Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold68G22978 Striga asiatica HOM05D003521 ORTHO05D000476 0.0e+00 1676.0 989 100.0
SGA_v2.0_scaffold4G02009 Striga asiatica HOM05D003521 ORTHO05D000476 0.0e+00 1333.2 995 80.8
Migut.D01015 Erythranthe guttata HOM05D003521 ORTHO05D000476 0.0e+00 1116.3 997 69.7
SalBow7G4780 Salvia bowleyana HOM05D003521 ORTHO05D000476 0.0e+00 1080.1 1018 67.1
Migut.I00939 Erythranthe guttata HOM05D003521 ORTHO05D000476 1.5e-309 1066.2 1027 66.7
MSTRG.22661 Avicennia marina HOM05D003521 ORTHO05D000476 3.0e-294 1015.4 993 67.1
Dinv30477 Davidia involucrata HOM05D003521 ORTHO05D000476 6.3e-284 981.1 1008 62.6
CSS0047293 Camellia sinensis var. sinensis HOM05D003521 ORTHO05D000476 1.6e-282 976.5 998 61.7
Nitab4.5_0010600g0010 Nicotiana tabacum HOM05D003521 ORTHO05D000476 2.9e-281 972.2 1052 59.7
Hma1.2p1_1195F.1_g265855 Hydrangea macrophylla HOM05D003521 ORTHO05D000476 5.5e-280 968.0 995 61.6
Nitab4.5_0000351g0100 Nicotiana tabacum HOM05D003521 ORTHO05D000476 4.8e-276 954.9 1034 59.2
Duzib160G0549 Durio zibethinus HOM05D003521 ORTHO05D000476 6.1e-271 937.9 1002 60.4
GSVIVG01038690001 Vitis vinifera HOM05D003521 ORTHO05D000476 1.3e-268 930.2 989 60.8
Eucgr.F03041 Eucalyptus grandis HOM05D003521 ORTHO05D000476 5.4e-267 924.9 1027 57.8
Thecc.06G092900 Theobroma cacao HOM05D003521 ORTHO05D000476 5.4e-267 924.9 1005 62.0
unitig_62.g23765 Utricularia gibba HOM05D003521 ORTHO05D000476 1.2e-266 923.7 986 61.0
RcHm_v2.0_Chr2g0139071 Rosa chinensis HOM05D003521 ORTHO05D000476 1.6e-266 923.3 1045 58.4
TAR626G0208 Trochodendron aralioides HOM05D003521 ORTHO05D000476 5.9e-266 921.4 999 60.5
QL05p021582 Quercus lobata HOM05D003521 ORTHO05D000476 2.9e-265 919.1 1019 59.2
Prupe.3G066400 Prunus persica HOM05D003521 ORTHO05D000476 8.6e-265 917.5 1003 62.4
THA.LOC104812525 Tarenaya hassleriana HOM05D003521 ORTHO05D000476 8.6e-265 917.5 1011 60.2
Peaxi162Scf00207g01030 Petunia axillaris HOM05D003521 ORTHO05D000476 1.9e-264 916.4 1025 58.0
CSS0015824 Camellia sinensis var. sinensis HOM05D003521 ORTHO05D000476 4.2e-264 915.2 1004 59.0
Cc04_g03000 Coffea canephora HOM05D003521 ORTHO05D000476 7.2e-264 914.4 1005 61.2
CiPaw.02G148500 Carya illinoinensis HOM05D003521 ORTHO05D000476 1.0e-262 910.6 1039 57.1
Thhalv10018077m.g Eutrema salsugineum HOM05D003521 ORTHO05D000476 1.4e-262 910.2 989 58.8
Duzib235G1126 Durio zibethinus HOM05D003521 ORTHO05D000476 2.6e-261 906.0 1009 58.9
Aqoxy7G01582 Aquilegia oxysepala HOM05D003521 ORTHO05D000476 4.4e-261 905.2 997 60.3
Actinidia21685 Actinidia chinensis HOM05D003521 ORTHO05D000476 5.7e-261 904.8 1020 58.2
AT1G79830 Arabidopsis thaliana HOM05D003521 ORTHO05D000476 5.4e-259 898.3 996 57.4
Sopen06g024880 Solanum pennellii HOM05D003521 ORTHO05D000476 4.5e-258 895.2 1048 57.7
Rhsim08G0223900 Rhododendron simsii HOM05D003521 ORTHO05D000476 7.8e-258 894.4 1018 57.1
AL2G41720 Arabidopsis lyrata HOM05D003521 ORTHO05D000476 1.9e-256 889.8 996 57.8
VMungo1080G0951 Vigna mungo HOM05D003521 ORTHO05D000476 2.5e-256 889.4 1021 57.1
Dinv38015 Davidia involucrata HOM05D003521 ORTHO05D000476 4.3e-256 888.6 738 71.8
Lalb_Chr14g0373191 Lupinus albus HOM05D003521 ORTHO05D000476 1.6e-255 886.7 1036 56.7
Potri.003G052100 Populus trichocarpa HOM05D003521 ORTHO05D000476 2.8e-255 885.9 1007 57.9
Lalb_Chr24g0395951 Lupinus albus HOM05D003521 ORTHO05D000476 3.6e-255 885.6 1026 57.0
Atru.chr1.3345 Acer truncatum HOM05D003521 ORTHO05D000476 4.7e-255 885.2 1001 59.3
HanXRQChr10g0313461 Helianthus annuus HOM05D003521 ORTHO05D000476 1.2e-253 880.6 990 57.2
FAN02G3342 Fragaria x ananassa HOM05D003521 ORTHO05D000476 2.0e-253 879.8 1073 54.9
Gohir.A10G081600 Gossypium hirsutum HOM05D003521 ORTHO05D000476 2.6e-253 879.4 994 58.8
Sp5g35930 Schrenkiella parvula HOM05D003521 ORTHO05D000476 5.8e-253 878.2 987 59.4
Ciclev10024803m.g Citrus clementina HOM05D003521 ORTHO05D000476 2.9e-252 875.9 996 57.8
TAR383G0706 Trochodendron aralioides HOM05D003521 ORTHO05D000476 2.9e-252 875.9 990 58.3
CARHR143590 Cardamine hirsuta HOM05D003521 ORTHO05D000476 3.7e-252 875.5 986 57.0
AUR62011668 Chenopodium quinoa HOM05D003521 ORTHO05D000476 8.3e-252 874.4 1006 56.5
Gohir.D10G069800 Gossypium hirsutum HOM05D003521 ORTHO05D000476 1.4e-251 873.6 982 59.1
Lj3g0009081 Lotus japonicus HOM05D003521 ORTHO05D000476 1.4e-251 873.6 1036 55.8
Solyc06g066610.4 Solanum lycopersicum HOM05D003521 ORTHO05D000476 1.8e-251 873.2 1048 57.0
CiPaw.01G235400 Carya illinoinensis HOM05D003521 ORTHO05D000476 5.4e-251 871.7 1013 56.5
Nn3g18099 Nelumbo nucifera HOM05D003521 ORTHO05D000476 5.4e-251 871.7 993 57.4
Lj9C509G5 Lonicera japonica HOM05D003521 ORTHO05D000476 7.0e-251 871.3 1066 55.9
Gorai.011G074100 Gossypium raimondii HOM05D003521 ORTHO05D000476 9.2e-251 870.9 991 58.5
MELO3C023279.2 Cucumis melo HOM05D003521 ORTHO05D000476 1.2e-250 870.5 1029 57.7
Phvul.005G169100 Phaseolus vulgaris HOM05D003521 ORTHO05D000476 7.8e-250 867.8 1019 56.3
FAN05G3380 Fragaria x ananassa HOM05D003521 ORTHO05D000476 1.7e-249 866.7 1062 55.1
Gohir.A05G132400 Gossypium hirsutum HOM05D003521 ORTHO05D000476 1.7e-249 866.7 998 58.9
Carub.0002s2767 Capsella rubella HOM05D003521 ORTHO05D000476 2.3e-249 866.3 981 58.1
