Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold79G25606 Striga asiatica HOM05D006724 ORTHO05D008514 1.3e-39 166.4 78 100.0
TWI32G0858 Tripterygium wilfordii HOM05D006724 ORTHO05D008514 4.2e-11 71.6 61 59.0
Lalb_Chr01g0006641 Lupinus albus HOM05D006724 ORTHO05D008514 7.2e-11 70.9 59 57.6
SGA_v2.0_scaffold34G13794 Striga asiatica HOM05D006724 ORTHO05D008514 7.2e-11 70.9 34 85.3
Gohir.D01G047400 Gossypium hirsutum HOM05D006724 ORTHO05D008514 1.2e-10 70.1 41 68.3
Gorai.002G066900 Gossypium raimondii HOM05D006724 ORTHO05D008514 1.2e-10 70.1 41 68.3
Lj3g0025660 Lotus japonicus HOM05D006724 ORTHO05D008514 1.2e-10 70.1 59 55.9
MSTRG.15243 Avicennia marina HOM05D006724 ORTHO05D008514 1.6e-10 69.7 45 68.9
CSS0014927 Camellia sinensis var. sinensis HOM05D006724 ORTHO05D008514 1.6e-10 69.7 41 73.2
Migut.M00774 Erythranthe guttata HOM05D006724 ORTHO05D008514 2.1e-10 69.3 34 79.4
Gohir.A01G060866 Gossypium hirsutum HOM05D006724 ORTHO05D008514 3.6e-10 68.6 34 76.5
Gohir.A01G060932 Gossypium hirsutum HOM05D006724 ORTHO05D008514 3.6e-10 68.6 34 76.5
Duzib213G0893 Durio zibethinus HOM05D006724 ORTHO05D008514 6.1e-10 67.8 42 64.3
Nitab4.5_0000246g0080 Nicotiana tabacum HOM05D006724 ORTHO05D008514 6.1e-10 67.8 45 64.4
Ca_07350_v3 Cicer arietinum L. HOM05D006724 ORTHO05D008514 7.9e-10 67.4 41 68.3
Sc03g0010250 Simmondsia chinensis HOM05D006724 ORTHO05D008514 7.9e-10 67.4 41 61.0
PGSC0003DMG400012400 Solanum tuberosum HOM05D006724 ORTHO05D008514 7.9e-10 67.4 45 64.4
Thecc.07G098800 Theobroma cacao HOM05D006724 ORTHO05D008514 7.9e-10 67.4 34 76.5
Glyma.06G234800 Glycine max HOM05D006724 ORTHO05D008514 1.0e-09 67.0 43 62.8
vmacro09520 Vaccinium macrocarpon HOM05D006724 ORTHO05D008514 1.0e-09 67.0 45 66.7
arahy.Tifrunner.gnm1.ann1.60K44K Arachis hypogaea HOM05D006724 ORTHO05D008514 1.4e-09 66.6 39 71.8
CiPaw.11G166800 Carya illinoinensis HOM05D006724 ORTHO05D008514 1.4e-09 66.6 41 65.9
Hma1.2p1_0416F.1_g148420 Hydrangea macrophylla HOM05D006724 ORTHO05D008514 1.4e-09 66.6 58 56.9
Hma1.2p1_0416F.1_g148440 Hydrangea macrophylla HOM05D006724 ORTHO05D008514 1.4e-09 66.6 58 56.9
Lj8C153G9 Lonicera japonica HOM05D006724 ORTHO05D008514 1.4e-09 66.6 60 55.0
Medtr8g061030 Medicago truncatula HOM05D006724 ORTHO05D008514 1.4e-09 66.6 41 68.3
Solyc07g062750.4 Solanum lycopersicum HOM05D006724 ORTHO05D008514 1.4e-09 66.6 34 76.5
Sopen07g030980 Solanum pennellii HOM05D006724 ORTHO05D008514 1.4e-09 66.6 34 76.5
Actinidia18778 Actinidia chinensis HOM05D006724 ORTHO05D008514 2.3e-09 65.9 41 68.3
EL10Ac4g08255 Beta vulgaris HOM05D006724 ORTHO05D008514 2.3e-09 65.9 41 61.0
AUR62036149 Chenopodium quinoa HOM05D006724 ORTHO05D008514 2.3e-09 65.9 41 61.0
PSO832G3136 Papaver somniferum HOM05D006724 ORTHO05D008514 2.3e-09 65.9 41 68.3
Rhsim04G0022800 Rhododendron simsii HOM05D006724 ORTHO05D008514 2.3e-09 65.9 45 64.4
GSVIVG01014275001 Vitis vinifera HOM05D006724 ORTHO05D008514 2.3e-09 65.9 34 76.5
CAN.G162.28 Capsicum annuum HOM05D006724 ORTHO05D008514 3.0e-09 65.5 34 76.5
Dinv14945 Davidia involucrata HOM05D006724 ORTHO05D008514 3.0e-09 65.5 41 68.3
TPR.G28169 Trifolium pratense HOM05D006724 ORTHO05D008514 3.0e-09 65.5 41 70.7
arahy.Tifrunner.gnm1.ann1.N2BE0G Arachis hypogaea HOM05D006724 ORTHO05D008514 3.9e-09 65.1 34 73.5
arahy.Tifrunner.gnm1.ann1.WDE0T2 Arachis hypogaea HOM05D006724 ORTHO05D008514 3.9e-09 65.1 34 73.5
Cfa020617 Carpinus fangiana HOM05D006724 ORTHO05D008514 3.9e-09 65.1 62 53.2
THA.LOC104818095 Tarenaya hassleriana HOM05D006724 ORTHO05D008514 3.9e-09 65.1 45 60.0
unitig_85.g27410 Utricularia gibba HOM05D006724 ORTHO05D008514 3.9e-09 65.1 45 57.8
unitig_86.g29838 Utricularia gibba HOM05D006724 ORTHO05D008514 3.9e-09 65.1 45 57.8
Nitab4.5_0000831g0090 Nicotiana tabacum HOM05D006724 ORTHO05D008514 5.1e-09 64.7 45 60.0
SalBow8G1625 Salvia bowleyana HOM05D006724 ORTHO05D008514 5.1e-09 64.7 41 65.9
Hund22831 Selenicereus undatus HOM05D006724 ORTHO05D008514 5.1e-09 64.7 34 67.6
AUR62019487 Chenopodium quinoa HOM05D006724 ORTHO05D008514 6.7e-09 64.3 34 67.6
Haze_09388 Corylus avellana HOM05D006724 ORTHO05D008514 1.1e-08 63.5 60 55.0
ECA240G0540 Erigeron canadensis HOM05D006724 ORTHO05D008514 1.1e-08 63.5 41 63.4
MD11G1255900 Malus domestica HOM05D006724 ORTHO05D008514 1.1e-08 63.5 41 63.4
PGR083G0421 Punica granatum HOM05D006724 ORTHO05D008514 1.1e-08 63.5 41 63.4
QL08p023685 Quercus lobata HOM05D006724 ORTHO05D008514 1.1e-08 63.5 60 53.3
Prupe.4G173900 Prunus persica HOM05D006724 ORTHO05D008514 1.5e-08 63.2 41 63.4
VMungo1127G0638 Vigna mungo HOM05D006724 ORTHO05D008514 1.5e-08 63.2 41 63.4
Cc05_g11660 Coffea canephora HOM05D006724 ORTHO05D008514 1.9e-08 62.8 59 50.8
Eucgr.F01176 Eucalyptus grandis HOM05D006724 ORTHO05D008514 1.9e-08 62.8 59 50.8
Psat4g169400 Pisum sativum HOM05D006724 ORTHO05D008514 1.9e-08 62.8 53 56.6
Cpa.g.sc80.3 Carica papaya HOM05D006724 ORTHO05D006683 2.5e-08 62.4 60 50.0
Potri.011G141300 Populus trichocarpa HOM05D006724 ORTHO05D008514 2.5e-08 62.4 42 57.1
Sabra11G0126900 Salix brachista HOM05D006724 ORTHO05D008514 2.5e-08 62.4 42 57.1
Ciclev10010824m.g Citrus clementina HOM05D006724 ORTHO05D008514 3.3e-08 62.0 39 66.7
HanXRQChr12g0364011 Helianthus annuus HOM05D006724 ORTHO05D008514 3.3e-08 62.0 41 58.5
Peaxi162Scf00069g01835 Petunia axillaris HOM05D006724 ORTHO05D008514 3.3e-08 62.0 45 60.0
Ah.04g164500 Amaranthus hybridus HOM05D006724 ORTHO05D008514 4.3e-08 61.6 45 53.3
Carub.0003s1479 Capsella rubella HOM05D006724 ORTHO05D008514 4.3e-08 61.6 53 49.1
Atru.chr2.2388 Acer truncatum HOM05D006724 ORTHO05D008514 5.7e-08 61.2 34 67.6
DCAR_017097 Daucus carota HOM05D006724 ORTHO05D008514 5.7e-08 61.2 34 67.6
Aqoxy4G00591 Aquilegia oxysepala HOM05D006724 ORTHO05D008514 7.4e-08 60.8 41 61.0
CANSAT35G1416 Cannabis sativa HOM05D006724 ORTHO05D008514 7.4e-08 60.8 45 57.8
