Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold81G26053 Striga asiatica HOM05D001195 ORTHO05D001138 2.7e-149 531.9 267 100.0
SGA_v2.0_scaffold100G29556 Striga asiatica HOM05D001195 ORTHO05D001138 2.0e-139 499.2 282 90.8
Migut.N00869 Erythranthe guttata HOM05D001195 ORTHO05D001138 3.0e-63 246.1 250 56.0
Oeu010606.1 Olea europaea HOM05D001195 ORTHO05D001138 2.8e-61 239.6 253 52.2
MSTRG.20342 Avicennia marina HOM05D001195 ORTHO05D001138 2.0e-59 233.4 298 49.0
MSTRG.5186 Avicennia marina HOM05D001195 ORTHO05D001138 1.2e-56 224.2 300 47.7
Oeu043597.1 Olea europaea HOM05D001195 ORTHO05D001138 1.3e-53 214.2 265 50.9
CSS0023410 Camellia sinensis var. sinensis HOM05D001195 ORTHO05D001138 1.6e-53 213.8 299 43.5
vmacro01625 Vaccinium macrocarpon HOM05D001195 ORTHO05D001138 1.6e-53 213.8 259 49.0
Rhsim11G0115200 Rhododendron simsii HOM05D001195 ORTHO05D001138 9.0e-52 208.0 286 46.2
Solyc01g102810.3 Solanum lycopersicum HOM05D001195 ORTHO05D001138 7.6e-51 204.9 297 42.1
ClCG10G007550 Citrullus lanatus HOM05D001195 ORTHO05D001138 1.3e-50 204.1 300 42.0
CAN.G1379.9 Capsicum annuum HOM05D001195 ORTHO05D001138 1.7e-50 203.8 294 42.2
Sopen01g045210 Solanum pennellii HOM05D001195 ORTHO05D001138 2.9e-50 203.0 290 42.4
PGSC0003DMG400018259 Solanum tuberosum HOM05D001195 ORTHO05D001138 2.9e-50 203.0 315 40.0
GSVIVG01023130001 Vitis vinifera HOM05D001195 ORTHO05D001138 8.4e-50 201.4 264 44.7
Hma1.2p1_0157F.1_g069180 Hydrangea macrophylla HOM05D001195 ORTHO05D001138 1.4e-49 200.7 277 44.8
Nitab4.5_0006159g0040 Nicotiana tabacum HOM05D001195 ORTHO05D001138 2.5e-49 199.9 302 42.4
TPR.G5938 Trifolium pratense HOM05D001195 ORTHO05D001138 3.2e-49 199.5 267 46.1
CANSAT01G3051 Cannabis sativa HOM05D001195 ORTHO05D001138 9.3e-49 198.0 266 47.0
Sed0006113 Sechium edule HOM05D001195 ORTHO05D001138 9.3e-49 198.0 297 42.1
Medtr4g134530 Medicago truncatula HOM05D001195 ORTHO05D001138 1.2e-48 197.6 289 44.6
Nitab4.5_0001085g0120 Nicotiana tabacum HOM05D001195 ORTHO05D001138 1.2e-48 197.6 294 42.5
Cc02_g23760 Coffea canephora HOM05D001195 ORTHO05D001138 1.6e-48 197.2 294 44.6
Lj4g0024332 Lotus japonicus HOM05D001195 ORTHO05D001138 2.1e-48 196.8 292 42.8
Sc07g0003280 Simmondsia chinensis HOM05D001195 ORTHO05D001138 3.5e-48 196.1 241 47.3
CsaV3_3G006750 Cucumis sativus L. HOM05D001195 ORTHO05D001138 4.6e-48 195.7 287 41.1
ECA236G0676 Erigeron canadensis HOM05D001195 ORTHO05D001138 6.1e-48 195.3 229 48.0
HanXRQChr15g0469651 Helianthus annuus HOM05D001195 ORTHO05D001138 6.1e-48 195.3 228 52.2
Lj9A253G54 Lonicera japonica HOM05D001195 ORTHO05D001138 6.1e-48 195.3 249 46.6
Prupe.1G586700 Prunus persica HOM05D001195 ORTHO05D001138 7.9e-48 194.9 281 45.2
DCAR_001734 Daucus carota HOM05D001195 ORTHO05D001138 3.9e-47 192.6 271 43.5
MELO3C016434.2 Cucumis melo HOM05D001195 ORTHO05D001138 5.1e-47 192.2 296 41.9
HanXRQChr13g0392341 Helianthus annuus HOM05D001195 ORTHO05D001138 6.7e-47 191.8 236 50.4
Sabra01G0175600 Salix brachista HOM05D001195 ORTHO05D001138 6.7e-47 191.8 273 42.5
Actinidia11728 Actinidia chinensis HOM05D001195 ORTHO05D001138 1.1e-46 191.0 280 41.4
Phvul.003G090800 Phaseolus vulgaris HOM05D001195 ORTHO05D001138 1.1e-46 191.0 283 43.5
Sed0022831 Sechium edule HOM05D001195 ORTHO05D001138 1.9e-46 190.3 303 39.6
Dinv38444 Davidia involucrata HOM05D001195 ORTHO05D001138 3.3e-46 189.5 316 42.1
Glyma.17G002500 Glycine max HOM05D001195 ORTHO05D001138 3.3e-46 189.5 293 41.6
Thecc.06G063600 Theobroma cacao HOM05D001195 ORTHO05D001138 3.3e-46 189.5 306 40.2
MSTRG.27887 Avicennia marina HOM05D001195 ORTHO05D001138 7.4e-46 188.3 281 43.4
Dinv29651 Davidia involucrata HOM05D001195 ORTHO05D001138 9.7e-46 188.0 321 41.7
THA.LOC104805130 Tarenaya hassleriana HOM05D001195 ORTHO05D001138 9.7e-46 188.0 278 42.8
Duzib160G0423 Durio zibethinus HOM05D001195 ORTHO05D001138 1.3e-45 187.6 304 41.8
QL02p103695 Quercus lobata HOM05D001195 ORTHO05D001138 1.3e-45 187.6 294 42.5
EL10Ac6g13960 Beta vulgaris HOM05D001195 ORTHO05D001138 1.6e-45 187.2 276 42.0
Cfa004422 Carpinus fangiana HOM05D001195 ORTHO05D001138 2.2e-45 186.8 304 41.4
COL.COLO4_31209 Corchorus olitorius HOM05D001195 ORTHO05D001138 2.8e-45 186.4 308 40.9
unitig_699.g19838 Utricularia gibba HOM05D001195 ORTHO05D001138 2.8e-45 186.4 275 41.8
Glyma.07G271700 Glycine max HOM05D001195 ORTHO05D001138 3.7e-45 186.0 293 40.6
Duzib192G0212 Durio zibethinus HOM05D001195 ORTHO05D001138 6.3e-45 185.3 307 41.0
Ca_13522_v3 Cicer arietinum L. HOM05D001195 ORTHO05D001138 8.2e-45 184.9 288 42.0
Lsat_1_v5_gn_9_83160 Lactuca sativa HOM05D001195 ORTHO05D001138 8.2e-45 184.9 248 46.8
RcHm_v2.0_Chr7g0218871 Rosa chinensis HOM05D001195 ORTHO05D001138 8.2e-45 184.9 273 43.6
PGR142G3909 Punica granatum HOM05D001195 ORTHO05D001138 1.1e-44 184.5 293 39.2
Ciclev10000047m.g Citrus clementina HOM05D001195 ORTHO05D001138 1.4e-44 184.1 316 39.2
Haze_09962 Corylus avellana HOM05D001195 ORTHO05D001138 1.4e-44 184.1 275 44.4
MD08G1249500 Malus domestica HOM05D001195 ORTHO05D001138 1.8e-44 183.7 278 43.2
Gohir.A10G157700 Gossypium hirsutum HOM05D001195 ORTHO05D001138 2.4e-44 183.3 305 39.3
Gohir.D10G083300 Gossypium hirsutum HOM05D001195 ORTHO05D001138 3.1e-44 183.0 305 39.7
