Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold69G23116 Striga asiatica HOM05D005933 ORTHO05D007366 6.1e-291 1003.4 512 100.0
MSTRG.19860 Avicennia marina HOM05D005933 ORTHO05D007366 1.9e-183 646.4 467 70.9
Migut.J01758 Erythranthe guttata HOM05D005933 ORTHO05D007366 4.9e-179 631.7 469 68.9
SalBow6G0452 Salvia bowleyana HOM05D005933 ORTHO05D007366 4.1e-178 628.6 476 68.1
Oeu017944.1 Olea europaea HOM05D005933 ORTHO05D007366 1.7e-163 580.1 473 64.1
Solyc10g080110.3 Solanum lycopersicum HOM05D005933 ORTHO05D007366 1.2e-153 547.4 471 61.8
PGSC0003DMG400023688 Solanum tuberosum HOM05D005933 ORTHO05D007366 1.2e-153 547.4 473 61.7
Sopen10g030730 Solanum pennellii HOM05D005933 ORTHO05D007366 2.1e-153 546.6 471 61.8
Actinidia39225 Actinidia chinensis HOM05D005933 ORTHO05D007366 6.0e-153 545.0 470 60.6
Rhsim03G0021100 Rhododendron simsii HOM05D005933 ORTHO05D007366 1.0e-152 544.3 468 59.2
Rhsim03G0022400 Rhododendron simsii HOM05D005933 ORTHO05D007366 1.0e-152 544.3 473 60.0
Actinidia09329 Actinidia chinensis HOM05D005933 ORTHO05D007366 2.8e-150 536.2 469 59.5
Nitab4.5_0008648g0010 Nicotiana tabacum HOM05D005933 ORTHO05D007366 3.6e-150 535.8 480 59.2
Lju124A41G42 Lonicera japonica HOM05D005933 ORTHO05D007366 1.2e-148 530.8 446 60.8
Peaxi162Scf00618g00022 Petunia axillaris HOM05D005933 ORTHO05D007366 7.6e-148 528.1 469 59.5
CSS0022562 Camellia sinensis var. sinensis HOM05D005933 ORTHO05D007366 1.3e-147 527.3 468 58.3
GSVIVG01033275001 Vitis vinifera HOM05D005933 ORTHO05D007366 8.4e-147 524.6 457 58.2
Nitab4.5_0009442g0020 Nicotiana tabacum HOM05D005933 ORTHO05D007366 1.4e-146 523.9 472 59.5
Cc06_g17560 Coffea canephora HOM05D005933 ORTHO05D007366 4.1e-146 522.3 462 60.6
Dinv39604 Davidia involucrata HOM05D005933 ORTHO05D007366 7.3e-143 511.5 405 66.4
vmacro07854 Vaccinium macrocarpon HOM05D005933 ORTHO05D007366 7.3e-143 511.5 502 55.2
Hma1.2p1_2002F.1_g310760 Hydrangea macrophylla HOM05D005933 ORTHO05D007366 6.9e-141 505.0 455 59.3
Peaxi162Scf00354g00225 Petunia axillaris HOM05D005933 ORTHO05D007366 4.4e-140 502.3 454 59.3
Ciclev10004945m.g Citrus clementina HOM05D005933 ORTHO05D007366 9.9e-140 501.1 468 55.8
Haze_19854 Corylus avellana HOM05D005933 ORTHO05D007366 1.3e-139 500.7 455 58.0
RcHm_v2.0_Chr3g0482381 Rosa chinensis HOM05D005933 ORTHO05D007366 1.3e-139 500.7 469 54.8
TWI74G0083 Tripterygium wilfordii HOM05D005933 ORTHO05D007366 2.7e-137 493.0 470 54.7
CiPaw.08G166600 Carya illinoinensis HOM05D005933 ORTHO05D007366 1.3e-136 490.7 468 55.8
Sabra06G0036000 Salix brachista HOM05D005933 ORTHO05D007366 2.3e-136 490.0 451 57.2
Gorai.007G186200 Gossypium raimondii HOM05D005933 ORTHO05D007366 3.9e-136 489.2 469 55.2
Gohir.D11G173800 Gossypium hirsutum HOM05D005933 ORTHO05D007366 5.1e-136 488.8 469 55.0
Potri.006G051300 Populus trichocarpa HOM05D005933 ORTHO05D007366 8.7e-136 488.0 467 55.7
MD12G1074000 Malus domestica HOM05D005933 ORTHO05D007366 1.1e-135 487.6 470 54.0
Duzib093G2041 Durio zibethinus HOM05D005933 ORTHO05D007366 2.5e-135 486.5 469 54.4
QL07p000522 Quercus lobata HOM05D005933 ORTHO05D007366 4.3e-135 485.7 468 54.5
Gohir.A11G167500 Gossypium hirsutum HOM05D005933 ORTHO05D007366 5.6e-135 485.3 470 56.0
FvH4_6g23820 Fragaria vesca HOM05D005933 ORTHO05D007366 4.8e-134 482.3 468 53.6
QL07p000555 Quercus lobata HOM05D005933 ORTHO05D007366 4.8e-134 482.3 471 54.8
FAN05G5216 Fragaria x ananassa HOM05D005933 ORTHO05D007366 6.2e-134 481.9 471 53.9
FAN14G1069 Fragaria x ananassa HOM05D005933 ORTHO05D007366 6.2e-134 481.9 464 53.9
HanXRQChr09g0252561 Helianthus annuus HOM05D005933 ORTHO05D007366 6.2e-134 481.9 463 55.9
Lj1g0013042 Lotus japonicus HOM05D005933 ORTHO05D007366 6.2e-134 481.9 468 53.6
FAN02G2268 Fragaria x ananassa HOM05D005933 ORTHO05D007366 1.1e-133 481.1 471 53.5
Lsat_1_v5_gn_8_81281 Lactuca sativa HOM05D005933 ORTHO05D007366 1.8e-133 480.3 465 55.3
Manes.09G022000 Manihot esculenta HOM05D005933 ORTHO05D007366 9.0e-133 478.0 473 53.9
CANSAT78G0457 Cannabis sativa HOM05D005933 ORTHO05D007366 1.2e-132 477.6 474 54.2
arahy.Tifrunner.gnm1.ann1.T110QE Arachis hypogaea HOM05D005933 ORTHO05D007366 1.5e-132 477.2 468 53.6
Thecc.05G153300 Theobroma cacao HOM05D005933 ORTHO05D007366 1.5e-132 477.2 470 53.8
Phvul.001G132100 Phaseolus vulgaris HOM05D005933 ORTHO05D007366 2.0e-132 476.9 468 53.2
arahy.Tifrunner.gnm1.ann1.EHL0AN Arachis hypogaea HOM05D005933 ORTHO05D007366 5.8e-132 475.3 467 52.9
Ca_08457_v3 Cicer arietinum L. HOM05D005933 ORTHO05D007366 1.3e-131 474.2 468 53.0
COL.COLO4_28284 Corchorus olitorius HOM05D005933 ORTHO05D007366 1.7e-131 473.8 469 52.5
Glyma.03G136900 Glycine max HOM05D005933 ORTHO05D007366 1.7e-131 473.8 468 52.8
Sp7g34530 Schrenkiella parvula HOM05D005933 ORTHO05D007366 1.7e-131 473.8 477 52.6
Lalb_Chr25g0287121 Lupinus albus HOM05D005933 ORTHO05D007366 2.2e-131 473.4 467 53.3
Medtr7g091500 Medicago truncatula HOM05D005933 ORTHO05D007366 2.9e-131 473.0 468 53.4
AUR62026040 Chenopodium quinoa HOM05D005933 ORTHO05D007366 4.2e-130 469.2 469 53.7
Psat3g072720 Pisum sativum HOM05D005933 ORTHO05D007366 5.4e-130 468.8 469 52.9
CARHR244310 Cardamine hirsuta HOM05D005933 ORTHO05D007366 4.6e-129 465.7 476 51.7
MELO3C009712.2 Cucumis melo HOM05D005933 ORTHO05D007366 7.9e-129 464.9 472 54.0
Cpa.g.sc92.52 Carica papaya HOM05D005933 ORTHO05D007366 1.0e-128 464.5 467 53.5
EL10Ac3g07091 Beta vulgaris HOM05D005933 ORTHO05D007366 2.3e-128 463.4 487 53.6
Sed0001053 Sechium edule HOM05D005933 ORTHO05D007366 2.3e-128 463.4 470 54.5
Hund05286 Selenicereus undatus HOM05D005933 ORTHO05D007366 3.0e-128 463.0 400 59.8
Thhalv10025158m.g Eutrema salsugineum HOM05D005933 ORTHO05D007366 3.9e-128 462.6 477 52.2
AT4G35910 Arabidopsis thaliana HOM05D005933 ORTHO05D007366 5.1e-128 462.2 476 51.9
ECA236G1702 Erigeron canadensis HOM05D005933 ORTHO05D007366 6.7e-128 461.8 464 54.7
AL7G15130 Arabidopsis lyrata HOM05D005933 ORTHO05D007366 1.1e-127 461.1 476 51.1
unitig_749.g14146 Utricularia gibba HOM05D003650 ORTHO05D004213 2.5e-127 459.9 465 55.5
CAN.G128.8 Capsicum annuum HOM05D005933 ORTHO05D007366 3.3e-127 459.5 367 64.9
THA.LOC104811196 Tarenaya hassleriana HOM05D005933 ORTHO05D007366 3.3e-127 459.5 468 53.0
Eucgr.A02347 Eucalyptus grandis HOM05D005933 ORTHO05D007366 5.6e-127 458.8 472 53.4
CsaV3_3G039700 Cucumis sativus L. HOM05D005933 ORTHO05D007366 2.1e-126 456.8 471 52.9
PGR004G0721 Punica granatum HOM05D005933 ORTHO05D007366 3.6e-126 456.1 470 53.0
Aa31LG6G13690 Aethionema arabicum HOM05D005933 ORTHO05D007366 2.4e-125 453.4 479 49.9
DCAR_009061 Daucus carota HOM05D005933 ORTHO05D007366 5.3e-125 452.2 473 52.6
Carub.0007s0431 Capsella rubella HOM05D005933 ORTHO05D007366 6.9e-125 451.8 449 53.2
ClCG10G016640 Citrullus lanatus HOM05D005933 ORTHO05D007366 3.4e-124 449.5 496 51.8
A01p02040 Brassica napus HOM05D005933 ORTHO05D007366 5.5e-122 442.2 478 51.0
C01p02220 Brassica napus HOM05D005933 ORTHO05D007366 9.3e-122 441.4 478 50.8
TPR.G854 Trifolium pratense HOM05D005933 ORTHO05D007366 9.3e-122 441.4 386 58.0
BolC1t00214H Brassica oleracea HOM05D005933 ORTHO05D007366 2.7e-121 439.9 478 50.6
Atru.chr1.1098 Acer truncatum HOM05D005933 ORTHO05D007366 3.5e-121 439.5 406 57.1
BraA01t00193Z Brassica rapa HOM05D005933 ORTHO05D007366 3.9e-120 436.0 478 50.2
Aqoxy5G03564 Aquilegia oxysepala HOM05D005933 ORTHO05D007366 1.1e-119 434.5 463 51.8
Ah.13g075070 Amaranthus hybridus HOM05D005933 ORTHO05D007366 4.3e-119 432.6 459 51.4
AUR62024451 Chenopodium quinoa HOM05D005933 ORTHO05D007366 5.3e-117 425.6 515 48.7
VMungo1383G3081 Vigna mungo HOM05D005933 ORTHO05D007366 9.0e-117 424.9 569 43.4
PSO782G3339 Papaver somniferum HOM05D005933 ORTHO05D007366 2.0e-116 423.7 474 49.2
BcaNung03520 Brassica carinata HOM05D005933 ORTHO05D007366 2.6e-116 423.3 449 51.0
Oeu008914.1 Olea europaea HOM05D005933 ORTHO05D007366 5.5e-114 415.6 339 62.2
Oeu008916.1 Olea europaea HOM05D005933 ORTHO05D007366 5.5e-114 415.6 339 62.2
Hma1.2p1_2002F.1_g310770 Hydrangea macrophylla HOM05D005933 ORTHO05D007366 2.0e-108 397.1 336 61.0
Cfa008569 Carpinus fangiana HOM05D005933 ORTHO05D007366 1.4e-106 391.0 357 56.3
MBI16_g31719_MAGBIO Magnolia biondii HOM05D005933 ORTHO05D007366 6.1e-105 385.6 471 47.3
ATR0686G233 Amborella trichopoda HOM05D005933 ORTHO05D007366 2.2e-102 377.1 413 49.2
Prupe.7G060900 Prunus persica HOM05D005933 ORTHO05D007366 1.0e-99 368.2 334 54.2
Os12g0588900 Oryza sativa ssp. japonica HOM05D005933 ORTHO05D007366 2.3e-96 357.1 426 46.5
Sc13g0001740 Simmondsia chinensis HOM05D005933 ORTHO05D007366 1.3e-91 341.3 307 56.4
Zm00001eb135000 Zea mays HOM05D005933 ORTHO05D007366 4.2e-90 336.3 456 44.1
