Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold61G21170 Striga asiatica HOM05D009140 ORTHO05D010215 4.2e-124 448.0 215 100.0
SGA_v2.0_scaffold67G22642 Striga asiatica HOM05D000407 ORTHO05D000004 1.7e-53 213.4 244 48.0
SGA_v2.0_scaffold36G14413 Striga asiatica HOM05D000003 ORTHO05D011213 8.6e-29 131.3 216 35.6
SGA_v2.0_scaffold151G36755 Striga asiatica HOM05D000003 ORTHO05D000004 2.1e-27 126.7 237 32.5
SGA_v2.0_scaffold17G08173 Striga asiatica HOM05D000003 ORTHO05D000004 1.1e-26 124.4 241 30.3
SGA_v2.0_scaffold259G45819 Striga asiatica HOM05D000003 ORTHO05D000004 6.9e-26 121.7 151 41.7
SGA_v2.0_scaffold26G11238 Striga asiatica HOM05D008147 ORTHO05D010215 5.8e-25 118.6 174 36.2
SGA_v2.0_scaffold53G19333 Striga asiatica HOM05D009140 ORTHO05D010636 2.2e-24 116.7 168 36.3
SGA_v2.0_scaffold2392G54112 Striga asiatica HOM05D000003 ORTHO05D000006 1.1e-23 114.4 202 35.6
SGA_v2.0_scaffold38G15008 Striga asiatica HOM05D000429 ORTHO05D021023 5.4e-23 112.1 142 40.1
SGA_v2.0_scaffold6G03466 Striga asiatica HOM05D000003 ORTHO05D000004 1.2e-22 110.9 174 32.2
SGA_v2.0_scaffold81G26044 Striga asiatica HOM05D000123 ORTHO05D000004 8.7e-21 104.8 161 36.0
SGA_v2.0_scaffold12G06017 Striga asiatica HOM05D009140 ORTHO05D010636 1.5e-20 104.0 122 42.6
SGA_v2.0_scaffold215G42323 Striga asiatica HOM05D008147 ORTHO05D010215 1.9e-20 103.6 184 31.5
SGA_v2.0_scaffold250G45022 Striga asiatica HOM05D000003 ORTHO05D000004 1.9e-20 103.6 241 27.4
SGA_v2.0_scaffold14G07070 Striga asiatica HOM05D000003 ORTHO05D000004 1.3e-19 100.9 236 25.8
SGA_v2.0_scaffold134G34731 Striga asiatica HOM05D009140 ORTHO05D000004 1.6e-19 100.5 112 43.8
SGA_v2.0_scaffold23G10153 Striga asiatica HOM05D003836 ORTHO05D004556 4.8e-19 99.0 113 43.4
SGA_v2.0_scaffold55G19740 Striga asiatica HOM05D000003 ORTHO05D000004 8.1e-19 98.2 79 58.2
SGA_v2.0_scaffold11G05791 Striga asiatica HOM05D000563 ORTHO05D000536 2.4e-18 96.7 173 28.9
SGA_v2.0_scaffold102G29891 Striga asiatica HOM05D003766 ORTHO05D004607 9.0e-18 94.7 153 34.6
SGA_v2.0_scaffold122G33296 Striga asiatica HOM05D000003 ORTHO05D000004 2.0e-17 93.6 249 26.5
SGA_v2.0_scaffold23G10019 Striga asiatica HOM05D000003 ORTHO05D000004 3.4e-17 92.8 138 37.0
SGA_v2.0_scaffold118G32446 Striga asiatica HOM05D000003 ORTHO05D000004 5.8e-17 92.0 150 35.3
SGA_v2.0_scaffold93G28364 Striga asiatica HOM05D009140 ORTHO05D010636 1.7e-16 90.5 175 32.0
SGA_v2.0_scaffold127G33968 Striga asiatica HOM05D009140 ORTHO05D000004 2.2e-16 90.1 112 40.2
SGA_v2.0_scaffold279G46783 Striga asiatica HOM05D005209 ORTHO05D006188 7.1e-15 85.1 180 26.7
SGA_v2.0_scaffold61G21225 Striga asiatica HOM05D000003 ORTHO05D000006 6.0e-14 82.0 106 39.6
SGA_v2.0_scaffold104G30166 Striga asiatica HOM05D000003 ORTHO05D000004 1.3e-13 80.9 151 35.8
SGA_v2.0_scaffold16G07708 Striga asiatica HOM05D004030 ORTHO05D004952 3.9e-13 79.3 200 26.0
SGA_v2.0_scaffold17G08062 Striga asiatica HOM05D000003 ORTHO05D000006 6.7e-13 78.6 236 25.0
SGA_v2.0_scaffold380G50369 Striga asiatica HOM05D010565 ORTHO05D011213 6.7e-13 78.6 198 23.2
SGA_v2.0_scaffold4G02180 Striga asiatica HOM05D000688 ORTHO05D004737 1.9e-12 77.0 188 25.5
SGA_v2.0_scaffold40G15459 Striga asiatica HOM05D000090 ORTHO05D000083 2.5e-12 76.6 121 35.5
