Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold85G26792 Striga asiatica HOM05D007241 ORTHO05D009142 2.3e-210 735.3 379 100.0
MSTRG.5609 Avicennia marina HOM05D007241 ORTHO05D009142 4.8e-115 418.7 365 63.6
Migut.J00242 Erythranthe guttata HOM05D007241 ORTHO05D009142 5.5e-111 405.2 328 65.2
Solyc09g011830.4 Solanum lycopersicum HOM05D007241 ORTHO05D009142 4.5e-105 385.6 343 60.6
Sopen09g006650 Solanum pennellii HOM05D007241 ORTHO05D009142 5.5e-103 378.6 339 60.2
Oeu015010.1 Olea europaea HOM05D007241 ORTHO05D009142 6.1e-102 375.2 323 62.2
PGSC0003DMG400020362 Solanum tuberosum HOM05D007241 ORTHO05D009142 8.8e-101 371.3 340 59.4
GSVIVG01034032001 Vitis vinifera HOM05D007241 ORTHO05D009142 1.9e-100 370.2 332 60.2
Nitab4.5_0007671g0010 Nicotiana tabacum HOM05D007241 ORTHO05D009142 9.7e-100 367.9 342 61.1
SalBow3G1957 Salvia bowleyana HOM05D007241 ORTHO05D009142 8.2e-99 364.8 349 57.9
CSS0004399 Camellia sinensis var. sinensis HOM05D007241 ORTHO05D009142 4.1e-98 362.5 345 58.6
Cc06_g01830 Coffea canephora HOM05D007241 ORTHO05D009142 1.5e-97 360.5 340 59.1
Peaxi162Scf00427g00616 Petunia axillaris HOM05D007241 ORTHO05D009142 1.5e-97 360.5 340 59.7
CAN.G1233.2 Capsicum annuum HOM05D007241 ORTHO05D009142 2.0e-97 360.1 335 59.7
Nitab4.5_0000008g0420 Nicotiana tabacum HOM05D007241 ORTHO05D009142 5.9e-97 358.6 342 59.6
unitig_749.g14176 Utricularia gibba HOM05D007241 ORTHO05D009142 8.5e-96 354.8 316 60.8
Hma1.2p1_0671F.1_g200780 Hydrangea macrophylla HOM05D007241 ORTHO05D009142 2.5e-95 353.2 327 59.3
Haze_20925 Corylus avellana HOM05D007241 ORTHO05D009142 9.4e-95 351.3 346 57.5
Thecc.05G024800 Theobroma cacao HOM05D007241 ORTHO05D009142 7.4e-92 341.7 344 56.7
CiPaw.10G153200 Carya illinoinensis HOM05D007241 ORTHO05D009142 9.7e-92 341.3 341 56.6
Cpa.g.sc56.88 Carica papaya HOM05D007241 ORTHO05D009142 1.3e-91 340.9 344 54.9
Dinv35525 Davidia involucrata HOM05D007241 ORTHO05D009142 6.3e-91 338.6 324 59.6
PGR004G2498 Punica granatum HOM05D007241 ORTHO05D009142 1.4e-90 337.4 337 54.6
TAR633G0637 Trochodendron aralioides HOM05D007241 ORTHO05D009142 4.1e-90 335.9 345 55.1
Ah.07g207300 Amaranthus hybridus HOM05D007241 ORTHO05D009142 9.1e-90 334.7 339 56.3
Nn2g11326 Nelumbo nucifera HOM05D007241 ORTHO05D009142 9.1e-90 334.7 343 55.1
AUR62015997 Chenopodium quinoa HOM05D007241 ORTHO05D009142 4.5e-89 332.4 329 57.1
Gorai.012G110300 Gossypium raimondii HOM05D007241 ORTHO05D009142 5.9e-89 332.0 355 54.6
Gohir.D04G127300 Gossypium hirsutum HOM05D007241 ORTHO05D009142 1.0e-88 331.3 361 54.0
Atru.chr8.2123 Acer truncatum HOM05D007241 ORTHO05D009142 1.3e-88 330.9 328 53.4
Ciclev10012141m.g Citrus clementina HOM05D007241 ORTHO05D009142 1.3e-88 330.9 341 55.4
Duzib106G0374 Durio zibethinus HOM05D007241 ORTHO05D009142 2.9e-88 329.7 343 53.6
Prupe.6G268100 Prunus persica HOM05D007241 ORTHO05D009142 8.5e-88 328.2 332 53.3
Duzib093G2007 Durio zibethinus HOM05D007241 ORTHO05D009142 4.2e-87 325.9 346 54.6
THA.LOC104823276 Tarenaya hassleriana HOM05D007241 ORTHO05D009142 9.4e-87 324.7 345 52.5
