Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold4G02186 Striga asiatica HOM05D005914 ORTHO05D007361 5.0e-232 807.4 397 100.0
Migut.E01476 Erythranthe guttata HOM05D005914 ORTHO05D007361 6.2e-174 614.4 389 79.2
Haze_21570 Corylus avellana HOM05D005914 ORTHO05D007361 4.6e-153 545.0 388 68.8
SalBow2G3472 Salvia bowleyana HOM05D005914 ORTHO05D007361 7.9e-153 544.3 366 74.3
Cfa013180 Carpinus fangiana HOM05D005914 ORTHO05D007361 1.5e-151 540.0 390 67.9
Cc11_g01820 Coffea canephora HOM05D005914 ORTHO05D007361 6.3e-150 534.6 375 70.1
CSS0046358 Camellia sinensis var. sinensis HOM05D005914 ORTHO05D007361 1.8e-149 533.1 381 68.5
Solyc08g067070.3 Solanum lycopersicum HOM05D005914 ORTHO05D007361 6.9e-149 531.2 373 69.7
Sopen08g021020 Solanum pennellii HOM05D005914 ORTHO05D007361 6.9e-149 531.2 373 70.0
CAN.G98.27 Capsicum annuum HOM05D005914 ORTHO05D007361 2.6e-148 529.3 365 69.6
Rhsim02G0194500 Rhododendron simsii HOM05D005914 ORTHO05D007361 4.5e-148 528.5 385 67.5
QL02p022744 Quercus lobata HOM05D005914 ORTHO05D007361 1.0e-147 527.3 387 66.9
TAR625G1283 Trochodendron aralioides HOM05D005914 ORTHO05D007361 7.2e-146 521.2 386 66.1
unitig_747.g21653 Utricularia gibba HOM05D005914 ORTHO05D007361 6.1e-145 518.1 378 67.2
TWI63G0300 Tripterygium wilfordii HOM05D005914 ORTHO05D007361 1.0e-144 517.3 382 66.8
Actinidia22373 Actinidia chinensis HOM05D005914 ORTHO05D007361 6.7e-144 514.6 381 66.1
RcHm_v2.0_Chr6g0298621 Rosa chinensis HOM05D005914 ORTHO05D007361 1.1e-143 513.8 384 66.7
C07p42340 Brassica napus HOM05D005914 ORTHO05D007361 1.5e-143 513.5 379 67.0
Thecc.09G149100 Theobroma cacao HOM05D005914 ORTHO05D007361 4.3e-143 511.9 378 67.2
BraA06t26540Z Brassica rapa HOM05D005914 ORTHO05D007361 7.4e-143 511.1 370 67.6
MD15G1120500 Malus domestica HOM05D005914 ORTHO05D007361 7.4e-143 511.1 391 66.5
A06p36180 Brassica napus HOM05D005914 ORTHO05D007361 9.7e-143 510.8 371 67.4
Thhalv10004397m.g Eutrema salsugineum HOM05D005914 ORTHO05D007361 2.2e-142 509.6 383 66.8
Sabra06G0196100 Salix brachista HOM05D005914 ORTHO05D007361 2.8e-142 509.2 379 66.2
THA.LOC104799221 Tarenaya hassleriana HOM05D005914 ORTHO05D007361 2.8e-142 509.2 384 66.1
Sp2g22050 Schrenkiella parvula HOM05D005914 ORTHO05D007361 8.2e-142 507.7 382 65.7
Potri.006G250800 Populus trichocarpa HOM05D005914 ORTHO05D007361 1.4e-141 506.9 382 65.4
CiPaw.07G220900 Carya illinoinensis HOM05D005914 ORTHO05D007361 3.1e-141 505.8 388 65.2
Nitab4.5_0000151g0200 Nicotiana tabacum HOM05D005914 ORTHO05D007361 6.9e-141 504.6 374 66.6
FvH4_2g29650 Fragaria vesca HOM05D005914 ORTHO05D007361 3.4e-140 502.3 378 65.3
Gohir.A08G236800 Gossypium hirsutum HOM05D005914 ORTHO05D007361 3.4e-140 502.3 382 64.7
AT5G25480 Arabidopsis thaliana HOM05D005914 ORTHO05D007361 4.5e-140 501.9 373 66.2
FAN24G3193 Fragaria x ananassa HOM05D005914 ORTHO05D007361 5.9e-140 501.5 378 65.3
Gorai.004G274400 Gossypium raimondii HOM05D005914 ORTHO05D007361 5.9e-140 501.5 381 64.6
Carub.0006s2334 Capsella rubella HOM05D005914 ORTHO05D007361 1.0e-139 500.7 381 65.6
CANSAT80G0109 Cannabis sativa HOM05D005914 ORTHO05D007361 1.3e-139 500.4 390 64.6
CANSAT80G2406 Cannabis sativa HOM05D005914 ORTHO05D007361 2.2e-139 499.6 390 64.6
Ciclev10008576m.g Citrus clementina HOM05D005914 ORTHO05D007361 2.9e-139 499.2 381 66.4