SGA_v2.0_scaffold244G44341 Striga asiatica HOM05D000003 ORTHO05D000004 4.3e-12 75.9 148 33.1
SGA_v2.0_scaffold246G44809 Striga asiatica HOM05D000003 ORTHO05D000004 4.3e-12 75.9 132 28.8
SGA_v2.0_scaffold66G22256 Striga asiatica HOM05D000003 ORTHO05D000004 4.3e-12 75.9 151 29.1
SGA_v2.0_scaffold54G19606 Striga asiatica HOM05D009140 ORTHO05D010215 7.4e-12 75.1 112 36.6
SGA_v2.0_scaffold191G40465 Striga asiatica HOM05D010565 ORTHO05D011213 9.6e-12 74.7 147 32.7
SGA_v2.0_scaffold132G34546 Striga asiatica HOM05D010565 ORTHO05D011213 1.3e-11 74.3 140 31.4
SGA_v2.0_scaffold382G50402 Striga asiatica HOM05D000003 ORTHO05D000004 1.3e-11 74.3 133 27.8
SGA_v2.0_scaffold43G16501 Striga asiatica HOM05D000007 ORTHO05D021020 6.2e-11 72.0 125 32.8
SGA_v2.0_scaffold191G40503 Striga asiatica HOM05D000003 ORTHO05D000004 8.1e-11 71.6 215 25.6
Cc08_g06220 Coffea canephora HOM05D000003 ORTHO05D000004 1.1e-10 71.2 240 24.2
SGA_v2.0_scaffold5G02882 Striga asiatica HOM05D001043 ORTHO05D001555 1.8e-10 70.5 163 25.8
SGA_v2.0_scaffold76G25079 Striga asiatica HOM05D009140 ORTHO05D000004 9.0e-10 68.2 111 33.3
SGA_v2.0_scaffold212G42204 Striga asiatica HOM05D009140 ORTHO05D011213 1.2e-09 67.8 127 37.8
SGA_v2.0_scaffold65G22183 Striga asiatica HOM05D009140 ORTHO05D010215 1.2e-09 67.8 59 49.2
SGA_v2.0_scaffold71G23744 Striga asiatica HOM05D004014 ORTHO05D005890 1.5e-09 67.4 211 23.7
SGA_v2.0_scaffold67G22785 Striga asiatica HOM05D010565 ORTHO05D011213 2.0e-09 67.0 142 26.1
SGA_v2.0_scaffold10G05079 Striga asiatica HOM05D000003 ORTHO05D000004 3.4e-09 66.2 208 25.5
SGA_v2.0_scaffold127G33986 Striga asiatica HOM05D009140 ORTHO05D000004 3.4e-09 66.2 107 37.4
SGA_v2.0_scaffold43G16397 Striga asiatica HOM05D009140 ORTHO05D010215 9.9e-09 64.7 130 30.8
BcaB05g22054 Brassica carinata HOM05D000003 ORTHO05D001498 1.3e-08 64.3 159 25.8
Rhsim01G0076000 Rhododendron simsii HOM05D000003 ORTHO05D000004 1.3e-08 64.3 161 27.3
SGA_v2.0_scaffold299G47717 Striga asiatica HOM05D000003 ORTHO05D000004 1.7e-08 63.9 118 28.8
SGA_v2.0_scaffold61G21264 Striga asiatica HOM05D017438 ORTHO05D000004 2.2e-08 63.5 128 30.5
FvH4_6g33631 Fragaria vesca HOM05D000003 ORTHO05D004145 2.9e-08 63.2 163 28.8
Lj1P164T10 Lonicera japonica HOM05D000003 ORTHO05D000004 2.9e-08 63.2 158 25.3
SGA_v2.0_scaffold140G35468 Striga asiatica HOM05D023911 ORTHO05D011213 2.9e-08 63.2 140 27.9
Cc11_g12030 Coffea canephora HOM05D000003 ORTHO05D000004 6.4e-08 62.0 238 21.8
Rhsim11G0146500 Rhododendron simsii HOM05D000003 ORTHO05D000004 6.4e-08 62.0 154 29.9
RhsimUnG0010200 Rhododendron simsii HOM05D000003 ORTHO05D000004 6.4e-08 62.0 172 25.6
CANSAT25G1387 Cannabis sativa HOM05D000003 ORTHO05D000004 8.4e-08 61.6 162 25.3
SGA_v2.0_scaffold117G32363 Striga asiatica HOM05D009140 ORTHO05D010215 1.4e-07 60.8 68 42.6
SGA_v2.0_scaffold163G37969 Striga asiatica HOM05D000003 ORTHO05D000004 1.4e-07 60.8 151 31.8
SGA_v2.0_scaffold46G17370 Striga asiatica HOM05D023911 ORTHO05D011213 1.4e-07 60.8 78 32.1
BcaB05g24950 Brassica carinata HOM05D000003 ORTHO05D000004 1.9e-07 60.5 175 28.0
TWI31G0724 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 1.9e-07 60.5 166 25.3
CiPaw.14G039600 Carya illinoinensis HOM05D000003 ORTHO05D000004 2.4e-07 60.1 215 24.2