Gorai.009G135200 Gossypium raimondii HOM05D003521 ORTHO05D000476 3.0e-249 865.9 991 59.0
Gohir.D05G131500 Gossypium hirsutum HOM05D003521 ORTHO05D000476 5.0e-249 865.1 1000 57.9
CAN.G1152.8 Capsicum annuum HOM05D003521 ORTHO05D000476 6.6e-249 864.8 1059 55.6
FvH4_6g31822 Fragaria vesca HOM05D003521 ORTHO05D000476 1.1e-248 864.0 1056 54.7
MD09G1208900 Malus domestica HOM05D003521 ORTHO05D000476 1.1e-248 864.0 1009 57.2
FAN14G2596 Fragaria x ananassa HOM05D003521 ORTHO05D000476 3.3e-248 862.4 1038 55.6
TWI12G1038 Tripterygium wilfordii HOM05D003521 ORTHO05D000476 7.3e-248 861.3 997 56.7
Nn2g11676 Nelumbo nucifera HOM05D003521 ORTHO05D000476 2.1e-247 859.8 1015 55.7
BolC6t38043H Brassica oleracea HOM05D003521 ORTHO05D000476 2.3e-246 856.3 985 56.0
ClCG02G000820 Citrullus lanatus HOM05D003521 ORTHO05D000476 5.2e-246 855.1 1036 56.7
C06p28740 Brassica napus HOM05D003521 ORTHO05D000476 6.8e-246 854.7 981 56.0
BraA07t30279Z Brassica rapa HOM05D003521 ORTHO05D000476 1.5e-245 853.6 988 57.6
PGR102G1144 Punica granatum HOM05D003521 ORTHO05D000476 2.0e-245 853.2 1004 56.4
TWI18G0852 Tripterygium wilfordii HOM05D003521 ORTHO05D000476 2.0e-245 853.2 1002 56.6
Manes.11G037600 Manihot esculenta HOM05D003521 ORTHO05D000476 5.8e-245 851.7 1010 58.4
CANSAT56G3073 Cannabis sativa HOM05D003521 ORTHO05D000476 2.2e-244 849.7 1009 55.0
vmacro18884 Vaccinium macrocarpon HOM05D003521 ORTHO05D000476 2.9e-244 849.4 1044 54.9
Lsat_1_v5_gn_1_35300 Lactuca sativa HOM05D003521 ORTHO05D000476 1.1e-243 847.4 1002 57.8
ECA247G0039 Erigeron canadensis HOM05D003521 ORTHO05D000476 2.4e-243 846.3 1028 55.5
Hund00648 Selenicereus undatus HOM05D003521 ORTHO05D000476 3.2e-243 845.9 1042 55.9
HanXRQChr04g0096181 Helianthus annuus HOM05D003521 ORTHO05D000476 4.1e-243 845.5 1010 57.8
A07p26350 Brassica napus HOM05D003521 ORTHO05D000476 5.4e-243 845.1 983 56.4
Sc18g0003130 Simmondsia chinensis HOM05D003521 ORTHO05D000476 5.4e-243 845.1 1013 57.2
Haze_16353 Corylus avellana HOM05D003521 ORTHO05D000476 1.2e-242 844.0 1165 50.7
PSO386G0042 Papaver somniferum HOM05D003521 ORTHO05D000476 1.2e-242 844.0 1008 57.0
Ca_01135_v3 Cicer arietinum L. HOM05D003521 ORTHO05D000476 2.7e-242 842.8 1038 55.0
Aa31LG4G110 Aethionema arabicum HOM05D003521 ORTHO05D000476 4.6e-242 842.0 1022 55.0
Sed0014905 Sechium edule HOM05D003521 ORTHO05D000476 1.3e-241 840.5 1027 56.2
Glyma.15G016700 Glycine max HOM05D003521 ORTHO05D000476 3.9e-241 839.0 1024 54.3
Potri.001G185050 Populus trichocarpa HOM05D003521 ORTHO05D000476 1.9e-240 836.6 1008 55.3
MD17G1190500 Malus domestica HOM05D003521 ORTHO05D000476 5.6e-240 835.1 1005 57.7
