Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold7G03887 Striga asiatica HOM05D006314 ORTHO05D007970 9.1e-224 780.0 421 100.0
SalBow8G4748 Salvia bowleyana HOM05D006314 ORTHO05D007970 4.8e-92 342.4 275 73.1
Migut.M01276 Erythranthe guttata HOM05D006314 ORTHO05D007970 6.1e-87 325.5 281 70.1
GSVIVG01012621001 Vitis vinifera HOM05D006314 ORTHO05D007970 7.0e-83 312.0 231 74.0
Potri.004G039400 Populus trichocarpa HOM05D006314 ORTHO05D007970 1.6e-82 310.8 222 79.3
CiPaw.09G085200 Carya illinoinensis HOM05D006314 ORTHO05D007970 1.0e-81 308.1 224 73.7
Gorai.010G176200 Gossypium raimondii HOM05D006314 ORTHO05D007970 2.9e-81 306.6 226 72.6
CiPaw.09G086300 Carya illinoinensis HOM05D006314 ORTHO05D007970 3.8e-81 306.2 224 73.7
COL.COLO4_31719 Corchorus olitorius HOM05D006314 ORTHO05D007970 8.6e-81 305.1 225 76.0
ECA236G4636 Erigeron canadensis HOM05D006314 ORTHO05D007970 3.3e-80 303.1 233 71.2
Gohir.A06G145000 Gossypium hirsutum HOM05D006314 ORTHO05D007970 4.2e-80 302.8 226 68.6
Prupe.4G027100 Prunus persica HOM05D006314 ORTHO05D007970 6.1e-79 298.9 225 73.3
Manes.14G141100 Manihot esculenta HOM05D006314 ORTHO05D007970 1.4e-78 297.7 225 74.2
Duzib235G0913 Durio zibethinus HOM05D006314 ORTHO05D007970 6.8e-78 295.4 248 63.3
Lsat_1_v5_gn_7_17861 Lactuca sativa HOM05D006314 ORTHO05D007970 7.5e-77 292.0 225 75.6
QL05p075316 Quercus lobata HOM05D006314 ORTHO05D007970 9.8e-77 291.6 223 72.2
Cfa021643 Carpinus fangiana HOM05D006314 ORTHO05D007970 1.3e-76 291.2 223 74.0
Sabra04G0024200 Salix brachista HOM05D006314 ORTHO05D007970 1.7e-76 290.8 264 59.8
Hund21374 Selenicereus undatus HOM05D006314 ORTHO05D007970 2.2e-76 290.4 242 62.4
HanXRQChr05g0130041 Helianthus annuus HOM05D006314 ORTHO05D007970 4.9e-76 289.3 296 61.1
Ciclev10018286m.g Citrus clementina HOM05D006314 ORTHO05D007970 1.6e-74 284.3 226 74.8
Aqoxy5G01372 Aquilegia oxysepala HOM05D006314 ORTHO05D007970 1.3e-73 281.2 221 71.9
Nn1g03656 Nelumbo nucifera HOM05D006314 ORTHO05D007970 3.8e-73 279.6 233 68.7
CAN.G404.73 Capsicum annuum HOM05D006314 ORTHO05D007970 5.0e-73 279.3 234 64.5
MD05G1340500 Malus domestica HOM05D006314 ORTHO05D007970 2.5e-72 276.9 227 70.9
Ah.14g088200 Amaranthus hybridus HOM05D006314 ORTHO05D007970 3.3e-72 276.6 229 62.9
AL6G48810 Arabidopsis lyrata HOM05D006314 ORTHO05D007970 7.3e-72 275.4 234 58.5
EL10Ac8g19905 Beta vulgaris HOM05D006314 ORTHO05D007970 1.6e-71 274.2 225 66.7
Haze_06726 Corylus avellana HOM05D006314 ORTHO05D007970 6.1e-71 272.3 267 62.2
ATR0618G448 Amborella trichopoda HOM05D006314 ORTHO05D007970 1.4e-70 271.2 266 63.2
Gohir.D06G151200 Gossypium hirsutum HOM05D006314 ORTHO05D007970 1.8e-70 270.8 169 73.4
CsaV3_6G049280 Cucumis sativus L. HOM05D006314 ORTHO05D007970 8.9e-70 268.5 223 72.2
Actinidia05538 Actinidia chinensis HOM05D006314 ORTHO05D007970 2.0e-69 267.3 239 68.2
SEGI_37493 Sequoiadendron giganteum HOM05D006314 ORTHO05D007970 2.0e-69 267.3 226 59.7
MBI02_g34312_MAGBIO Magnolia biondii HOM05D006314 ORTHO05D007970 4.4e-69 266.2 249 65.5
Solyc03g031560.4 Solanum lycopersicum HOM05D006314 ORTHO05D007970 5.8e-69 265.8 249 57.0
AL7G32880 Arabidopsis lyrata HOM05D006314 ORTHO05D007970 1.9e-67 260.8 224 63.4
CANSAT56G1066 Cannabis sativa HOM05D006314 ORTHO05D007970 1.9e-67 260.8 226 69.5
HPP92_009390 Vanilla planifolia HOM05D006314 ORTHO05D007970 4.1e-67 259.6 244 61.9
Oeu002711.1 Olea europaea HOM05D006314 ORTHO05D007970 5.4e-67 259.2 225 68.9
PSO541G6217 Papaver somniferum HOM05D006314 ORTHO05D007970 5.4e-67 259.2 296 53.7
PSO675G3227 Papaver somniferum HOM05D006314 ORTHO05D007970 1.2e-66 258.1 294 53.7
A09p25520 Brassica napus HOM05D006314 ORTHO05D007970 2.7e-66 256.9 232 58.6
Carub.0007s2019 Capsella rubella HOM05D006314 ORTHO05D007970 2.7e-66 256.9 224 62.5
BcaC04g21385 Brassica carinata HOM05D006314 ORTHO05D007970 3.5e-66 256.5 232 58.2
C09p32430 Brassica napus HOM05D006314 ORTHO05D007970 3.5e-66 256.5 232 58.2
BolC9t56088H Brassica oleracea HOM05D006314 ORTHO05D007970 3.5e-66 256.5 232 58.2
BcaB01g01893 Brassica carinata HOM05D006314 ORTHO05D007970 7.8e-66 255.4 224 59.4
HPP92_009395 Vanilla planifolia HOM05D006314 ORTHO05D007970 1.0e-65 255.0 235 63.4
BraA09t38127Z Brassica rapa HOM05D006314 ORTHO05D007970 1.3e-65 254.6 232 57.8
CARHR227820 Cardamine hirsuta HOM05D006314 ORTHO05D007970 1.7e-65 254.2 224 69.2
AT4G05210 Arabidopsis thaliana HOM05D006314 ORTHO05D007970 2.3e-65 253.8 221 59.7
Cpa.g.sc81.24 Carica papaya HOM05D006314 ORTHO05D007970 3.0e-65 253.4 225 59.6
Sopen03g005440 Solanum pennellii HOM05D006314 ORTHO05D007970 8.6e-65 251.9 235 66.0
AT4G21220 Arabidopsis thaliana HOM05D006314 ORTHO05D007970 1.5e-64 251.1 223 60.1
MELO3C007369.2 Cucumis melo HOM05D006314 ORTHO05D007970 1.5e-64 251.1 214 72.0
Lj1A1224T36 Lonicera japonica HOM05D006314 ORTHO05D007970 3.3e-64 250.0 216 70.8
Actinidia26953 Actinidia chinensis HOM05D006314 ORTHO05D007970 5.6e-64 249.2 169 78.1
PGR031G0385 Punica granatum HOM05D006314 ORTHO05D007970 7.3e-64 248.8 228 66.7
FAN21G1433 Fragaria x ananassa HOM05D006314 ORTHO05D007970 1.1e-62 245.0 281 51.2
Medtr7g047630 Medicago truncatula HOM05D006314 ORTHO05D007970 1.4e-62 244.6 223 65.9
