Gene: PGSC0003DMG400018259
General Information
Structural Information
- Species Solanum tuberosum
- Gene Identifier PGSC0003DMG400018259
- Transcript Identifier PGSC0003DMT400047011
- Gene Type Coding gene
- Location ST4.03ch01 : 79465130-79471167 : positive
Gene Family Information
- ID HOM05D001195
- #Genes/#Species 523/97
- Phylogenetic origin
- ID ORTHO05D001138
- #Genes/#Species 477/97
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- pacid 37441705
- id PGSC0003DMG400018259.v4.03
- uniprot M1BK13
Descriptions
- Description Replication factor C / DNA polymerase III gamma-tau subunit
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0010026 | ISO | PLAZA Integrative Orthology | trichome differentiation | AT2G02480 |
| GO:0010091 | ISO | PLAZA Integrative Orthology | trichome branching | AT2G02480 |
| GO:0006281 | IBA | GOA Database | DNA repair | |
| GO:0006261 | IBA | GOA Database | DNA-dependent DNA replication | |
| GO:0006260 | IEA | GOA Database | DNA replication | |
| GO:0006260 | IEA | InterPro | DNA replication | |
| GO:0071897 | IEA | GOA Database | DNA biosynthetic process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003689 | IBA | GOA Database | DNA clamp loader activity | |
| GO:0003677 | IEA | GOA Database | DNA binding | |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0003887 | IEA | GOA Database | DNA-directed DNA polymerase activity | |
| GO:0003887 | IEA | InterPro | DNA-directed DNA polymerase activity | |
| GO:0005524 | IEA | GOA Database | ATP binding | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0000166 | IEA | GOA Database | nucleotide binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009360 | IEA | GOA Database | DNA polymerase III complex | |
| GO:0009360 | IEA | InterPro | DNA polymerase III complex | |
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT1G14460 |
| GO:0005634 | IBA | GOA Database | nucleus | |
| GO:0005663 | IBA | GOA Database | DNA replication factor C complex |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR008921 | DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal |
| IPR045085 | DNA polymerase III, subunit gamma/tau, helical lid domain |
| IPR022754 | DNA polymerase III, gamma subunit, domain III |
| IPR012763 | DNA polymerase III, subunit gamma/ tau, N-terminal |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |