Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold53G19352 Striga asiatica HOM05D039299 ORTHO05D001571 8.2e-177 623.6 319 100.0
SGA_v2.0_scaffold72G24177 Striga asiatica HOM05D039299 ORTHO05D000227 1.4e-62 244.2 126 96.8
SGA_v2.0_scaffold276G46606 Striga asiatica HOM05D039299 ORTHO05D001571 1.8e-35 154.1 122 71.3
SGA_v2.0_scaffold40G15411 Striga asiatica HOM05D001688 ORTHO05D001571 6.4e-20 102.4 53 94.3
SGA_v2.0_scaffold75G24799 Striga asiatica HOM05D001688 ORTHO05D001571 6.0e-18 95.9 53 88.7
MSTRG.19226 Avicennia marina HOM05D001688 ORTHO05D001571 8.6e-17 92.0 52 86.5
MSTRG.10350 Avicennia marina HOM05D001688 ORTHO05D001571 4.3e-16 89.7 54 81.5
MSTRG.26653 Avicennia marina HOM05D001688 ORTHO05D001571 8.1e-15 85.5 57 75.4
Dinv19823 Davidia involucrata HOM05D001688 ORTHO05D001571 1.4e-14 84.7 53 77.4
CSS0011669 Camellia sinensis var. sinensis HOM05D001688 ORTHO05D001571 4.0e-14 83.2 53 73.6
SalBow3G0353 Salvia bowleyana HOM05D001688 ORTHO05D001571 2.0e-13 80.9 64 65.6
Peaxi162Scf00433g00087 Petunia axillaris HOM05D001688 ORTHO05D001571 3.7e-12 76.6 53 73.6
Solyc10g085560.3 Solanum lycopersicum HOM05D001688 ORTHO05D001571 4.9e-12 76.3 53 73.6
Sopen10g034970 Solanum pennellii HOM05D001688 ORTHO05D001571 4.9e-12 76.3 53 73.6
PGSC0003DMG400008398 Solanum tuberosum HOM05D001688 ORTHO05D001571 4.9e-12 76.3 53 73.6
CAN.G1099.3 Capsicum annuum HOM05D001688 ORTHO05D001571 6.4e-12 75.9 53 71.7
Nitab4.5_0001922g0030 Nicotiana tabacum HOM05D001688 ORTHO05D001571 1.1e-11 75.1 56 69.6
Nitab4.5_0010922g0040 Nicotiana tabacum HOM05D001688 ORTHO05D001571 1.1e-11 75.1 56 69.6
Rhsim03G0081700 Rhododendron simsii HOM05D001688 ORTHO05D001571 1.1e-11 75.1 52 71.2
GSVIVG01033774001 Vitis vinifera HOM05D001688 ORTHO05D001571 1.1e-11 75.1 76 55.3
Dinv21263 Davidia involucrata HOM05D001688 ORTHO05D001571 1.4e-11 74.7 53 67.9
DCAR_020779 Daucus carota HOM05D001688 ORTHO05D001571 1.9e-11 74.3 78 55.1
Nitab4.5_0005447g0010 Nicotiana tabacum HOM05D001688 ORTHO05D001571 1.2e-10 71.6 53 69.8
CiPaw.13G141200 Carya illinoinensis HOM05D001688 ORTHO05D001571 2.7e-10 70.5 53 69.8
CSS0050437 Camellia sinensis var. sinensis HOM05D001688 ORTHO05D001571 6.0e-10 69.3 64 56.2
Atru.chr8.1641 Acer truncatum HOM05D001688 ORTHO05D001571 1.0e-09 68.6 53 66.0
PGR102G0030 Punica granatum HOM05D001688 ORTHO05D001571 1.0e-09 68.6 52 69.2
Hund19274 Selenicereus undatus HOM05D001688 ORTHO05D001571 1.3e-09 68.2 57 64.9
Nitab4.5_0000381g0300 Nicotiana tabacum HOM05D001688 ORTHO05D001571 1.7e-09 67.8 53 67.9
Peaxi162Scf00146g00614 Petunia axillaris HOM05D001688 ORTHO05D001571 1.7e-09 67.8 55 65.5
unitig_8.g4722 Utricularia gibba HOM05D001688 ORTHO05D001571 2.3e-09 67.4 53 62.3
TWI31G0812 Tripterygium wilfordii HOM05D001688 ORTHO05D001571 3.9e-09 66.6 54 66.7
