Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold83G26271 Striga asiatica HOM05D003620 ORTHO05D004261 2.6e-231 805.1 409 100.0
MSTRG.16561 Avicennia marina HOM05D003620 ORTHO05D004261 1.3e-187 659.8 410 82.4
Oeu037206.2 Olea europaea HOM05D003620 ORTHO05D004261 4.9e-166 588.2 417 74.8
Actinidia00242 Actinidia chinensis HOM05D003620 ORTHO05D004261 1.6e-164 583.2 410 72.7
SalBow5G2235 Salvia bowleyana HOM05D003620 ORTHO05D004261 1.9e-162 576.2 472 66.1
Cc02_g21930 Coffea canephora HOM05D003620 ORTHO05D004261 2.8e-161 572.4 417 70.5
Actinidia38967 Actinidia chinensis HOM05D003620 ORTHO05D004261 1.4e-160 570.1 410 71.2
Nitab4.5_0008610g0050 Nicotiana tabacum HOM05D003620 ORTHO05D004261 2.4e-160 569.3 412 70.4
Nitab4.5_0007987g0020 Nicotiana tabacum HOM05D003620 ORTHO05D004261 2.0e-159 566.2 412 70.1
CSS0011415 Camellia sinensis var. sinensis HOM05D003620 ORTHO05D004261 4.5e-159 565.1 413 72.2
Potri.003G061700 Populus trichocarpa HOM05D003620 ORTHO05D004261 3.8e-158 562.0 424 68.9
Peaxi162Scf00001g00523 Petunia axillaris HOM05D003620 ORTHO05D004261 5.4e-157 558.1 413 69.2
Thecc.02G144000 Theobroma cacao HOM05D003620 ORTHO05D004261 1.2e-156 557.0 411 70.3
Manes.10G117200 Manihot esculenta HOM05D003620 ORTHO05D004261 2.7e-156 555.8 416 70.4
Nn1g06259 Nelumbo nucifera HOM05D003620 ORTHO05D004261 3.5e-156 555.4 411 70.8
CAN.G523.97 Capsicum annuum HOM05D003620 ORTHO05D004261 6.0e-156 554.7 407 67.8
Duzib132G0147 Durio zibethinus HOM05D003620 ORTHO05D004261 7.9e-156 554.3 415 69.2
TWI14G0354 Tripterygium wilfordii HOM05D003620 ORTHO05D004261 7.9e-156 554.3 410 69.0
Cfa005564 Carpinus fangiana HOM05D003620 ORTHO05D004261 2.5e-154 549.3 408 69.4
Atru.chr6.881 Acer truncatum HOM05D003620 ORTHO05D004261 3.3e-154 548.9 407 69.8
CSS0027167 Camellia sinensis var. sinensis HOM05D003620 ORTHO05D004261 5.6e-154 548.1 376 72.6
Potri.001G172400 Populus trichocarpa HOM05D003620 ORTHO05D004261 2.8e-153 545.8 414 69.1
Glyma.15G051100 Glycine max HOM05D003620 ORTHO05D004261 6.2e-153 544.7 407 68.6
Gorai.008G014600 Gossypium raimondii HOM05D003620 ORTHO05D004261 5.3e-152 541.6 409 67.5
Glyma.08G181200 Glycine max HOM05D003620 ORTHO05D004261 2.6e-151 539.3 407 67.8
Solyc01g104880.3 Solanum lycopersicum HOM05D003620 ORTHO05D004261 2.6e-151 539.3 409 67.0
MD08G1222700 Malus domestica HOM05D003620 ORTHO05D004261 4.5e-151 538.5 412 68.2
Sopen01g047400 Solanum pennellii HOM05D003620 ORTHO05D004261 4.5e-151 538.5 409 66.7
TAR625G1066 Trochodendron aralioides HOM05D003620 ORTHO05D004261 5.8e-151 538.1 414 67.6