Sc22g0004510 Simmondsia chinensis HOM05D007241 ORTHO05D009142 2.1e-86 323.6 319 57.4
MBI14_g28606_MAGBIO Magnolia biondii HOM05D007241 ORTHO05D009142 1.0e-85 321.2 328 55.2
Sp3g07590 Schrenkiella parvula HOM05D007241 ORTHO05D009142 1.4e-85 320.9 294 57.5
CANSAT35G2041 Cannabis sativa HOM05D007241 ORTHO05D009142 2.3e-85 320.1 322 54.0
CARHR083550 Cardamine hirsuta HOM05D007241 ORTHO05D009142 5.2e-85 318.9 341 52.8
Eucgr.K03006 Eucalyptus grandis HOM05D007241 ORTHO05D009142 6.7e-85 318.5 291 58.4
Lj3g0002129 Lotus japonicus HOM05D007241 ORTHO05D009142 6.7e-85 318.5 326 54.9
Aqoxy1G00764 Aquilegia oxysepala HOM05D007241 ORTHO05D009142 1.5e-84 317.4 339 53.1
Thhalv10021091m.g Eutrema salsugineum HOM05D007241 ORTHO05D009142 2.0e-84 317.0 342 53.2
BcaC09g48011 Brassica carinata HOM05D007241 ORTHO05D009142 2.6e-84 316.6 339 52.5
EL10Ac3g05675 Beta vulgaris HOM05D007241 ORTHO05D009142 3.3e-84 316.2 277 61.4
Lalb_Chr13g0291331 Lupinus albus HOM05D007241 ORTHO05D009142 4.4e-84 315.8 337 53.1
Carub.0003s0832 Capsella rubella HOM05D007241 ORTHO05D009142 1.3e-83 314.3 331 52.9
Potri.006G094800 Populus trichocarpa HOM05D007241 ORTHO05D009142 1.7e-83 313.9 342 52.6
FAN02G0490 Fragaria x ananassa HOM05D007241 ORTHO05D009142 2.8e-83 313.2 332 51.5
Aa31LG3G1690 Aethionema arabicum HOM05D007241 ORTHO05D009142 4.8e-83 312.4 346 52.3
Sed0022131 Sechium edule HOM05D007241 ORTHO05D009142 6.3e-83 312.0 327 51.4
Sabra06G0072600 Salix brachista HOM05D007241 ORTHO05D009142 8.2e-83 311.6 342 52.6
AL3G20320 Arabidopsis lyrata HOM05D007241 ORTHO05D009142 1.8e-82 310.5 343 51.6
BcaC09g48056 Brassica carinata HOM05D007241 ORTHO05D009142 2.4e-82 310.1 340 51.8
MELO3C003216.2 Cucumis melo HOM05D007241 ORTHO05D009142 3.1e-82 309.7 333 51.4
CsaV3_4G025900 Cucumis sativus L. HOM05D007241 ORTHO05D009142 9.1e-82 308.1 330 50.0
FvH4_6g12350 Fragaria vesca HOM05D007241 ORTHO05D009142 9.1e-82 308.1 327 51.1
FAN14G0673 Fragaria x ananassa HOM05D007241 ORTHO05D009142 9.1e-82 308.1 327 51.1
FAN05G2185 Fragaria x ananassa HOM05D007241 ORTHO05D009142 1.2e-81 307.8 332 50.9
ClCG04G007350 Citrullus lanatus HOM05D007241 ORTHO05D009142 2.0e-81 307.0 339 49.6
Manes.08G083700 Manihot esculenta HOM05D007241 ORTHO05D009142 2.0e-81 307.0 344 53.8
Psat7g241800 Pisum sativum HOM05D007241 ORTHO05D009142 2.6e-81 306.6 345 52.2
Glyma.01G109100 Glycine max HOM05D007241 ORTHO05D009142 3.5e-81 306.2 353 52.4
AT3G09210 Arabidopsis thaliana HOM05D007241 ORTHO05D009142 4.5e-81 305.8 339 51.0
BraA01t04312Z Brassica rapa HOM05D007241 ORTHO05D009142 4.5e-81 305.8 340 50.9
DCAR_010398 Daucus carota HOM05D007241 ORTHO05D009142 1.3e-80 304.3 381 47.8
BolC1t05471H Brassica oleracea HOM05D007241 ORTHO05D009142 2.9e-80 303.1 340 50.9
Hund04733 Selenicereus undatus HOM05D007241 ORTHO05D009142 5.0e-80 302.4 341 52.5
Lsat_1_v5_gn_2_72881 Lactuca sativa HOM05D007241 ORTHO05D009142 8.5e-80 301.6 320 51.9
Gohir.A04G087000 Gossypium hirsutum HOM05D007241 ORTHO05D009142 1.5e-79 300.8 348 52.3
Phvul.010G006200 Phaseolus vulgaris HOM05D007241 ORTHO05D009142 2.5e-79 300.1 342 50.6
