Gene: Sopen01g045210
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen01g045210
- Transcript Identifier Sopen01g045210.1
- Gene Type Coding gene
- Location Spenn-ch01 : 102021250-102027212 : positive
Gene Family Information
- ID HOM05D001195
- #Genes/#Species 523/97
- Phylogenetic origin
- ID ORTHO05D001138
- #Genes/#Species 477/97
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Sopen01g045210.1
Descriptions
- Description STICHEL mutant shows trichomes with fewer than normal branches. | STICHEL (STI) | FUNCTIONS IN: DNA binding, DNA-directed DNA polymerase activity, ATP binding | INVOLVED IN: trichome differentiation, trichome branching | LOCATED IN: plasma membrane | EXPRESSED IN: 20 plant structures | EXPRESSED DURING: 11 growth stages | CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core , DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal , DNA polymerase III, subunit gamma/ tau | BEST Arabidopsis thaliana protein match is: AAA-type ATPase family protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006260 | IEA | InterPro | DNA replication | |
| GO:0010091 | ISO | PLAZA Integrative Orthology | trichome branching | AT2G02480 |
| GO:0010026 | ISO | PLAZA Integrative Orthology | trichome differentiation | AT2G02480 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003887 | IEA | InterPro | DNA-directed DNA polymerase activity | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0003677 | IEA | InterPro | DNA binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009360 | IEA | InterPro | DNA polymerase III complex | |
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT1G14460 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR022754 | DNA polymerase III, gamma subunit, domain III |
| IPR012763 | DNA polymerase III, subunit gamma/ tau, N-terminal |
| IPR045085 | DNA polymerase III, subunit gamma/tau, helical lid domain |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR008921 | DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |