Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold58G20396 Striga asiatica HOM05D002149 ORTHO05D002154 5.0e-63 244.2 117 100.0
Hund21246 Selenicereus undatus HOM05D002149 ORTHO05D002154 5.2e-12 74.7 115 34.8
Atru.chr10.1943 Acer truncatum HOM05D002149 ORTHO05D002154 1.4e-09 66.6 129 32.6
SalBow7G4808 Salvia bowleyana HOM05D002149 ORTHO05D002154 9.2e-09 63.9 129 31.8
Ciclev10014168m.g Citrus clementina HOM05D002149 ORTHO05D002154 4.6e-08 61.6 129 31.0
COL.COLO4_31506 Corchorus olitorius HOM05D002149 ORTHO05D002154 4.6e-08 61.6 129 29.5
Cc02_g13040 Coffea canephora HOM05D002149 ORTHO05D002154 1.0e-07 60.5 129 29.5
Gohir.A10G023900 Gossypium hirsutum HOM05D002149 ORTHO05D002154 1.0e-07 60.5 129 29.5
Gohir.D10G024600 Gossypium hirsutum HOM05D002149 ORTHO05D002154 1.0e-07 60.5 129 29.5
Gorai.011G025900 Gossypium raimondii HOM05D002149 ORTHO05D002154 1.0e-07 60.5 129 29.5
TAR627G0551 Trochodendron aralioides HOM05D002149 ORTHO05D002154 1.0e-07 60.5 129 31.0
vmacro15893 Vaccinium macrocarpon HOM05D002149 ORTHO05D002154 1.0e-07 60.5 129 29.5
CDE07G1093 Ceratophyllum demersum HOM05D002149 ORTHO05D002154 1.3e-07 60.1 64 43.8
BcaNung02771 Brassica carinata HOM05D002149 ORTHO05D002154 1.7e-07 59.7 128 31.2
C03p83130 Brassica napus HOM05D002149 ORTHO05D002154 1.7e-07 59.7 132 27.3
Manes.17G043100 Manihot esculenta HOM05D002149 ORTHO05D002154 1.7e-07 59.7 129 30.2
Solyc02g078550.3 Solanum lycopersicum HOM05D002149 ORTHO05D002154 1.7e-07 59.7 129 27.9
Sopen02g023400 Solanum pennellii HOM05D002149 ORTHO05D002154 1.7e-07 59.7 129 27.9
PGSC0003DMG400022380 Solanum tuberosum HOM05D002149 ORTHO05D002154 1.7e-07 59.7 129 27.9
Thecc.06G191200 Theobroma cacao HOM05D002149 ORTHO05D002154 1.7e-07 59.7 129 30.2
unitig_22.g6591 Utricularia gibba HOM05D002149 ORTHO05D002154 1.7e-07 59.7 64 45.3
MSTRG.14683 Avicennia marina HOM05D002149 ORTHO05D002154 2.3e-07 59.3 129 29.5
Gorai.010G255100 Gossypium raimondii HOM05D002149 ORTHO05D002154 2.3e-07 59.3 129 30.2
Manes.16G025300 Manihot esculenta HOM05D002149 ORTHO05D002154 2.3e-07 59.3 129 30.2
PGR042G1575 Punica granatum HOM05D002149 ORTHO05D002154 2.3e-07 59.3 129 30.2
Aqoxy4G01071 Aquilegia oxysepala HOM05D002149 ORTHO05D002154 3.0e-07 58.9 129 29.5
BcaC01g00686 Brassica carinata HOM05D002149 ORTHO05D002154 3.0e-07 58.9 132 27.3
A08p15030 Brassica napus HOM05D002149 ORTHO05D002154 3.0e-07 58.9 132 27.3
BolC3t20596H Brassica oleracea HOM05D002149 ORTHO05D002154 3.0e-07 58.9 132 27.3