Gohir.D12G014500 Gossypium hirsutum HOM05D003620 ORTHO05D004261 1.3e-150 537.0 409 67.0
Prupe.1G560600 Prunus persica HOM05D003620 ORTHO05D004261 1.7e-150 536.6 409 68.5
TPR.G19731 Trifolium pratense HOM05D003620 ORTHO05D004261 1.7e-150 536.6 410 67.1
Psat1g218440 Pisum sativum HOM05D003620 ORTHO05D004261 1.9e-149 533.1 408 66.4
Lj6g0005534 Lotus japonicus HOM05D003620 ORTHO05D004261 3.2e-149 532.3 412 67.0
VMungo0540G0770 Vigna mungo HOM05D003620 ORTHO05D004261 3.2e-149 532.3 407 67.3
Lsat_1_v5_gn_9_117920 Lactuca sativa HOM05D003620 ORTHO05D004261 4.2e-149 531.9 371 73.0
Sed0005951 Sechium edule HOM05D003620 ORTHO05D004261 7.1e-149 531.2 416 67.3
Ca_00113_v3 Cicer arietinum L. HOM05D003620 ORTHO05D004261 9.3e-149 530.8 407 66.3
CiPaw.05G039200 Carya illinoinensis HOM05D003620 ORTHO05D004261 2.1e-148 529.6 408 66.9
COL.COLO4_20874 Corchorus olitorius HOM05D003620 ORTHO05D004261 7.9e-148 527.7 411 65.9
Phvul.006G208800 Phaseolus vulgaris HOM05D003620 ORTHO05D004261 7.9e-148 527.7 407 66.6
HanXRQChr11g0337651 Helianthus annuus HOM05D003620 ORTHO05D004261 1.0e-147 527.3 407 65.6
MELO3C018674.2 Cucumis melo HOM05D003620 ORTHO05D004261 1.8e-147 526.6 395 69.1
CsaV3_7G006180 Cucumis sativus L. HOM05D003620 ORTHO05D004261 1.8e-147 526.6 415 66.7
Ciclev10000710m.g Citrus clementina HOM05D003620 ORTHO05D004261 8.7e-147 524.2 443 63.0
THA.LOC104817775 Tarenaya hassleriana HOM05D003620 ORTHO05D004261 1.1e-146 523.9 401 67.6
Eucgr.G00656 Eucalyptus grandis HOM05D003620 ORTHO05D004261 1.6e-145 520.0 385 69.6
CANSAT11G1106 Cannabis sativa HOM05D003620 ORTHO05D004261 4.8e-145 518.5 380 69.5
PGR042G1212 Punica granatum HOM05D003620 ORTHO05D004261 8.2e-145 517.7 408 66.4
ECA236G2397 Erigeron canadensis HOM05D003620 ORTHO05D004261 1.8e-144 516.5 407 65.4
QL02p098754 Quercus lobata HOM05D003620 ORTHO05D004261 1.8e-144 516.5 416 66.3
ECA240G1941 Erigeron canadensis HOM05D003620 ORTHO05D004261 2.4e-144 516.2 415 64.3
Medtr2g008190 Medicago truncatula HOM05D003620 ORTHO05D004261 4.0e-144 515.4 431 62.9
THA.LOC104811774 Tarenaya hassleriana HOM05D003620 ORTHO05D004261 9.0e-144 514.2 375 69.9
Sabra01G0139300 Salix brachista HOM05D003620 ORTHO05D004261 2.6e-143 512.7 459 61.7
Aqoxy6G00354 Aquilegia oxysepala HOM05D003620 ORTHO05D004261 3.4e-143 512.3 412 64.8
FAN04G1518 Fragaria x ananassa HOM05D003620 ORTHO05D004261 3.4e-143 512.3 361 73.7
FvH4_5g30530 Fragaria vesca HOM05D003620 ORTHO05D004261 5.8e-143 511.5 362 73.5
FAN18G1779 Fragaria x ananassa HOM05D003620 ORTHO05D004261 5.8e-143 511.5 362 73.5