SEGI_18184 Sequoiadendron giganteum HOM05D005933 ORTHO05D007366 5.3e-85 319.3 470 40.2
SHI32975 Sapria himalayana HOM05D005933 ORTHO05D000023 3.6e-81 306.6 375 45.9
CDE09G0169 Ceratophyllum demersum HOM05D005933 ORTHO05D007366 1.5e-79 301.2 271 53.9
TAR633G2718 Trochodendron aralioides HOM05D005933 ORTHO05D007366 5.2e-72 276.2 234 59.8
BcaNung04276 Brassica carinata HOM05D005933 ORTHO05D007366 5.7e-71 272.7 413 42.9
HPP92_017763 Vanilla planifolia HOM05D005933 ORTHO05D007366 2.0e-68 264.2 326 45.4
Mapoly0165s0023 Marchantia polymorpha HOM05D005933 ORTHO05D007366 1.9e-66 257.7 463 35.2
AagrBONN_evm.TU.Sc2ySwM_117.299 Anthoceros agrestis HOM05D005933 ORTHO05D007366 9.5e-66 255.4 428 39.5
Glyma.19G139200 Glycine max HOM05D005933 ORTHO05D007366 6.1e-65 252.7 235 55.7
SMO145G0218 Selaginella moellendorffii HOM05D005933 ORTHO05D007366 6.8e-64 249.2 357 40.9
Rhsim03G0020400 Rhododendron simsii HOM05D005933 ORTHO05D007366 1.4e-53 214.9 234 53.4
Pp3c14_19420 Physcomitrium patens HOM05D005933 ORTHO05D007366 2.4e-53 214.2 270 42.2
Cfa017604 Carpinus fangiana HOM05D005933 ORTHO05D007366 6.6e-51 206.1 276 43.8
CDE02G1215 Ceratophyllum demersum HOM05D002948 ORTHO05D003577 9.2e-45 185.7 175 52.6
Cfa017749 Carpinus fangiana HOM05D005933 ORTHO05D007366 3.9e-43 180.3 231 46.3
CBR_g982 Chara braunii HOM05D005933 ORTHO05D007366 2.4e-37 161.0 432 28.2
C07p62070 Brassica napus HOM05D005933 ORTHO05D007366 5.4e-37 159.8 162 53.1
BolC7t46624H Brassica oleracea HOM05D005933 ORTHO05D007366 5.4e-37 159.8 162 53.1
Atru.chr1.1100 Acer truncatum HOM05D005933 ORTHO05D007366 1.2e-36 158.7 178 52.2
Cc06_g12380 Coffea canephora HOM05D005933 ORTHO05D007366 1.6e-36 158.3 185 50.3
TAR633G2604 Trochodendron aralioides HOM05D005933 ORTHO05D007366 6.4e-30 136.3 102 63.7
TAR636G2120 Trochodendron aralioides HOM05D005933 ORTHO05D007366 1.9e-26 124.8 118 52.5
Sc13g0001730 Simmondsia chinensis HOM05D005933 ORTHO05D007366 2.5e-26 124.4 130 52.3
MD12G1074100 Malus domestica HOM05D005933 ORTHO05D007366 7.3e-26 122.9 149 46.3
Dinv12483 Davidia involucrata HOM05D005933 ORTHO05D007366 2.9e-22 110.9 115 53.9
BcaNung03522 Brassica carinata HOM05D005933 ORTHO05D007366 6.4e-22 109.8 143 44.1
Nn8g40508 Nelumbo nucifera HOM05D005933 ORTHO05D007366 6.6e-19 99.8 67 67.2
Cre01.g043500 Chlamydomonas reinhardtii HOM05D005933 ORTHO05D007366 1.5e-18 98.6 169 36.1
Rhsim03G0024000 Rhododendron simsii HOM05D005933 ORTHO05D007366 6.0e-12 76.6 57 66.7
Rhsim03G0022600 Rhododendron simsii HOM05D005933 ORTHO05D007366 1.8e-11 75.1 57 64.9
PRCOL_00001836 Prasinoderma coloniale HOM05D005933 ORTHO05D007366 8.7e-11 72.8 299 27.1
SHI32976 Sapria himalayana HOM05D000105 ORTHO05D000023 4.3e-10 70.5 121 38.0
Nn8g40507 Nelumbo nucifera HOM05D005933 ORTHO05D007366 9.6e-10 69.3 81 46.9


User provided reference genes

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