VMungo1215G0189 Vigna mungo HOM05D001195 ORTHO05D001138 3.1e-44 183.0 283 42.8
Ah.03g136730 Amaranthus hybridus HOM05D003996 ORTHO05D004665 4.1e-44 182.6 295 41.4
Aqoxy6G00016 Aquilegia oxysepala HOM05D001195 ORTHO05D001138 5.3e-44 182.2 280 41.1
FvH4_5g27450 Fragaria vesca HOM05D001195 ORTHO05D001138 9.0e-44 181.4 281 42.0
FAN13G2666 Fragaria x ananassa HOM05D001195 ORTHO05D001138 9.0e-44 181.4 281 42.0
FAN18G2953 Fragaria x ananassa HOM05D001195 ORTHO05D001138 9.0e-44 181.4 281 42.0
Gorai.011G090600 Gossypium raimondii HOM05D001195 ORTHO05D001138 9.0e-44 181.4 305 38.7
TWI23G0013 Tripterygium wilfordii HOM05D001195 ORTHO05D001138 1.2e-43 181.0 270 44.4
Potri.004G230300 Populus trichocarpa HOM05D001195 ORTHO05D001138 2.0e-43 180.3 273 43.2
arahy.Tifrunner.gnm1.ann1.HJZ3ZC Arachis hypogaea HOM05D001195 ORTHO05D001138 2.6e-43 179.9 275 42.2
FAN08G1514 Fragaria x ananassa HOM05D001195 ORTHO05D001138 2.6e-43 179.9 289 41.2
DCAR_003272 Daucus carota HOM05D001195 ORTHO05D001138 3.4e-43 179.5 329 38.3
FAN04G1500 Fragaria x ananassa HOM05D001195 ORTHO05D001138 3.4e-43 179.5 281 41.6
TWI59G1151 Tripterygium wilfordii HOM05D001195 ORTHO05D001138 3.4e-43 179.5 279 41.9
AUR62032487 Chenopodium quinoa HOM05D001195 ORTHO05D001138 4.5e-43 179.1 265 42.6
Eucgr.I02805 Eucalyptus grandis HOM05D001195 ORTHO05D001138 4.5e-43 179.1 297 39.4
TAR381G0431 Trochodendron aralioides HOM05D001195 ORTHO05D001138 1.0e-42 177.9 323 38.1
PSO210G3331 Papaver somniferum HOM05D001195 ORTHO05D001138 1.3e-42 177.6 260 44.6
AUR62042245 Chenopodium quinoa HOM05D001195 ORTHO05D001138 1.7e-42 177.2 261 42.5
CiPaw.06G176900 Carya illinoinensis HOM05D001195 ORTHO05D001138 2.9e-42 176.4 285 41.1
Potri.003G044900 Populus trichocarpa HOM05D001195 ORTHO05D001138 8.5e-42 174.9 267 39.3
Hund15285 Selenicereus undatus HOM05D001195 ORTHO05D001138 8.5e-42 174.9 276 40.6
CARHR014920 Cardamine hirsuta HOM05D001195 ORTHO05D001138 2.5e-41 173.3 261 41.8
Lalb_Chr07g0176841 Lupinus albus HOM05D001195 ORTHO05D001138 2.5e-41 173.3 285 41.8
Lalb_Chr13g0304431 Lupinus albus HOM05D001195 ORTHO05D001138 2.5e-41 173.3 296 40.5
Psat0s2555g0240 Pisum sativum HOM05D001195 ORTHO05D001138 2.5e-41 173.3 277 42.6
Sp2g13710 Schrenkiella parvula HOM05D001195 ORTHO05D001138 2.5e-41 173.3 257 43.2
CARHR145020 Cardamine hirsuta HOM05D001195 ORTHO05D001138 4.2e-41 172.6 250 42.4
AT2G02480 Arabidopsis thaliana HOM05D001195 ORTHO05D001138 5.5e-41 172.2 257 42.8
Peaxi162Scf00194g01049 Petunia axillaris HOM05D001195 ORTHO05D001138 7.2e-41 171.8 330 37.0