Thhalv10014245m.g Eutrema salsugineum HOM05D001688 ORTHO05D001571 5.1e-09 66.2 57 61.4
Aqoxy2G01426 Aquilegia oxysepala HOM05D001688 ORTHO05D001571 1.1e-08 65.1 56 62.5
Migut.L01752 Erythranthe guttata HOM05D001688 ORTHO05D001571 1.1e-08 65.1 57 63.2
unitig_578.g16376 Utricularia gibba HOM05D001688 ORTHO05D001571 1.1e-08 65.1 54 59.3
ECA248G1510 Erigeron canadensis HOM05D001688 ORTHO05D001571 1.5e-08 64.7 54 61.1
AT5G03740 Arabidopsis thaliana HOM05D001688 ORTHO05D001571 1.9e-08 64.3 59 61.0
Migut.J00993 Erythranthe guttata HOM05D001688 ORTHO05D001571 1.9e-08 64.3 59 62.7
CSS0033564 Camellia sinensis var. sinensis HOM05D001688 ORTHO05D001571 3.3e-08 63.5 53 64.2
Glyma.03G190700 Glycine max HOM05D001688 ORTHO05D001571 3.3e-08 63.5 53 62.3
Prupe.7G118500 Prunus persica HOM05D001688 ORTHO05D001571 4.3e-08 63.2 58 56.9
Sp6g38980 Schrenkiella parvula HOM05D001688 ORTHO05D001571 4.3e-08 63.2 55 58.2
Cc06_g05190 Coffea canephora HOM05D001688 ORTHO05D001571 5.6e-08 62.8 57 66.7
MSTRG.18730 Avicennia marina HOM05D001688 ORTHO05D001571 7.3e-08 62.4 69 47.8
Rhsim01G0208600 Rhododendron simsii HOM05D001688 ORTHO05D001571 7.3e-08 62.4 57 57.9
TWI75G0541 Tripterygium wilfordii HOM05D001688 ORTHO05D001571 7.3e-08 62.4 53 64.2
MSTRG.21067 Avicennia marina HOM05D001688 ORTHO05D001571 9.6e-08 62.0 61 59.0
CAN.G824.24 Capsicum annuum HOM05D001688 ORTHO05D001571 9.6e-08 62.0 53 62.3
CDE11G0679 Ceratophyllum demersum HOM05D001688 ORTHO05D001571 9.6e-08 62.0 57 63.2
CDE06G2425 Ceratophyllum demersum HOM05D001688 ORTHO05D001571 1.2e-07 61.6 58 58.6
Ciclev10012182m.g Citrus clementina HOM05D001688 ORTHO05D001571 1.2e-07 61.6 54 61.1
Lalb_Chr20g0112201 Lupinus albus HOM05D001688 ORTHO05D001571 1.2e-07 61.6 59 55.9
GSVIVG01000318001 Vitis vinifera HOM05D001688 ORTHO05D001571 1.2e-07 61.6 56 58.9
GSVIVG01031404001 Vitis vinifera HOM05D001688 ORTHO05D001571 1.2e-07 61.6 56 60.7
vmacro14374 Vaccinium macrocarpon HOM05D001688 ORTHO05D001571 1.6e-07 61.2 54 59.3
MBI17_g11106_MAGBIO Magnolia biondii HOM05D001688 ORTHO05D001571 2.1e-07 60.8 54 61.1
unitig_22.g5116 Utricularia gibba HOM05D001688 ORTHO05D001571 2.1e-07 60.8 58 53.4
Atru.chr3.3388 Acer truncatum HOM05D001688 ORTHO05D001571 2.8e-07 60.5 53 58.5
AL6G13270 Arabidopsis lyrata HOM05D001688 ORTHO05D001571 3.6e-07 60.1 59 55.9
Os05g0597100 Oryza sativa ssp. japonica HOM05D001688 ORTHO05D001571 3.6e-07 60.1 54 59.3
MSTRG.17123 Avicennia marina HOM05D000050 ORTHO05D000380 4.7e-07 59.7 33 87.9
Haze_19531 Corylus avellana HOM05D001688 ORTHO05D001571 4.7e-07 59.7 52 61.5
Phvul.001G186300 Phaseolus vulgaris HOM05D001688 ORTHO05D001571 4.7e-07 59.7 53 54.7
TWI79G0547 Tripterygium wilfordii HOM05D001688 ORTHO05D001571 4.7e-07 59.7 53 60.4
HanXRQChr01g0028841 Helianthus annuus HOM05D001688 ORTHO05D001571 6.2e-07 59.3 55 60.0