BcaC06g36253 Brassica carinata HOM05D000496 ORTHO05D000411 3.2e-07 59.7 174 26.4
BolC1t02319H Brassica oleracea HOM05D000003 ORTHO05D000004 3.2e-07 59.7 172 26.7
CANSAT25G2465 Cannabis sativa HOM05D000003 ORTHO05D000167 3.2e-07 59.7 163 25.8
Rhsim01G0174200 Rhododendron simsii HOM05D000003 ORTHO05D000004 3.2e-07 59.7 154 28.6
SGA_v2.0_scaffold4G01975 Striga asiatica HOM05D010565 ORTHO05D011213 3.2e-07 59.7 148 25.7
BcaC04g23534 Brassica carinata HOM05D000003 ORTHO05D000411 4.2e-07 59.3 180 28.3
CANSAT64G0950 Cannabis sativa HOM05D000003 ORTHO05D000167 4.2e-07 59.3 166 26.5
AUR62015281 Chenopodium quinoa HOM05D000003 ORTHO05D000004 5.5e-07 58.9 149 28.9
SGA_v2.0_scaffold10G05484 Striga asiatica HOM05D010565 ORTHO05D011213 5.5e-07 58.9 145 28.3
TPR.G36801 Trifolium pratense HOM05D000003 ORTHO05D000004 7.1e-07 58.5 160 28.8
BcaB01g01579 Brassica carinata HOM05D000003 ORTHO05D001498 1.2e-06 57.8 174 25.9
SGA_v2.0_scaffold17G08016 Striga asiatica HOM05D009140 ORTHO05D010215 1.2e-06 57.8 59 45.8
SGA_v2.0_scaffold254G45257 Striga asiatica HOM05D005881 ORTHO05D007298 1.2e-06 57.8 75 38.7
Aa31LG1G9570 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.6e-06 57.4 152 27.0
BcaB04g17941 Brassica carinata HOM05D000003 ORTHO05D000004 1.6e-06 57.4 162 25.3
Cc04_g14660 Coffea canephora HOM05D000003 ORTHO05D000167 1.6e-06 57.4 128 28.1
CANSAT21G2476 Cannabis sativa HOM05D000003 ORTHO05D000004 2.1e-06 57.0 166 29.5
CANSAT54G2762 Cannabis sativa HOM05D000003 ORTHO05D000004 2.1e-06 57.0 162 24.7
CANSAT64G0247 Cannabis sativa HOM05D000003 ORTHO05D000004 2.1e-06 57.0 162 25.3
Aa31LG11G8620 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.7e-06 56.6 200 24.5
CANSAT01G2533 Cannabis sativa HOM05D000003 ORTHO05D000167 2.7e-06 56.6 161 30.4
QL02p021095 Quercus lobata HOM05D000003 ORTHO05D000004 2.7e-06 56.6 179 24.0
QL05p065428 Quercus lobata HOM05D000003 ORTHO05D000004 2.7e-06 56.6 162 26.5
SGA_v2.0_scaffold335G49110 Striga asiatica HOM05D001364 ORTHO05D001316 2.7e-06 56.6 152 28.9
Aa31LG1G4840 Aethionema arabicum HOM05D000003 ORTHO05D000004 4.6e-06 55.8 162 24.7
Aa31sc210G10 Aethionema arabicum HOM05D000003 ORTHO05D000004 4.6e-06 55.8 163 25.2
BcaB04g17562 Brassica carinata HOM05D000003 ORTHO05D001498 4.6e-06 55.8 162 26.5
BolC6t37477H Brassica oleracea HOM05D000003 ORTHO05D001498 4.6e-06 55.8 163 26.4
BraA03t14820Z Brassica rapa HOM05D000003 ORTHO05D000004 4.6e-06 55.8 156 25.6
CiPaw.15G073500 Carya illinoinensis HOM05D000003 ORTHO05D000004 4.6e-06 55.8 192 23.4
Lj6P383T11 Lonicera japonica HOM05D000003 ORTHO05D000004 4.6e-06 55.8 155 26.5
Lju897C2T1 Lonicera japonica HOM05D000003 ORTHO05D000126 4.6e-06 55.8 141 24.8
FvH4_1g28812 Fragaria vesca HOM05D000003 ORTHO05D000004 6.0e-06 55.5 146 28.1
QL09p015564 Quercus lobata HOM05D000003 ORTHO05D000004 6.0e-06 55.5 188 26.1
SGA_v2.0_scaffold125G33753 Striga asiatica HOM05D008147 ORTHO05D010636 6.0e-06 55.5 70 35.7
SGA_v2.0_scaffold349G49619 Striga asiatica HOM05D008147 ORTHO05D010215 6.0e-06 55.5 71 35.2
Aa31sc180G30 Aethionema arabicum HOM05D000003 ORTHO05D000004 7.9e-06 55.1 160 23.1
QL12p025805 Quercus lobata HOM05D000967 ORTHO05D000796 7.9e-06 55.1 154 26.6


User provided reference genes

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