BcaC06g31230 Brassica carinata HOM05D001195 ORTHO05D001138 1.2e-40 171.0 255 42.4
PSO447G0240 Papaver somniferum HOM05D001195 ORTHO05D001138 1.2e-40 171.0 268 43.3
A06p43600 Brassica napus HOM05D001195 ORTHO05D001138 1.6e-40 170.6 255 42.4
BraA06t27243Z Brassica rapa HOM05D001195 ORTHO05D001138 1.6e-40 170.6 255 42.4
AL5G11750 Arabidopsis lyrata HOM05D001195 ORTHO05D001138 2.1e-40 170.2 257 42.4
Thhalv10003531m.g Eutrema salsugineum HOM05D001195 ORTHO05D001138 2.1e-40 170.2 257 42.8
BcaC06g34050 Brassica carinata HOM05D001195 ORTHO05D001138 2.7e-40 169.9 254 42.5
C07p33260 Brassica napus HOM05D001195 ORTHO05D001138 2.7e-40 169.9 254 42.5
BolC7t43837H Brassica oleracea HOM05D001195 ORTHO05D001138 2.7e-40 169.9 254 42.5
AL1G26360 Arabidopsis lyrata HOM05D001195 ORTHO05D001138 1.0e-39 167.9 244 43.4
Carub.0005s0149 Capsella rubella HOM05D001195 ORTHO05D001138 1.4e-39 167.5 251 41.8
Aa31LG2G7640 Aethionema arabicum HOM05D001195 ORTHO05D001138 1.8e-39 167.2 243 42.8
Manes.14G146300 Manihot esculenta HOM05D001195 ORTHO05D001138 3.0e-39 166.4 332 34.3
Carub.0001s1418 Capsella rubella HOM05D001195 ORTHO05D001138 5.1e-39 165.6 244 43.4
AT1G14460 Arabidopsis thaliana HOM05D001195 ORTHO05D001138 8.8e-39 164.9 239 44.4
DCAR_032000 Daucus carota HOM05D001195 ORTHO05D001138 8.8e-39 164.9 283 38.5
Atru.chr6.140 Acer truncatum HOM05D001195 ORTHO05D001138 1.1e-38 164.5 284 39.4
Sp1g12830 Schrenkiella parvula HOM05D001195 ORTHO05D001138 1.1e-38 164.5 242 42.6
CDE02G2658 Ceratophyllum demersum HOM05D001195 ORTHO05D001138 5.7e-38 162.2 275 40.4
BcaC03g17144 Brassica carinata HOM05D001195 ORTHO05D001138 7.4e-38 161.8 242 40.5
SGA_v2.0_scaffold254G45230 Striga asiatica HOM05D001195 ORTHO05D001138 2.8e-37 159.8 275 41.8
BraA02t08311Z Brassica rapa HOM05D001195 ORTHO05D001138 4.8e-37 159.1 241 41.1
CDE04G2297 Ceratophyllum demersum HOM05D001195 ORTHO05D001138 1.4e-36 157.5 280 39.6
Thhalv10006609m.g Eutrema salsugineum HOM05D001195 ORTHO05D001138 1.4e-36 157.5 268 40.3
unitig_747.g21280 Utricularia gibba HOM05D001195 ORTHO05D001138 2.4e-36 156.8 186 49.5
Nn5g27132 Nelumbo nucifera HOM05D001195 ORTHO05D001138 5.3e-36 155.6 315 35.6
Sabra03G0021800 Salix brachista HOM05D001195 ORTHO05D001138 1.2e-35 154.5 295 35.9
A02p32910 Brassica napus HOM05D001195 ORTHO05D001138 1.5e-35 154.1 241 39.8
BcaC05g25350 Brassica carinata HOM05D001195 ORTHO05D001138 2.6e-35 153.3 232 43.1
C05p12290 Brassica napus HOM05D001195 ORTHO05D001138 2.6e-35 153.3 232 43.1
BraA06t24229Z Brassica rapa HOM05D001195 ORTHO05D001138 7.7e-35 151.8 233 43.3