PGSC0003DMG400002684 Solanum tuberosum HOM05D001688 ORTHO05D001571 6.2e-07 59.3 53 60.4
arahy.Tifrunner.gnm1.ann1.63G8L5 Arachis hypogaea HOM05D001688 ORTHO05D001571 8.1e-07 58.9 53 56.6
arahy.Tifrunner.gnm1.ann1.DY7VNH Arachis hypogaea HOM05D001688 ORTHO05D001571 8.1e-07 58.9 53 56.6
CiPaw.09G008200 Carya illinoinensis HOM05D001688 ORTHO05D001571 8.1e-07 58.9 86 43.0
Carub.0006s0266 Capsella rubella HOM05D001688 ORTHO05D001571 1.1e-06 58.5 59 59.3
Haze_23455 Corylus avellana HOM05D001688 ORTHO05D001571 1.1e-06 58.5 53 60.4
Glyma.19G191000 Glycine max HOM05D001688 ORTHO05D001571 1.1e-06 58.5 52 59.6
Nn2g13988 Nelumbo nucifera HOM05D001688 ORTHO05D001571 1.1e-06 58.5 55 65.5
HanXRQChr11g0351121 Helianthus annuus HOM05D001688 ORTHO05D001571 1.4e-06 58.2 53 60.4
AL6G14790 Arabidopsis lyrata HOM05D001688 ORTHO05D001571 1.8e-06 57.8 62 54.8
Solyc09g009030.4 Solanum lycopersicum HOM05D001688 ORTHO05D001571 1.8e-06 57.8 53 58.5
A10p32360 Brassica napus HOM05D001688 ORTHO05D001571 2.4e-06 57.4 57 56.1
BraA10t45276Z Brassica rapa HOM05D001688 ORTHO05D001571 2.4e-06 57.4 57 56.1
CsaV3_6G014670 Cucumis sativus L. HOM05D001688 ORTHO05D001571 2.4e-06 57.4 51 60.8
Duzib170G0280 Durio zibethinus HOM05D001688 ORTHO05D001571 2.4e-06 57.4 51 60.8
Gohir.A01G209500 Gossypium hirsutum HOM05D001688 ORTHO05D001571 3.1e-06 57.0 52 61.5
Lsat_1_v5_gn_1_50361 Lactuca sativa HOM05D001688 ORTHO05D001571 3.1e-06 57.0 56 55.4
CSS0026506 Camellia sinensis var. sinensis HOM05D001688 ORTHO05D001571 4.0e-06 56.6 55 56.4
CsaV3_3G036760 Cucumis sativus L. HOM05D001688 ORTHO05D001571 4.0e-06 56.6 57 61.4
Zm00001eb356490 Zea mays HOM05D001688 ORTHO05D001571 4.0e-06 56.6 54 59.3
BolC9t60053H Brassica oleracea HOM05D001688 ORTHO05D001571 5.2e-06 56.2 55 56.4
Cpa.g.sc47.60 Carica papaya HOM05D001688 ORTHO05D001571 5.2e-06 56.2 52 59.6
Rhsim13G0105400 Rhododendron simsii HOM05D001688 ORTHO05D001571 5.2e-06 56.2 53 58.5
Sed0003899 Sechium edule HOM05D001688 ORTHO05D001571 5.2e-06 56.2 56 58.9
Aa31LG1G21510 Aethionema arabicum HOM05D001688 ORTHO05D001571 6.8e-06 55.8 61 49.2
ClCG10G019420 Citrullus lanatus HOM05D001688 ORTHO05D001571 6.8e-06 55.8 57 57.9
MELO3C009430.2 Cucumis melo HOM05D001688 ORTHO05D001571 6.8e-06 55.8 57 59.6
Duzib093G2204 Durio zibethinus HOM05D001688 ORTHO05D001571 6.8e-06 55.8 56 58.9
Gohir.D01G198600 Gossypium hirsutum HOM05D001688 ORTHO05D001571 6.8e-06 55.8 57 56.1
MD14G1014900 Malus domestica HOM05D001688 ORTHO05D001571 6.8e-06 55.8 58 51.7
HPP92_023108 Vanilla planifolia HOM05D001688 ORTHO05D001571 6.8e-06 55.8 53 62.3
Actinidia07209 Actinidia chinensis HOM05D001688 ORTHO05D001571 8.9e-06 55.5 55 54.5
Lalb_Chr14g0374231 Lupinus albus HOM05D001688 ORTHO05D001571 8.9e-06 55.5 50 56.0


User provided reference genes

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