Lalb_Chr18g0060681 Lupinus albus HOM05D003620 ORTHO05D004261 7.6e-143 511.1 377 69.0
Sc09g0004430 Simmondsia chinensis HOM05D003620 ORTHO05D004261 7.6e-143 511.1 413 64.4
Manes.07G024800 Manihot esculenta HOM05D003620 ORTHO05D004261 1.3e-142 510.4 371 70.6
FAN13G1243 Fragaria x ananassa HOM05D003620 ORTHO05D004261 2.9e-142 509.2 363 73.3
A10p14580 Brassica napus HOM05D003620 ORTHO05D004261 8.4e-142 507.7 401 64.6
A01p17230 Brassica napus HOM05D003620 ORTHO05D004261 1.9e-141 506.5 396 65.4
FAN08G3618 Fragaria x ananassa HOM05D003620 ORTHO05D004261 1.9e-141 506.5 362 73.5
BcaC09g50725 Brassica carinata HOM05D003620 ORTHO05D004261 2.5e-141 506.1 396 65.4
C01p21590 Brassica napus HOM05D003620 ORTHO05D004261 2.5e-141 506.1 396 65.4
BolC1t02078H Brassica oleracea HOM05D003620 ORTHO05D004261 2.5e-141 506.1 396 65.4
CANSAT11G0919 Cannabis sativa HOM05D003620 ORTHO05D004261 2.5e-141 506.1 380 68.4
RcHm_v2.0_Chr7g0225351 Rosa chinensis HOM05D003620 ORTHO05D004261 3.2e-141 505.8 361 71.7
BraA01t01679Z Brassica rapa HOM05D003620 ORTHO05D004261 7.1e-141 504.6 396 65.2
BraA10t43545Z Brassica rapa HOM05D003620 ORTHO05D004261 9.3e-141 504.2 401 63.8
Aa31LG3G330 Aethionema arabicum HOM05D003620 ORTHO05D004261 1.2e-140 503.8 396 63.9
Thhalv10024661m.g Eutrema salsugineum HOM05D003620 ORTHO05D004261 2.1e-140 503.1 396 64.9
AT5G57190 Arabidopsis thaliana HOM05D003620 ORTHO05D004261 2.7e-140 502.7 396 64.6
BcaC04g19991 Brassica carinata HOM05D003620 ORTHO05D004261 2.7e-140 502.7 401 63.6
C09p49020 Brassica napus HOM05D003620 ORTHO05D004261 2.7e-140 502.7 401 63.6
BolC9t57753H Brassica oleracea HOM05D003620 ORTHO05D004261 2.7e-140 502.7 401 63.6
BcaB08g36077 Brassica carinata HOM05D003620 ORTHO05D004261 4.6e-140 501.9 410 63.2
CARHR233480 Cardamine hirsuta HOM05D003620 ORTHO05D004261 4.6e-140 501.9 396 64.1
CARHR270980 Cardamine hirsuta HOM05D003620 ORTHO05D004261 1.0e-139 500.7 394 64.5
Gohir.A12G013800 Gossypium hirsutum HOM05D003620 ORTHO05D004261 2.3e-139 499.6 337 72.7
Sp6g18920 Schrenkiella parvula HOM05D003620 ORTHO05D004261 3.0e-139 499.2 397 64.5
Lsat_1_v5_gn_7_80501 Lactuca sativa HOM05D003620 ORTHO05D004261 3.9e-139 498.8 384 66.4
Carub.0007s1498 Capsella rubella HOM05D003620 ORTHO05D004261 1.5e-138 496.9 396 63.4
BcaNung03773 Brassica carinata HOM05D003620 ORTHO05D004261 5.7e-138 495.0 396 63.9
Carub.0008s1770 Capsella rubella HOM05D003620 ORTHO05D004261 9.7e-138 494.2 399 64.7
Thhalv10012950m.g Eutrema salsugineum HOM05D003620 ORTHO05D004261 2.8e-137 492.7 370 67.3