DCAR_013127 Daucus carota HOM05D006724 ORTHO05D008514 9.7e-08 60.5 34 67.6
Pp3c27_5050 Physcomitrium patens HOM05D006724 ORTHO05D008514 9.7e-08 60.5 41 58.5
AL3G27530 Arabidopsis lyrata HOM05D006724 ORTHO05D008514 1.3e-07 60.1 45 55.6
Phvul.011G156700 Phaseolus vulgaris HOM05D006724 ORTHO05D008514 1.3e-07 60.1 34 67.6
ATR0602G031 Amborella trichopoda HOM05D006724 ORTHO05D008514 1.7e-07 59.7 34 73.5
AT3G15140 Arabidopsis thaliana HOM05D006724 ORTHO05D008514 1.7e-07 59.7 34 61.8
ClCG11G017740 Citrullus lanatus HOM05D006724 ORTHO05D008514 1.7e-07 59.7 45 57.8
MELO3C025618.2 Cucumis melo HOM05D006724 ORTHO05D008514 1.7e-07 59.7 45 57.8
CsaV3_4G033360 Cucumis sativus L. HOM05D006724 ORTHO05D008514 1.7e-07 59.7 45 57.8
DCAR_013126 Daucus carota HOM05D006724 ORTHO05D008514 1.7e-07 59.7 34 61.8
DCAR_017120 Daucus carota HOM05D006724 ORTHO05D008514 1.7e-07 59.7 41 56.1
RcHm_v2.0_Chr5g0032321 Rosa chinensis HOM05D006724 ORTHO05D008514 1.7e-07 59.7 45 55.6
Zm00001eb281480 Zea mays HOM05D006724 ORTHO05D008514 2.2e-07 59.3 62 50.0
Sed0012116 Sechium edule HOM05D006724 ORTHO05D008514 2.8e-07 58.9 44 50.0
FvH4_3g19250 Fragaria vesca HOM05D006724 ORTHO05D008514 3.7e-07 58.5 45 51.1
FAN11G3114 Fragaria x ananassa HOM05D006724 ORTHO05D008514 3.7e-07 58.5 45 51.1
FAN16G1823 Fragaria x ananassa HOM05D006724 ORTHO05D008514 3.7e-07 58.5 37 56.8
FAN21G1177 Fragaria x ananassa HOM05D006724 ORTHO05D008514 3.7e-07 58.5 34 58.8
FAN25G2812 Fragaria x ananassa HOM05D006724 ORTHO05D008514 3.7e-07 58.5 45 51.1
Mapoly0005s0020 Marchantia polymorpha HOM05D006724 ORTHO05D008514 3.7e-07 58.5 34 64.7
HPP92_003869 Vanilla planifolia HOM05D006724 ORTHO05D008514 3.7e-07 58.5 34 67.6
HPP92_003898 Vanilla planifolia HOM05D006724 ORTHO05D008514 4.8e-07 58.2 34 64.7
Aa31LG8G2350 Aethionema arabicum HOM05D006724 ORTHO05D008514 6.3e-07 57.8 34 61.8
Manes.03G104800 Manihot esculenta HOM05D006724 ORTHO05D008514 6.3e-07 57.8 42 50.0
Sp3g13350 Schrenkiella parvula HOM05D006724 ORTHO05D008514 6.3e-07 57.8 45 53.3
Aqoxy4G00685 Aquilegia oxysepala HOM05D006724 ORTHO05D008514 1.1e-06 57.0 41 58.5
CARHR090120 Cardamine hirsuta HOM05D006724 ORTHO05D008514 1.4e-06 56.6 34 58.8
Thhalv10021514m.g Eutrema salsugineum HOM05D006724 ORTHO05D008514 1.4e-06 56.6 34 58.8
A05p34310 Brassica napus HOM05D006724 ORTHO05D008514 1.8e-06 56.2 45 48.9
C05p52090 Brassica napus HOM05D006724 ORTHO05D008514 1.8e-06 56.2 45 48.9
BolC5t33894H Brassica oleracea HOM05D006724 ORTHO05D008514 1.8e-06 56.2 45 48.9
BraA05t22252Z Brassica rapa HOM05D006724 ORTHO05D008514 1.8e-06 56.2 45 48.9
SMO367G0863 Selaginella moellendorffii HOM05D006724 ORTHO05D008514 2.4e-06 55.8 34 61.8
BcaB06g29538 Brassica carinata HOM05D006724 ORTHO05D008514 3.1e-06 55.5 45 48.9
AagrBONN_evm.TU.Sc2ySwM_340.295 Anthoceros agrestis HOM05D006724 ORTHO05D008514 6.9e-06 54.3 45 48.9


User provided reference genes

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