 Citrullus lanatus HOM05D000032 ORTHO05D007907 1.4e-19 100.9 211 37.4
Cfa012122 Carpinus fangiana HOM05D000032 ORTHO05D007907 1.8e-19 100.5 212 36.8
CiPaw.11G139100 Carya illinoinensis HOM05D000032 ORTHO05D007907 1.8e-19 100.5 212 38.2
COL.COLO4_34414 Corchorus olitorius HOM05D000032 ORTHO05D007907 1.8e-19 100.5 214 35.5
Hma1.2p1_0514F.1_g169940 Hydrangea macrophylla HOM05D000032 ORTHO05D007907 1.8e-19 100.5 202 36.1
Hma1.2p1_0514F.1_g169950 Hydrangea macrophylla HOM05D000032 ORTHO05D007907 1.8e-19 100.5 202 36.1
PSO541G2975 Papaver somniferum HOM05D000032 ORTHO05D007907 1.8e-19 100.5 208 36.1
PSO675G3497 Papaver somniferum HOM05D000032 ORTHO05D007907 1.8e-19 100.5 208 36.1
Glyma.08G162000 Glycine max HOM05D000032 ORTHO05D007907 2.3e-19 100.1 211 36.0
VMungo1309G0276 Vigna mungo HOM05D000032 ORTHO05D007907 3.0e-19 99.8 209 37.3
Gohir.A08G179500 Gossypium hirsutum HOM05D000032 ORTHO05D007907 5.2e-19 99.0 211 37.4
Manes.02G025500 Manihot esculenta HOM05D000032 ORTHO05D007907 5.2e-19 99.0 205 37.1
Os02g0636300 Oryza sativa ssp. japonica HOM05D000032 ORTHO05D007907 6.7e-19 98.6 202 35.6
Zm00001eb248240 Zea mays HOM05D000032 ORTHO05D007907 6.7e-19 98.6 202 36.6
Aqoxy7G00973 Aquilegia oxysepala HOM05D000032 ORTHO05D007907 8.8e-19 98.2 209 34.9
TAR627G0378 Trochodendron aralioides HOM05D000032 ORTHO05D007907 8.8e-19 98.2 209 34.9
unitig_21.g20490 Utricularia gibba HOM05D000032 ORTHO05D007907 8.8e-19 98.2 205 38.0
MELO3C014025.2 Cucumis melo HOM05D000032 ORTHO05D007907 1.1e-18 97.8 211 37.0
MBI17_g38209_MAGBIO Magnolia biondii HOM05D000032 ORTHO05D007907 1.1e-18 97.8 209 36.8
Phvul.005G041200 Phaseolus vulgaris HOM05D000032 ORTHO05D007907 1.1e-18 97.8 208 35.1
Phvul.005G045400 Phaseolus vulgaris HOM05D000032 ORTHO05D007907 1.1e-18 97.8 208 35.1
Psat1g016000 Pisum sativum HOM05D000032 ORTHO05D007907 1.5e-18 97.4 207 34.8
Sabra03G0087200 Salix brachista HOM05D000032 ORTHO05D007907 1.5e-18 97.4 216 35.2
CSS0011168 Camellia sinensis var. sinensis HOM05D000032 ORTHO05D007907 2.6e-18 96.7 203 36.9
CSS0012773 Camellia sinensis var. sinensis HOM05D000032 ORTHO05D007907 2.6e-18 96.7 203 36.9
CDE08G0696 Ceratophyllum demersum HOM05D000032 ORTHO05D007907 2.6e-18 96.7 210 34.8
Dinv37671 Davidia involucrata HOM05D000032 ORTHO05D007907 2.6e-18 96.7 199 37.2
Os03g0219700 Oryza sativa ssp. japonica HOM05D000032 ORTHO05D007907 2.6e-18 96.7 202 35.6
Rhsim02G0201600 Rhododendron simsii HOM05D000032 ORTHO05D007907 2.6e-18 96.7 200 37.0
Atru.chr12.1729 Acer truncatum HOM05D000032 ORTHO05D007907 3.3e-18 96.3 212 36.8