AL7G27030 Arabidopsis lyrata HOM05D003620 ORTHO05D004261 3.1e-136 489.2 396 62.9
AT4G25970 Arabidopsis thaliana HOM05D003620 ORTHO05D004261 1.2e-135 487.3 396 63.4
HanXRQChr03g0065791 Helianthus annuus HOM05D003620 ORTHO05D004261 2.0e-135 486.5 379 66.8
ATR1136G049 Amborella trichopoda HOM05D003620 ORTHO05D004261 5.9e-135 485.0 376 64.9
ClCG09G013430 Citrullus lanatus HOM05D003620 ORTHO05D004261 5.0e-134 481.9 397 65.5
AUR62004784 Chenopodium quinoa HOM05D003620 ORTHO05D004261 2.7e-132 476.1 407 61.7
PSO675G2802 Papaver somniferum HOM05D003620 ORTHO05D004261 5.1e-131 471.9 418 59.6
PSO541G1613 Papaver somniferum HOM05D003620 ORTHO05D004261 8.8e-131 471.1 418 59.3
AL8G33150 Arabidopsis lyrata HOM05D003620 ORTHO05D004261 1.1e-130 470.7 412 61.4
Zm00001eb362570 Zea mays HOM05D003620 ORTHO05D004261 1.5e-130 470.3 407 59.2
CDE08G1148 Ceratophyllum demersum HOM05D003620 ORTHO05D004261 6.9e-128 461.5 408 60.0
EL10Ac4g08941 Beta vulgaris HOM05D003620 ORTHO05D004261 5.9e-127 458.4 407 61.2
MBI06_g29671_MAGBIO Magnolia biondii HOM05D003620 ORTHO05D004261 1.2e-124 450.7 366 63.7
HPP92_019398 Vanilla planifolia HOM05D003620 ORTHO05D004261 1.6e-124 450.3 408 59.1
Sabra03G0035800 Salix brachista HOM05D003620 ORTHO05D004261 1.0e-123 447.6 367 63.5
Peaxi162Scf00152g01227 Petunia axillaris HOM05D003620 ORTHO05D004261 6.3e-121 438.3 358 61.7
GSVIVG01029733001 Vitis vinifera HOM05D003620 ORTHO05D004261 2.0e-119 433.3 281 75.4
Rhsim11G0134200 Rhododendron simsii HOM05D003620 ORTHO05D004261 1.5e-117 427.2 430 56.7
Lj5C243G7 Lonicera japonica HOM05D003620 ORTHO05D004261 4.4e-114 415.6 394 58.1
Mapoly0064s0044 Marchantia polymorpha HOM05D003620 ORTHO05D004261 4.0e-107 392.5 376 54.0
AagrBONN_evm.TU.Sc2ySwM_228.3970 Anthoceros agrestis HOM05D003620 ORTHO05D004261 2.0e-106 390.2 399 51.6
Pp3c15_7420 Physcomitrium patens HOM05D003620 ORTHO05D004261 7.2e-101 371.7 370 53.2
Migut.B00643 Erythranthe guttata HOM05D003620 ORTHO05D004261 1.0e-99 367.9 226 82.7
Dinv24230 Davidia involucrata HOM05D003620 ORTHO05D004261 1.1e-96 357.8 251 73.3
SMO244G0007 Selaginella moellendorffii HOM05D003620 ORTHO05D004261 2.8e-89 333.2 359 48.7
Oeu047370.1 Olea europaea HOM05D003620 ORTHO05D004261 1.7e-81 307.4 263 66.9
DCAR_001444 Daucus carota HOM05D003620 ORTHO05D004261 1.4e-80 304.3 321 54.5
Lj6g0009012 Lotus japonicus HOM05D003620 ORTHO05D004261 9.5e-77 291.6 283 56.5
Sp7g23980 Schrenkiella parvula HOM05D003620 ORTHO05D004261 9.5e-69 265.0 245 59.2
Os01g0959800 Oryza sativa ssp. japonica HOM05D003620 ORTHO05D004261 3.0e-62 243.4 159 73.0