RcHm_v2.0_Chr3g0464151 Rosa chinensis HOM05D007241 ORTHO05D009142 9.4e-79 298.1 338 50.6
vmacro20223 Vaccinium macrocarpon HOM05D007241 ORTHO05D009142 6.1e-78 295.4 345 48.1
HanXRQChr10g0300011 Helianthus annuus HOM05D007241 ORTHO05D009142 1.8e-77 293.9 290 53.8
Actinidia13799 Actinidia chinensis HOM05D007241 ORTHO05D009142 4.0e-77 292.7 308 52.6
Medtr4g019060 Medicago truncatula HOM05D007241 ORTHO05D009142 4.0e-77 292.7 323 54.2
VMungo0331G1333 Vigna mungo HOM05D007241 ORTHO05D009142 8.8e-77 291.6 342 49.4
arahy.Tifrunner.gnm1.ann1.IV4I8P Arachis hypogaea HOM05D007241 ORTHO05D009142 3.3e-76 289.7 288 53.8
MD04G1143600 Malus domestica HOM05D007241 ORTHO05D009142 7.5e-76 288.5 304 52.3
TWI74G0988 Tripterygium wilfordii HOM05D007241 ORTHO05D009142 1.3e-75 287.7 350 48.3
ECA233G2042 Erigeron canadensis HOM05D007241 ORTHO05D009142 4.8e-75 285.8 272 54.4
PSO063G4791 Papaver somniferum HOM05D007241 ORTHO05D009142 1.9e-71 273.9 292 51.4
Ca_20114_v3 Cicer arietinum L. HOM05D007241 ORTHO05D009142 5.5e-71 272.3 387 44.4
ATR0618G224 Amborella trichopoda HOM05D007241 ORTHO05D009142 2.0e-68 263.8 283 50.9
Rhsim05G0202600 Rhododendron simsii HOM05D007241 ORTHO05D009142 2.6e-68 263.5 337 46.3
arahy.Tifrunner.gnm1.ann1.D4R6TJ Arachis hypogaea HOM05D007241 ORTHO05D009142 6.3e-67 258.8 333 45.9
AUR62021204 Chenopodium quinoa HOM05D007241 ORTHO05D009142 5.0e-56 222.6 329 46.8
Os03g0825500 Oryza sativa ssp. japonica HOM05D007241 ORTHO05D009142 6.6e-56 222.2 322 41.9
HPP92_014289 Vanilla planifolia HOM05D007241 ORTHO05D009142 3.2e-50 203.4 229 47.6
Zm00001eb063100 Zea mays HOM05D007241 ORTHO05D009142 2.3e-48 197.2 289 40.1
TPR.G8187 Trifolium pratense HOM05D007241 ORTHO05D009142 5.0e-48 196.1 280 45.0
arahy.Tifrunner.gnm1.ann1.4L01Q9 Arachis hypogaea HOM05D007241 ORTHO05D009142 8.9e-45 185.3 201 50.2
CDE04G1578 Ceratophyllum demersum HOM05D007241 ORTHO05D009142 4.4e-44 183.0 217 47.9
COL.COLO4_14646 Corchorus olitorius HOM05D007241 ORTHO05D009142 1.7e-35 154.5 142 58.5
Mapoly0003s0142 Marchantia polymorpha HOM05D007241 ORTHO05D009142 1.6e-30 137.9 274 33.2
TPR.G40038 Trifolium pratense HOM05D007241 ORTHO05D009142 3.6e-30 136.7 96 68.8
MD12G1157800 Malus domestica HOM05D007241 ORTHO05D009142 6.2e-30 136.0 246 38.6
Lj3A958T74 Lonicera japonica HOM05D007241 ORTHO05D009142 1.1e-23 115.2 133 54.9
Lj3A958T75 Lonicera japonica HOM05D007241 ORTHO05D009142 1.2e-22 111.7 101 58.4
Pp3c24_19950 Physcomitrium patens HOM05D007241 ORTHO05D009142 1.6e-22 111.3 271 29.2
CBR_g25746 Chara braunii HOM05D000019 ORTHO05D000048 1.1e-21 108.6 283 26.1
BcaB05g24622 Brassica carinata HOM05D007241 ORTHO05D009142 2.3e-16 90.9 87 50.6
COL.COLO4_14645 Corchorus olitorius HOM05D007241 ORTHO05D009142 1.1e-15 88.6 131 48.1
SMO164G0023 Selaginella moellendorffii HOM05D007241 ORTHO05D009142 2.9e-11 73.9 315 26.7
SEGI_13087 Sequoiadendron giganteum HOM05D007241 ORTHO05D009142 1.0e-08 65.5 80 41.2
TAR629G1375 Trochodendron aralioides HOM05D007241 ORTHO05D009142 6.2e-06 56.2 51 52.9


User provided reference genes

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