BraA08t33485Z Brassica rapa HOM05D002149 ORTHO05D002154 3.0e-07 58.9 132 27.3
Duzib160G0447 Durio zibethinus HOM05D002149 ORTHO05D002154 3.9e-07 58.5 129 29.5
Eucgr.K02984 Eucalyptus grandis HOM05D002149 ORTHO05D002154 3.9e-07 58.5 64 45.3
Potri.011G049400 Populus trichocarpa HOM05D002149 ORTHO05D002154 3.9e-07 58.5 129 29.5
Rhsim02G0127000 Rhododendron simsii HOM05D002149 ORTHO05D002154 3.9e-07 58.5 129 27.9
A01p12960 Brassica napus HOM05D002149 ORTHO05D002154 5.1e-07 58.2 128 29.7
BraA01t01240Z Brassica rapa HOM05D002149 ORTHO05D002154 5.1e-07 58.2 128 29.7
Sabra11G0033900 Salix brachista HOM05D002149 ORTHO05D002154 5.1e-07 58.2 137 27.0
Zm00001eb022020 Zea mays HOM05D002149 ORTHO05D002154 5.1e-07 58.2 64 43.8
Zm00001eb185700 Zea mays HOM05D002149 ORTHO05D002154 5.1e-07 58.2 64 43.8
CANSAT35G1545 Cannabis sativa HOM05D002149 ORTHO05D002154 6.6e-07 57.8 129 28.7
AUR62043096 Chenopodium quinoa HOM05D002149 ORTHO05D002154 6.6e-07 57.8 64 42.2
Gohir.A06G209900 Gossypium hirsutum HOM05D002149 ORTHO05D002154 6.6e-07 57.8 129 30.2
Os02g0639000 Oryza sativa ssp. japonica HOM05D002149 ORTHO05D002154 6.6e-07 57.8 64 40.6
Glyma.07G194800 Glycine max HOM05D002149 ORTHO05D002154 8.6e-07 57.4 129 27.9
SalBow8G5259 Salvia bowleyana HOM05D002149 ORTHO05D002154 8.6e-07 57.4 129 28.7
Sp7g19780 Schrenkiella parvula HOM05D002149 ORTHO05D002154 8.6e-07 57.4 128 29.7
Migut.J00183 Erythranthe guttata HOM05D002149 ORTHO05D002154 1.1e-06 57.0 64 42.2
Nn1g04013 Nelumbo nucifera HOM05D002149 ORTHO05D002154 1.1e-06 57.0 129 30.2
SGA_v2.0_scaffold7G03978 Striga asiatica HOM05D002149 ORTHO05D002154 1.1e-06 57.0 129 29.5
THA.LOC104812840 Tarenaya hassleriana HOM05D002149 ORTHO05D002154 1.1e-06 57.0 128 28.1
DCAR_028109 Daucus carota HOM05D002149 ORTHO05D002154 1.5e-06 56.6 64 39.1
Duzib235G0094 Durio zibethinus HOM05D002149 ORTHO05D002154 1.5e-06 56.6 129 29.5
ECA236G0114 Erigeron canadensis HOM05D002149 ORTHO05D002154 1.5e-06 56.6 64 40.6
Medtr4g089010 Medicago truncatula HOM05D002149 ORTHO05D002154 1.5e-06 56.6 64 40.6
Sed0024319 Sechium edule HOM05D002149 ORTHO05D002154 1.5e-06 56.6 129 27.9
Zm00001eb248450 Zea mays HOM05D002149 ORTHO05D002154 1.5e-06 56.6 64 42.2
EL10Ac8g20342 Beta vulgaris HOM05D002149 ORTHO05D002154 1.9e-06 56.2 129 30.2
CsaV3_6G049980 Cucumis sativus L. HOM05D002149 ORTHO05D002154 1.9e-06 56.2 129 27.9
Eucgr.K02986 Eucalyptus grandis HOM05D002149 ORTHO05D002154 1.9e-06 56.2 64 40.6