Oeu047369.1 Olea europaea HOM05D003620 ORTHO05D004261 4.7e-60 236.1 131 89.3
SalBow5G0451 Salvia bowleyana HOM05D003620 ORTHO05D004261 8.1e-60 235.3 130 88.5
AL161U10010 Arabidopsis lyrata HOM05D003620 ORTHO05D004261 5.2e-59 232.6 397 39.5
Zm00001eb011090 Zea mays HOM05D003620 ORTHO05D004261 1.2e-58 231.5 153 72.5
Haze_10770 Corylus avellana HOM05D003620 ORTHO05D004261 4.4e-58 229.6 142 76.1
Gohir.A12G013866 Gossypium hirsutum HOM05D003620 ORTHO05D004261 1.6e-55 221.1 203 59.1
Migut.B00642 Erythranthe guttata HOM05D003620 ORTHO05D004261 3.3e-53 213.4 151 73.5
AUR62003395 Chenopodium quinoa HOM05D003620 ORTHO05D004261 1.1e-51 208.4 196 54.6
CBR_g4360 Chara braunii HOM05D003620 ORTHO05D004261 2.1e-44 184.1 256 41.8
Haze_10769 Corylus avellana HOM05D003620 ORTHO05D004261 3.1e-43 180.3 112 76.8
Glyma.03G071101 Glycine max HOM05D003620 ORTHO05D004261 4.9e-41 172.9 115 77.4
Zm00001eb141090 Zea mays HOM05D003620 ORTHO05D004261 8.4e-41 172.2 122 68.9
vmacro01806 Vaccinium macrocarpon HOM05D003620 ORTHO05D004261 3.4e-34 150.2 98 75.5
Dinv24229 Davidia involucrata HOM05D003620 ORTHO05D004261 8.7e-30 135.6 102 67.6
arahy.Tifrunner.gnm1.ann1.4105RR Arachis hypogaea HOM05D003620 ORTHO05D004261 4.8e-28 129.8 160 48.8
arahy.Tifrunner.gnm1.ann1.XM8XEN Arachis hypogaea HOM05D003620 ORTHO05D004261 8.2e-28 129.0 162 48.1
MELO3C003259.2 Cucumis melo HOM05D003620 ORTHO05D004261 7.6e-26 122.5 81 72.8
GSVIVG01029735001 Vitis vinifera HOM05D003620 ORTHO05D004261 5.7e-21 106.3 128 50.0
Haze_10767 Corylus avellana HOM05D003620 ORTHO05D004261 9.7e-21 105.5 101 59.4
Haze_10763 Corylus avellana HOM05D003620 ORTHO05D004261 1.3e-20 105.1 101 59.4
BolC7t41195H Brassica oleracea HOM05D003620 ORTHO05D004261 1.2e-18 98.6 113 47.8
QL08p057600 Quercus lobata HOM05D003620 ORTHO05D004261 3.2e-16 90.5 100 55.0
HanXRQChr04g0126841 Helianthus annuus HOM05D003620 ORTHO05D004261 1.8e-14 84.7 58 65.5
Cpa.g.sc2.53 Carica papaya HOM05D003620 ORTHO05D004261 3.0e-14 84.0 102 52.9
BcaC07g37664 Brassica carinata HOM05D003620 ORTHO05D004261 1.4e-11 75.1 64 59.4
SEGI_17560 Sequoiadendron giganteum HOM05D003620 ORTHO05D004261 2.5e-08 64.3 44 63.6
Medtr7g104390 Medicago truncatula HOM05D003620 ORTHO05D004261 4.7e-07 60.1 48 58.3
C09p20230 Brassica napus HOM05D003620 ORTHO05D004261 3.0e-06 57.4 37 67.6
C07p07750 Brassica napus HOM05D003620 ORTHO05D004261 3.9e-06 57.0 37 67.6
Medtr5g009630 Medicago truncatula HOM05D004543 ORTHO05D004261 8.8e-06 55.8 46 56.5


User provided reference genes

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