CsaV3_3G003560 Cucumis sativus L. HOM05D000032 ORTHO05D007907 3.3e-18 96.3 211 37.0
Medtr2g063080 Medicago truncatula HOM05D000032 ORTHO05D007907 3.3e-18 96.3 207 34.3
vmacro11178 Vaccinium macrocarpon HOM05D000032 ORTHO05D007907 3.3e-18 96.3 200 36.5
SalBow6G4609 Salvia bowleyana HOM05D000032 ORTHO05D007907 4.4e-18 95.9 205 36.1
Sed0012546 Sechium edule HOM05D000032 ORTHO05D007907 4.4e-18 95.9 201 37.3
Peaxi162Scf00714g00034 Petunia axillaris HOM05D000032 ORTHO05D007907 5.7e-18 95.5 204 35.8
Prupe.8G011400 Prunus persica HOM05D000032 ORTHO05D007907 5.7e-18 95.5 214 36.4
Cc08_g14190 Coffea canephora HOM05D000032 ORTHO05D007907 9.7e-18 94.7 204 35.8
HanXRQChr03g0090241 Helianthus annuus HOM05D000032 ORTHO05D007907 9.7e-18 94.7 201 34.3
THA.LOC104809413 Tarenaya hassleriana HOM05D000032 ORTHO05D007907 9.7e-18 94.7 201 37.3
MD10G1007800 Malus domestica HOM05D000032 ORTHO05D007907 1.3e-17 94.4 214 36.0
Sc01g0008630 Simmondsia chinensis HOM05D000032 ORTHO05D007907 1.7e-17 94.0 207 35.7
Ah.02g116460 Amaranthus hybridus HOM05D000032 ORTHO05D007907 2.2e-17 93.6 205 34.6
CANSAT35G0965 Cannabis sativa HOM05D000032 ORTHO05D007907 2.8e-17 93.2 199 35.7
COL.COLO4_08198 Corchorus olitorius HOM05D000032 ORTHO05D007907 3.7e-17 92.8 181 38.7
TPR.G3612 Trifolium pratense HOM05D000032 ORTHO05D007907 4.8e-17 92.4 198 33.8
EL10Ac9g22552 Beta vulgaris HOM05D000032 ORTHO05D007907 8.2e-17 91.7 203 34.5
Lj2P194T32 Lonicera japonica HOM05D000032 ORTHO05D007907 1.1e-16 91.3 202 34.7
Ca_03339_v3 Cicer arietinum L. HOM05D000032 ORTHO05D007907 1.4e-16 90.9 211 34.1
Eucgr.D01908 Eucalyptus grandis HOM05D000032 ORTHO05D007907 1.4e-16 90.9 212 36.8
FAN15G1736 Fragaria x ananassa HOM05D000032 ORTHO05D007907 4.1e-16 89.4 205 34.1
Lj3g0004093 Lotus japonicus HOM05D000032 ORTHO05D007907 4.1e-16 89.4 211 35.1
RcHm_v2.0_Chr6g0278021 Rosa chinensis HOM05D000032 ORTHO05D007907 4.1e-16 89.4 205 33.2
FAN20G1802 Fragaria x ananassa HOM05D000032 ORTHO05D007907 5.3e-16 89.0 205 33.7
TWI81G0901 Tripterygium wilfordii HOM05D000032 ORTHO05D007907 5.3e-16 89.0 209 34.9
CARHR013060 Cardamine hirsuta HOM05D000032 ORTHO05D007907 1.6e-15 87.4 201 34.3
FvH4_2g15280 Fragaria vesca HOM05D000032 ORTHO05D007907 1.6e-15 87.4 205 33.7
FAN24G1340 Fragaria x ananassa HOM05D000032 ORTHO05D007907 1.6e-15 87.4 205 33.7
Thhalv10007276m.g Eutrema salsugineum HOM05D000032 ORTHO05D007907 3.5e-15 86.3 203 33.5
Sp1g11330 Schrenkiella parvula HOM05D000032 ORTHO05D007907 7.7e-15 85.1 203 32.5
ECA233G3945 Erigeron canadensis HOM05D000032 ORTHO05D007907 1.3e-14 84.3 205 32.7