Thhalv10024324m.g Eutrema salsugineum HOM05D002149 ORTHO05D002154 1.9e-06 56.2 128 28.9
FvH4_3g04830 Fragaria vesca HOM05D002149 ORTHO05D002154 1.9e-06 56.2 63 42.9
FAN11G2695 Fragaria x ananassa HOM05D002149 ORTHO05D002154 1.9e-06 56.2 63 42.9
FAN16G1429 Fragaria x ananassa HOM05D002149 ORTHO05D002154 1.9e-06 56.2 63 42.9
FAN21G1933 Fragaria x ananassa HOM05D002149 ORTHO05D002154 1.9e-06 56.2 63 42.9
FAN25G0477 Fragaria x ananassa HOM05D002149 ORTHO05D002154 1.9e-06 56.2 63 42.9
Oeu064510.1 Olea europaea HOM05D002149 ORTHO05D002154 1.9e-06 56.2 64 40.6
PSO541G5777 Papaver somniferum HOM05D002149 ORTHO05D002154 1.9e-06 56.2 129 30.2
PSO675G8102 Papaver somniferum HOM05D002149 ORTHO05D002154 1.9e-06 56.2 129 30.2
EL10Ac8g19498 Beta vulgaris HOM05D002149 ORTHO05D002154 2.5e-06 55.8 64 40.6
CSS0012849 Camellia sinensis var. sinensis HOM05D002149 ORTHO05D002154 2.5e-06 55.8 129 28.7
Lalb_Chr16g0383611 Lupinus albus HOM05D002149 ORTHO05D002154 2.5e-06 55.8 64 39.1
Oeu055168.1 Olea europaea HOM05D002149 ORTHO05D002154 2.5e-06 55.8 64 40.6
BcaC06g30671 Brassica carinata HOM05D002149 ORTHO05D002154 3.3e-06 55.5 72 37.5
BcaNung00845 Brassica carinata HOM05D002149 ORTHO05D002154 3.3e-06 55.5 72 37.5
A03p52860 Brassica napus HOM05D002149 ORTHO05D002154 3.3e-06 55.5 72 37.5
C01p15610 Brassica napus HOM05D002149 ORTHO05D002154 3.3e-06 55.5 72 37.5
C07p51300 Brassica napus HOM05D002149 ORTHO05D002154 3.3e-06 55.5 72 37.5
BolC1t01513H Brassica oleracea HOM05D002149 ORTHO05D002154 3.3e-06 55.5 72 37.5
BolC7t45630H Brassica oleracea HOM05D002149 ORTHO05D002154 3.3e-06 55.5 72 37.5
BraA03t14362Z Brassica rapa HOM05D002149 ORTHO05D002154 3.3e-06 55.5 72 37.5
Glyma.13G181700 Glycine max HOM05D002149 ORTHO05D002154 3.3e-06 55.5 64 39.1
Lsat_1_v5_gn_7_19061 Lactuca sativa HOM05D002149 ORTHO05D002154 3.3e-06 55.5 64 39.1
AagrBONN_evm.TU.Sc2ySwM_362.2934 Anthoceros agrestis HOM05D002149 ORTHO05D002154 4.3e-06 55.1 64 40.6
arahy.Tifrunner.gnm1.ann1.55XWXX Arachis hypogaea HOM05D002149 ORTHO05D002154 4.3e-06 55.1 129 27.9
arahy.Tifrunner.gnm1.ann1.9SSZ5T Arachis hypogaea HOM05D002149 ORTHO05D002154 4.3e-06 55.1 129 27.9
HanXRQChr15g0482511 Helianthus annuus HOM05D002149 ORTHO05D002154 4.3e-06 55.1 64 39.1
Lj2C286T11 Lonicera japonica HOM05D002149 ORTHO05D002154 4.3e-06 55.1 64 37.5
Mapoly0125s0035 Marchantia polymorpha HOM05D002149 ORTHO05D002154 4.3e-06 55.1 64 42.2
Psat7g113080 Pisum sativum HOM05D002149 ORTHO05D002154 4.3e-06 55.1 64 39.1
RcHm_v2.0_Chr5g0007991 Rosa chinensis HOM05D002149 ORTHO05D002154 4.3e-06 55.1 63 41.3
Hund22325 Selenicereus undatus HOM05D002149 ORTHO05D002154 4.3e-06 55.1 64 40.6
THA.LOC104816651 Tarenaya hassleriana HOM05D002149 ORTHO05D002154 4.3e-06 55.1 72 38.9
TWI63G0661 Tripterygium wilfordii HOM05D002149 ORTHO05D002154 4.3e-06 55.1 129 28.7
vmacro08853 Vaccinium macrocarpon HOM05D002149 ORTHO05D002154 4.3e-06 55.1 64 39.1
HPP92_003412 Vanilla planifolia HOM05D002149 ORTHO05D002154 4.3e-06 55.1 64 39.1
CAN.G1627.11 Capsicum annuum HOM05D002149 ORTHO05D002154 5.6e-06 54.7 129 28.7
Cc06_g01480 Coffea canephora HOM05D002149 ORTHO05D002154 5.6e-06 54.7 64 39.1
CsaV3_4G026160 Cucumis sativus L. HOM05D002149 ORTHO05D002154 5.6e-06 54.7 64 42.2
HanXRQChr04g0124171 Helianthus annuus HOM05D002149 ORTHO05D002154 5.6e-06 54.7 64 39.1
Lj4g0027648 Lotus japonicus HOM05D002149 ORTHO05D002154 5.6e-06 54.7 64 39.1
QL05p039486 Quercus lobata HOM05D002149 ORTHO05D002154 5.6e-06 54.7 129 27.9
Sed0016039 Sechium edule HOM05D002149 ORTHO05D002154 5.6e-06 54.7 64 39.1
Sc17g0006300 Simmondsia chinensis HOM05D002149 ORTHO05D002154 5.6e-06 54.7 64 39.1
THA.LOC104806283 Tarenaya hassleriana HOM05D002149 ORTHO05D002154 5.6e-06 54.7 128 27.3
GSVIVG01033975001 Vitis vinifera HOM05D002149 ORTHO05D002154 5.6e-06 54.7 64 40.6
Aqoxy4G02609 Aquilegia oxysepala HOM05D002149 ORTHO05D002154 7.3e-06 54.3 64 42.2
SalBow5G3383 Salvia bowleyana HOM05D002149 ORTHO05D002154 7.3e-06 54.3 64 39.1
Actinidia20727 Actinidia chinensis HOM05D002149 ORTHO05D002154 9.5e-06 53.9 64 39.1
ATR0618G329 Amborella trichopoda HOM05D002149 ORTHO05D002154 9.5e-06 53.9 64 39.1
Dinv03586 Davidia involucrata HOM05D002149 ORTHO05D002154 9.5e-06 53.9 64 39.1
Glyma.15G072000 Glycine max HOM05D002149 ORTHO05D002154 9.5e-06 53.9 129 27.9
Lalb_Chr05g0218371 Lupinus albus HOM05D002149 ORTHO05D002154 9.5e-06 53.9 60 40.0
Manes.09G104300 Manihot esculenta HOM05D002149 ORTHO05D002154 9.5e-06 53.9 64 42.2
Nitab4.5_0000335g0130 Nicotiana tabacum HOM05D002149 ORTHO05D002154 9.5e-06 53.9 64 40.6
Potri.016G114600 Populus trichocarpa HOM05D002149 ORTHO05D002154 9.5e-06 53.9 64 40.6
SGA_v2.0_scaffold85G26748 Striga asiatica HOM05D002149 ORTHO05D002154 9.5e-06 53.9 64 39.1
TPR.G11981 Trifolium pratense HOM05D002149 ORTHO05D002154 9.5e-06 53.9 64 39.1


User provided reference genes

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