A06p10490 Brassica napus HOM05D001195 ORTHO05D001138 2.2e-34 150.2 234 43.6
BolC5t29981H Brassica oleracea HOM05D001195 ORTHO05D001138 2.2e-34 150.2 236 42.8
BcaB02g06496 Brassica carinata HOM05D001195 ORTHO05D001138 3.8e-34 149.4 236 42.4
Manes.06G013800 Manihot esculenta HOM05D001195 ORTHO05D001138 5.0e-34 149.1 303 35.3
BcaC06g31229 Brassica carinata HOM05D001195 ORTHO05D001138 1.0e-31 141.4 162 50.0
MBI06_g17066_MAGBIO Magnolia biondii HOM05D001195 ORTHO05D001138 1.0e-31 141.4 315 33.0
PSO017G3776 Papaver somniferum HOM05D001195 ORTHO05D001138 8.8e-31 138.3 288 34.0
PSO170G6121 Papaver somniferum HOM05D001195 ORTHO05D001138 3.7e-29 132.9 292 33.2
Zm00001eb151550 Zea mays HOM05D001195 ORTHO05D001138 6.3e-29 132.1 273 33.7
Os12g0209300 Oryza sativa ssp. japonica HOM05D001195 ORTHO05D001138 2.9e-26 123.2 276 33.7
Lj9A228G12 Lonicera japonica HOM05D001195 ORTHO05D001138 1.1e-25 121.3 242 34.3
Cpa.g.sc173.1 Carica papaya HOM05D001195 ORTHO05D001138 2.5e-25 120.2 260 36.9
Aa31LG1G590 Aethionema arabicum HOM05D001195 ORTHO05D001138 4.2e-25 119.4 237 34.6
ATR1089G146 Amborella trichopoda HOM05D001195 ORTHO05D001138 3.6e-24 116.3 297 32.0
C02p50640 Brassica napus HOM05D001195 ORTHO05D001138 8.0e-24 115.2 213 38.0
Actinidia00141 Actinidia chinensis HOM05D001195 ORTHO05D001138 1.8e-23 114.0 85 62.4
BolC2t11147H Brassica oleracea HOM05D001195 ORTHO05D001138 2.6e-22 110.2 207 38.2
HPP92_013455 Vanilla planifolia HOM05D001195 ORTHO05D001138 8.2e-21 105.1 271 29.9
Zm00001eb411140 Zea mays HOM05D001195 ORTHO05D001138 1.7e-18 97.4 223 34.1
HPP92_023740 Vanilla planifolia HOM05D001195 ORTHO05D001138 1.9e-17 94.0 301 29.9
ATR0602G253 Amborella trichopoda HOM05D001195 ORTHO05D001138 9.4e-17 91.7 168 36.9
HPP92_023735 Vanilla planifolia HOM05D001195 ORTHO05D001138 8.0e-16 88.6 80 51.2
Lsat_1_v5_gn_3_67820 Lactuca sativa HOM05D001195 ORTHO05D001138 1.3e-13 81.3 109 43.1
SEGI_40104 Sequoiadendron giganteum HOM05D001195 ORTHO05D001138 5.4e-12 75.9 286 26.6
RcHm_v2.0_Chr2g0146641 Rosa chinensis HOM05D001195 ORTHO05D001138 9.1e-12 75.1 43 76.7
SEGI_28438 Sequoiadendron giganteum HOM05D001195 ORTHO05D001138 3.5e-11 73.2 150 30.0
Aqoxy5G03623 Aquilegia oxysepala HOM05D001195 ORTHO05D001138 1.8e-07 60.8 166 30.1
CDE07G0735 Ceratophyllum demersum HOM05D001195 ORTHO05D001138 6.8e-07 58.9 97 34.0
Cc04_g10730 Coffea canephora HOM05D001195 ORTHO05D001138 1.5e-06 57.8 155 25.8
PSO782G1855 Papaver somniferum HOM05D001195 ORTHO05D001138 2.0e-06 57.4 108 30.6


User provided reference genes

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