Medtr7g451810 Medicago truncatula HOM05D006314 ORTHO05D007970 1.4e-62 244.6 223 65.9
TPR.G10185 Trifolium pratense HOM05D006314 ORTHO05D007970 1.4e-62 244.6 224 66.5
Thhalv10025838m.g Eutrema salsugineum HOM05D006314 ORTHO05D007970 2.3e-62 243.8 224 64.3
FvH4_3g02730 Fragaria vesca HOM05D006314 ORTHO05D007970 2.3e-62 243.8 225 65.3
DCAR_004187 Daucus carota HOM05D006314 ORTHO05D007970 3.1e-62 243.4 225 63.1
RcHm_v2.0_Chr5g0004131 Rosa chinensis HOM05D006314 ORTHO05D007970 6.8e-62 242.3 223 65.0
Haze_06729 Corylus avellana HOM05D006314 ORTHO05D007970 1.2e-61 241.5 164 77.4
Phvul.002G049200 Phaseolus vulgaris HOM05D006314 ORTHO05D007970 4.4e-61 239.6 224 62.5
Thecc.06G213300 Theobroma cacao HOM05D006314 ORTHO05D007970 5.8e-61 239.2 166 75.3
Glyma.01G240700 Glycine max HOM05D006314 ORTHO05D007970 7.5e-61 238.8 223 63.2
VMungo1215G0781 Vigna mungo HOM05D006314 ORTHO05D007970 7.5e-61 238.8 231 61.5
THA.LOC104812945 Tarenaya hassleriana HOM05D006314 ORTHO05D007970 1.3e-60 238.0 246 60.2
CDE05G2602 Ceratophyllum demersum HOM05D006314 ORTHO05D007970 1.7e-60 237.7 228 57.9
ClCG01G022220 Citrullus lanatus HOM05D006314 ORTHO05D007970 2.2e-60 237.3 214 70.1
Aa31LG9G9230 Aethionema arabicum HOM05D006314 ORTHO05D007970 3.7e-60 236.5 245 55.1
Cc00_g17320 Coffea canephora HOM05D006314 ORTHO05D007970 4.9e-60 236.1 224 67.0
Lj1g0010466 Lotus japonicus HOM05D006314 ORTHO05D007970 1.4e-59 234.6 250 57.6
Eucgr.D00832 Eucalyptus grandis HOM05D006314 ORTHO05D007970 3.2e-59 233.4 223 61.9
Mapoly0013s0096 Marchantia polymorpha HOM05D006314 ORTHO05D007970 3.2e-59 233.4 242 56.2
Rhsim13G0158200 Rhododendron simsii HOM05D006314 ORTHO05D007970 6.0e-58 229.2 247 61.1
vmacro03713 Vaccinium macrocarpon HOM05D006314 ORTHO05D007970 6.0e-58 229.2 170 70.6
Ca_07429_v3 Cicer arietinum L. HOM05D006314 ORTHO05D007970 5.1e-57 226.1 219 62.1
FAN25G2977 Fragaria x ananassa HOM05D006314 ORTHO05D007970 2.5e-56 223.8 320 45.9
AUR62012635 Chenopodium quinoa HOM05D006314 ORTHO05D007970 2.0e-53 214.2 240 57.1
Nitab4.5_0004428g0040 Nicotiana tabacum HOM05D006314 ORTHO05D007970 2.0e-53 214.2 241 47.3
Lalb_Chr16g0376341 Lupinus albus HOM05D006314 ORTHO05D007970 3.7e-52 209.9 224 61.2
Dinv17838 Davidia involucrata HOM05D006314 ORTHO05D007970 4.9e-52 209.5 150 75.3
CBR_g20160 Chara braunii HOM05D006314 ORTHO05D007970 8.3e-52 208.8 232 57.3
AagrBONN_evm.TU.Sc2ySwM_228.2540 Anthoceros agrestis HOM05D006314 ORTHO05D007970 1.9e-51 207.6 229 59.4
Hma1.2p1_0729F.1_g209630 Hydrangea macrophylla HOM05D006314 ORTHO05D007970 1.6e-50 204.5 169 60.4
PGSC0003DMG400005049 Solanum tuberosum HOM05D006314 ORTHO05D007970 2.1e-50 204.1 164 64.6