Sed0003107 Sechium edule HOM05D003521 ORTHO05D000476 7.3e-240 834.7 1035 55.4
AUR62016491 Chenopodium quinoa HOM05D003521 ORTHO05D000476 2.1e-239 833.2 1009 54.4
Medtr2g101700 Medicago truncatula HOM05D003521 ORTHO05D000476 2.8e-239 832.8 1019 54.0
PSO210G6795 Papaver somniferum HOM05D003521 ORTHO05D000476 3.6e-239 832.4 1029 56.7
COL.COLO4_30440 Corchorus olitorius HOM05D003521 ORTHO05D000476 3.1e-238 829.3 993 57.4
ECA234G0658 Erigeron canadensis HOM05D003521 ORTHO05D000476 1.5e-237 827.0 1002 57.6
CsaV3_2G017940 Cucumis sativus L. HOM05D003521 ORTHO05D000476 1.4e-235 820.5 1031 56.0
DCAR_016209 Daucus carota HOM05D003521 ORTHO05D000476 1.9e-235 820.1 994 56.1
Sabra03G0027000 Salix brachista HOM05D003521 ORTHO05D000476 1.0e-233 814.3 1053 53.8
arahy.Tifrunner.gnm1.ann1.ZR40ID Arachis hypogaea HOM05D003521 ORTHO05D000476 1.7e-233 813.5 1020 53.1
arahy.Tifrunner.gnm1.ann1.A5WQDM Arachis hypogaea HOM05D003521 ORTHO05D000476 5.6e-232 808.5 1136 49.8
Psat5g297520 Pisum sativum HOM05D003521 ORTHO05D000476 2.1e-231 806.6 1041 52.8
EL10Ac9g22035 Beta vulgaris HOM05D003521 ORTHO05D000476 1.4e-230 803.9 979 54.4
Glyma.13G356900 Glycine max HOM05D003521 ORTHO05D000476 1.4e-230 803.9 1029 53.3
HanXRQChr12g0360801 Helianthus annuus HOM05D003521 ORTHO05D000476 1.8e-230 803.5 991 55.1
arahy.Tifrunner.gnm1.ann1.60NISA Arachis hypogaea HOM05D003521 ORTHO05D000476 1.6e-226 790.4 1154 49.1
Lsat_1_v5_gn_5_130960 Lactuca sativa HOM05D003521 ORTHO05D000476 2.1e-226 790.0 991 54.1
Hund06634 Selenicereus undatus HOM05D003521 ORTHO05D000476 1.4e-222 777.3 1035 52.4
Sabra01G0155200 Salix brachista HOM05D003521 ORTHO05D000476 1.8e-222 776.9 1009 54.4
Lalb_Chr04g0262811 Lupinus albus HOM05D003521 ORTHO05D000476 9.9e-221 771.2 1036 51.2
ATR0315G089 Amborella trichopoda HOM05D003521 ORTHO05D000476 3.8e-220 769.2 1008 53.1
CDE02G1875 Ceratophyllum demersum HOM05D003521 ORTHO05D000476 1.1e-219 767.7 1000 53.1
Actinidia24741 Actinidia chinensis HOM05D003521 ORTHO05D000476 5.6e-216 755.4 992 52.8
Os05g0559900 Oryza sativa ssp. japonica HOM05D003521 ORTHO05D000476 1.2e-210 737.6 1061 50.1
Zm00001eb295600 Zea mays HOM05D003521 ORTHO05D000476 1.1e-206 724.5 1048 48.5
arahy.Tifrunner.gnm1.ann1.M6JGC2 Arachis hypogaea HOM05D003521 ORTHO05D000476 4.3e-200 702.6 1023 50.0
Lj5C57T13 Lonicera japonica HOM05D003521 ORTHO05D000476 1.6e-194 684.1 1031 49.3
ECA232G1585 Erigeron canadensis HOM05D003521 ORTHO05D000142 1.1e-184 651.4 1001 47.2
SHI10997 Sapria himalayana HOM05D003521 ORTHO05D000476 3.1e-182 643.3 1094 43.3
HanXRQChr16g0500841 Helianthus annuus HOM05D003521 ORTHO05D000476 1.5e-173 614.4 920 49.0