Lsat_1_v5_gn_6_7001 Lactuca sativa HOM05D000032 ORTHO05D007907 2.2e-14 83.6 207 31.9
AL1G24360 Arabidopsis lyrata HOM05D000032 ORTHO05D007907 3.8e-14 82.8 203 32.5
AT1G12770 Arabidopsis thaliana HOM05D000032 ORTHO05D007907 3.8e-14 82.8 203 32.5
BcaB03g13170 Brassica carinata HOM05D000032 ORTHO05D007907 3.8e-14 82.8 203 32.5
A08p32660 Brassica napus HOM05D000032 ORTHO05D007907 3.8e-14 82.8 203 32.5
BraA08t35189Z Brassica rapa HOM05D000032 ORTHO05D007907 3.8e-14 82.8 203 32.5
ATR0618G405 Amborella trichopoda HOM05D000032 ORTHO05D007907 8.5e-14 81.6 195 32.8
Carub.0001s1248 Capsella rubella HOM05D000032 ORTHO05D007907 8.5e-14 81.6 203 32.5
C08p15620 Brassica napus HOM05D000032 ORTHO05D007907 1.5e-13 80.9 203 32.0
BolC8t49189H Brassica oleracea HOM05D000032 ORTHO05D007907 1.9e-13 80.5 203 31.5
AUR62041913 Chenopodium quinoa HOM05D000032 ORTHO05D007907 1.9e-13 80.5 198 31.3
HanXRQChr12g0384461 Helianthus annuus HOM05D000032 ORTHO05D007907 1.9e-13 80.5 176 34.1
Aa31LG1G1970 Aethionema arabicum HOM05D000032 ORTHO05D007907 2.5e-13 80.1 196 30.1
AUR62033909 Chenopodium quinoa HOM05D000032 ORTHO05D007907 5.5e-13 79.0 198 31.3
arahy.Tifrunner.gnm1.ann1.5F49BD Arachis hypogaea HOM05D000032 ORTHO05D007907 8.0e-12 75.1 201 33.8
Actinidia14535 Actinidia chinensis HOM05D000032 ORTHO05D007907 1.0e-11 74.7 204 32.4
Dinv38991 Davidia involucrata HOM05D000032 ORTHO05D007907 2.6e-10 70.1 57 61.4
SEGI_13096 Sequoiadendron giganteum HOM05D000032 ORTHO05D007907 5.7e-10 68.9 180 31.7
TAR624G0787 Trochodendron aralioides HOM05D000250 ORTHO05D007907 7.5e-10 68.6 66 56.1
TAR624G0771 Trochodendron aralioides HOM05D000250 ORTHO05D007907 9.7e-10 68.2 81 49.4
arahy.Tifrunner.gnm1.ann1.N9UBX8 Arachis hypogaea HOM05D000032 ORTHO05D007907 6.3e-09 65.5 65 56.9
Atru.chr2.2825 Acer truncatum HOM05D005725 ORTHO05D007531 8.2e-09 65.1 66 53.0
arahy.Tifrunner.gnm1.ann1.AR860A Arachis hypogaea HOM05D000032 ORTHO05D007907 1.8e-08 63.9 137 34.3
FAN27G3146 Fragaria x ananassa HOM05D000250 ORTHO05D007907 4.1e-08 62.8 57 52.6
Potri.001G102501 Populus trichocarpa HOM05D000250 ORTHO05D007907 4.1e-08 62.8 66 54.5
Nn4g24585 Nelumbo nucifera HOM05D000250 ORTHO05D007907 5.3e-08 62.4 65 50.8
TAR624G1289 Trochodendron aralioides HOM05D000032 ORTHO05D007907 4.5e-07 59.3 57 57.9
AagrBONN_evm.TU.Sc2ySwM_344.3072__3073 Anthoceros agrestis HOM05D000032 ORTHO05D007907 5.0e-06 55.8 204 27.0
Pp3c2_13290 Physcomitrium patens HOM05D000032 ORTHO05D007907 8.5e-06 55.1 71 43.7


User provided reference genes

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