Zm00001eb306890 Zea mays HOM05D006314 ORTHO05D007970 3.5e-50 203.4 226 59.7
Sp6g03780 Schrenkiella parvula HOM05D006314 ORTHO05D007970 2.3e-49 200.7 221 58.4
TWI38G0264 Tripterygium wilfordii HOM05D006314 ORTHO05D007970 1.6e-47 194.5 261 47.9
Psat3g152680 Pisum sativum HOM05D006314 ORTHO05D007970 8.1e-47 192.2 174 61.5
Nitab4.5_0000900g0100 Nicotiana tabacum HOM05D006314 ORTHO05D007970 1.4e-46 191.4 249 50.6
Sc05g0008810 Simmondsia chinensis HOM05D006314 ORTHO05D007970 1.8e-46 191.0 270 48.5
Pp3c4_25780 Physcomitrium patens HOM05D006314 ORTHO05D007970 6.8e-46 189.1 228 57.5
arahy.Tifrunner.gnm1.ann1.PEH28W Arachis hypogaea HOM05D006314 ORTHO05D007970 5.4e-43 179.5 224 54.5
arahy.Tifrunner.gnm1.ann1.937J55 Arachis hypogaea HOM05D006314 ORTHO05D007970 1.2e-42 178.3 214 56.1
AUR62022021 Chenopodium quinoa HOM05D006314 ORTHO05D007970 2.7e-42 177.2 229 47.2
Glyma.11G002900 Glycine max HOM05D006314 ORTHO05D007970 3.0e-41 173.7 161 54.0
MSTRG.16127 Avicennia marina HOM05D006314 ORTHO05D007970 2.5e-40 170.6 161 59.0
CSS0045332 Camellia sinensis var. sinensis HOM05D006314 ORTHO05D007970 4.4e-37 159.8 151 67.5
Nn5g27983 Nelumbo nucifera HOM05D006314 ORTHO05D007970 6.4e-36 156.0 122 59.8
unitig_748.g7139 Utricularia gibba HOM05D006350 ORTHO05D007850 4.2e-35 153.3 148 53.4
PRCOL_00005452 Prasinoderma coloniale HOM05D006314 ORTHO05D007970 7.8e-34 149.1 228 46.5
Peaxi162Scf00781g00047 Petunia axillaris HOM05D006314 ORTHO05D007970 1.3e-33 148.3 258 44.2
Sed0025568 Sechium edule HOM05D006314 ORTHO05D007970 3.0e-33 147.1 214 52.3
SMO004G0010 Selaginella moellendorffii HOM05D006314 ORTHO05D007970 3.3e-32 143.7 222 45.0
TAR627G0699 Trochodendron aralioides HOM05D006314 ORTHO05D007970 4.0e-30 136.7 98 81.6
CSS0018641 Camellia sinensis var. sinensis HOM05D006314 ORTHO05D007970 2.1e-23 114.4 107 63.6
SMO361G0013 Selaginella moellendorffii HOM05D006314 ORTHO05D007970 4.5e-21 106.7 213 40.8
Os07g0134400 Oryza sativa ssp. japonica HOM05D006314 ORTHO05D007970 5.6e-16 89.7 103 53.4
Lsat_1_v5_gn_5_88320 Lactuca sativa HOM05D006314 ORTHO05D007970 2.4e-14 84.3 89 46.1
FAN25G3594 Fragaria x ananassa HOM05D006314 ORTHO05D007970 2.9e-12 77.4 43 76.7
Sp7g19320 Schrenkiella parvula HOM05D006314 ORTHO05D007970 5.1e-09 66.6 190 27.4
MD10G1313900 Malus domestica HOM05D006314 ORTHO05D030082 1.6e-07 61.6 61 50.8
QL05p075461 Quercus lobata HOM05D006314 ORTHO05D030082 4.8e-07 60.1 78 42.3
QL08p032503 Quercus lobata HOM05D006314 ORTHO05D030082 4.1e-06 57.0 44 61.4


User provided reference genes

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