Cpa.g.sc1513.1 Carica papaya HOM05D003521 ORTHO05D000476 1.4e-171 607.8 482 76.1
Mapoly0013s0180 Marchantia polymorpha HOM05D003521 ORTHO05D000476 4.8e-167 592.8 1017 44.0
Pp3c12_5050 Physcomitrium patens HOM05D003521 ORTHO05D000476 1.5e-155 554.7 1014 42.0
HPP92_003835 Vanilla planifolia HOM05D003521 ORTHO05D000476 2.8e-151 540.4 549 65.8
CDE08G0748 Ceratophyllum demersum HOM05D003521 ORTHO05D000476 6.3e-151 539.3 797 49.4
AagrBONN_evm.TU.Sc2ySwM_344.1927 Anthoceros agrestis HOM05D003521 ORTHO05D000476 1.9e-147 527.7 684 52.8
Pp3c4_15860 Physcomitrium patens HOM05D003521 ORTHO05D000476 9.8e-128 462.2 748 44.9
Zm00001eb343520 Zea mays HOM05D003521 ORTHO05D000476 1.0e-108 399.1 403 60.5
CBR_g16051 Chara braunii HOM05D003521 ORTHO05D000476 5.1e-108 396.7 1026 34.1
Oeu024073.1 Olea europaea HOM05D003521 ORTHO05D000476 2.3e-92 344.7 529 47.3
unitig_46.g18558 Utricularia gibba HOM05D003521 ORTHO05D000476 2.4e-73 281.6 425 46.4
CAN.G395.28 Capsicum annuum HOM05D003521 ORTHO05D000476 1.5e-54 219.2 346 47.7
Oeu024072.1 Olea europaea HOM05D003521 ORTHO05D000476 6.3e-50 203.8 394 40.6
Lsat_1_v5_gn_4_102620 Lactuca sativa HOM05D003521 ORTHO05D000476 2.6e-48 198.4 157 73.2
CDE08G0544 Ceratophyllum demersum HOM05D003521 ORTHO05D000476 3.8e-47 194.5 202 59.4
Cre03.g187000 Chlamydomonas reinhardtii HOM05D003521 ORTHO05D000476 1.9e-46 192.2 319 42.3
TPR.G5155 Trifolium pratense HOM05D003521 ORTHO05D000476 1.0e-44 186.4 137 78.1
Ca_01143_v3 Cicer arietinum L. HOM05D003521 ORTHO05D000476 2.3e-44 185.3 315 45.7
PRCOL_00000677 Prasinoderma coloniale HOM05D003521 ORTHO05D000476 3.1e-41 174.9 646 30.7
Zm00001eb343530 Zea mays HOM05D003521 ORTHO05D000476 6.1e-37 160.6 519 32.6
CAN.G135.35 Capsicum annuum HOM05D003521 ORTHO05D000476 9.8e-35 153.3 191 52.4
SMO298G0028 Selaginella moellendorffii HOM05D003521 ORTHO05D000476 2.2e-34 152.1 364 37.1
Cpa.g.c29821 Carica papaya HOM05D003521 ORTHO05D000476 7.7e-32 143.7 90 88.9
Lsat_1_v5_gn_4_178240 Lactuca sativa HOM05D003521 ORTHO05D000476 1.3e-31 142.9 150 62.0
Cpa.g.c33209.1 Carica papaya HOM05D003521 ORTHO05D000476 2.9e-31 141.7 408 36.3
SEGI_27505 Sequoiadendron giganteum HOM05D003521 ORTHO05D000476 5.5e-30 137.5 459 30.5
Ca_25389_v3 Cicer arietinum L. HOM05D003521 ORTHO05D000476 7.2e-30 137.1 243 44.0
Lsat_1_v5_gn_4_102580 Lactuca sativa HOM05D003521 ORTHO05D000476 2.3e-28 132.1 457 31.5
MELO3C034685.2 Cucumis melo HOM05D003521 ORTHO05D000476 6.8e-28 130.6 88 77.3
HanXRQChr16g0500831 Helianthus annuus HOM05D003521 ORTHO05D000476 6.8e-28 130.6 87 81.6
Dinv38016 Davidia involucrata HOM05D003521 ORTHO05D000476 4.4e-27 127.9 117 65.0
CBR_g37651 Chara braunii HOM05D003521 ORTHO05D000476 5.7e-27 127.5 688 25.6
CARHR143550 Cardamine hirsuta HOM05D003521 ORTHO05D000476 1.1e-25 123.2 218 42.7
Actinidia32725 Actinidia chinensis HOM05D003521 ORTHO05D000476 5.4e-25 120.9 108 64.8
MCO14G500 Micromonas commoda HOM05D003521 ORTHO05D000476 5.4e-25 120.9 583 28.1
arahy.Tifrunner.gnm1.ann1.J2PPD0 Arachis hypogaea HOM05D003521 ORTHO05D000476 5.9e-24 117.5 99 69.7
Mapoly0111s0038 Marchantia polymorpha HOM05D003521 ORTHO05D000476 2.3e-23 115.5 645 26.4
Ca_31247_v3 Cicer arietinum L. HOM05D003521 ORTHO05D000476 1.1e-22 113.2 79 77.2
AagrBONN_evm.TU.Sc2ySwM_344.1934 Anthoceros agrestis HOM05D003521 ORTHO05D000476 3.3e-22 111.7 358 31.6
Medtr2g043010 Medicago truncatula HOM05D003521 ORTHO05D000476 4.7e-21 107.8 138 53.6
TPR.G19044 Trifolium pratense HOM05D003521 ORTHO05D000476 1.0e-20 106.7 96 64.6
arahy.Tifrunner.gnm1.ann1.SA7FDN Arachis hypogaea HOM05D003521 ORTHO05D000476 4.0e-20 104.8 63 87.3
HanXRQChr11g0325911 Helianthus annuus HOM05D003521 ORTHO05D000476 1.2e-16 93.2 84 61.9
Lsat_1_v5_gn_4_102600 Lactuca sativa HOM05D003521 ORTHO05D000476 1.6e-16 92.8 74 70.3
Lsat_1_v5_gn_2_62580 Lactuca sativa HOM05D003521 ORTHO05D000476 4.6e-16 91.3 60 86.7
unitig_52.g17085 Utricularia gibba HOM05D003521 ORTHO05D000476 1.3e-15 89.7 244 37.3
Ca_25015_v3 Cicer arietinum L. HOM05D003521 ORTHO05D000476 1.7e-15 89.4 88 60.2
BolC1t05061H Brassica oleracea HOM05D003521 ORTHO05D000476 6.6e-15 87.4 75 65.3
TPR.G7293 Trifolium pratense HOM05D003521 ORTHO05D000476 1.1e-14 86.7 118 51.7
PSO596G0006 Papaver somniferum HOM05D003521 ORTHO05D000476 9.5e-14 83.6 59 76.3
PSO596G0043 Papaver somniferum HOM05D003521 ORTHO05D000476 9.5e-14 83.6 59 76.3
Thecc.08G046800 Theobroma cacao HOM05D003521 ORTHO05D000476 2.3e-12 79.0 71 64.8
CARHR212390 Cardamine hirsuta HOM05D003521 ORTHO05D000476 6.8e-12 77.4 97 52.6
Ca_16259_v3 Cicer arietinum L. HOM05D001034 ORTHO05D000476 6.8e-12 77.4 74 63.5
C09p10740 Brassica napus HOM05D003521 ORTHO05D000476 2.6e-11 75.5 75 60.0
Ca_25011_v3 Cicer arietinum L. HOM05D010632 ORTHO05D000013 3.5e-08 65.1 47 70.2
MBI19_g34543_MAGBIO Magnolia biondii HOM05D003521 ORTHO05D000476 6.0e-08 64.3 43 76.7
HanXRQChr01g0011031 Helianthus annuus HOM05D003521 ORTHO05D000476 1.0e-07 63.5 45 73.3
unitig_52.g17084 Utricularia gibba HOM05D003521 ORTHO05D000476 3.3e-06 58.5 46 67.4
Cfa026401 Carpinus fangiana HOM05D003521 ORTHO05D000476 5.6e-06 57.8 790 22.7


User provided reference genes

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