AL6G37280 Arabidopsis lyrata HOM05D005914 ORTHO05D007361 3.8e-139 498.8 375 65.6
MELO3C011235.2 Cucumis melo HOM05D005914 ORTHO05D007361 3.8e-139 498.8 379 65.2
Nitab4.5_0001669g0040 Nicotiana tabacum HOM05D005914 ORTHO05D007361 6.5e-139 498.0 370 66.2
Aa31LG11G4850 Aethionema arabicum HOM05D005914 ORTHO05D007361 1.9e-138 496.5 380 65.8
Aqoxy7G02060 Aquilegia oxysepala HOM05D005914 ORTHO05D007361 2.5e-138 496.1 380 63.7
DCAR_006234 Daucus carota HOM05D005914 ORTHO05D007361 3.2e-138 495.7 404 62.9
GSVIVG01035808001 Vitis vinifera HOM05D005914 ORTHO05D007361 4.2e-138 495.4 369 66.7
Lj6g0019162 Lotus japonicus HOM05D005914 ORTHO05D007361 6.1e-137 491.5 375 65.9
Eucgr.C01789 Eucalyptus grandis HOM05D005914 ORTHO05D007361 1.8e-136 490.0 392 63.0
ClCG08G013130 Citrullus lanatus HOM05D005914 ORTHO05D007361 2.3e-136 489.6 381 63.3
HanXRQChr13g0402741 Helianthus annuus HOM05D005914 ORTHO05D007361 6.7e-136 488.0 370 64.6
Atru.chr7.2376 Acer truncatum HOM05D005914 ORTHO05D007361 1.5e-135 486.9 396 62.1
PGR142G2371 Punica granatum HOM05D005914 ORTHO05D007361 1.5e-135 486.9 384 64.3
VMungo0540G0716 Vigna mungo HOM05D005914 ORTHO05D007361 2.0e-135 486.5 389 64.8
arahy.Tifrunner.gnm1.ann1.J9LH1L Arachis hypogaea HOM05D005914 ORTHO05D007361 5.7e-135 485.0 377 65.8
Glyma.15G054900 Glycine max HOM05D005914 ORTHO05D007361 5.7e-135 485.0 374 66.3
Psat1g215880 Pisum sativum HOM05D005914 ORTHO05D007361 7.4e-135 484.6 373 66.8
PSO170G3156 Papaver somniferum HOM05D005914 ORTHO05D007361 1.3e-134 483.8 393 61.1
Nn2g11936 Nelumbo nucifera HOM05D005914 ORTHO05D007361 2.8e-134 482.6 355 67.3
Lalb_Chr20g0122961 Lupinus albus HOM05D005914 ORTHO05D007361 3.7e-134 482.3 373 65.4
EL10Ac2g02591 Beta vulgaris HOM05D005914 ORTHO05D007361 1.8e-133 479.9 390 62.3
Ca_00145_v3 Cicer arietinum L. HOM05D005914 ORTHO05D007361 2.4e-133 479.6 376 64.4
arahy.Tifrunner.gnm1.ann1.T9E77A Arachis hypogaea HOM05D005914 ORTHO05D007361 7.0e-133 478.0 377 65.5
ECA233G4604 Erigeron canadensis HOM05D005914 ORTHO05D007361 7.0e-133 478.0 389 61.7
Medtr2g009140 Medicago truncatula HOM05D005914 ORTHO05D007361 9.1e-133 477.6 372 65.3
Lsat_1_v5_gn_6_22181 Lactuca sativa HOM05D005914 ORTHO05D007361 4.5e-132 475.3 385 63.4
CDE04G0852 Ceratophyllum demersum HOM05D005914 ORTHO05D007361 5.9e-132 474.9 394 60.7
HPP92_012620 Vanilla planifolia HOM05D005914 ORTHO05D007361 9.4e-130 467.6 373 63.5
Peaxi162Scf00341g00624 Petunia axillaris HOM05D005914 ORTHO05D007361 1.8e-128 463.4 329 67.5
Duzib150G0329 Durio zibethinus HOM05D005914 ORTHO05D007361 5.2e-128 461.8 386 60.1
Zm00001eb358040 Zea mays HOM05D005914 ORTHO05D007361 1.3e-126 457.2 369 62.3
Sed0010731 Sechium edule HOM05D005914 ORTHO05D007361 2.4e-125 453.0 364 62.1
Gohir.D08G257400 Gossypium hirsutum HOM05D005914 ORTHO05D007361 8.5e-123 444.5 381 60.1
COL.COLO4_23983 Corchorus olitorius HOM05D005914 ORTHO05D007361 1.9e-122 443.4 389 58.9
BolC7t44763H Brassica oleracea HOM05D005914 ORTHO05D007361 1.2e-121 440.7 340 64.4
arahy.Tifrunner.gnm1.ann1.71PCZ9 Arachis hypogaea HOM05D005914 ORTHO05D007361 5.2e-120 435.3 343 65.6
Manes.16G119400 Manihot esculenta HOM05D005914 ORTHO05D007361 8.0e-113 411.4 313 64.5
Mapoly0011s0185 Marchantia polymorpha HOM05D005914 ORTHO05D007361 7.5e-111 404.8 449 51.2
AUR62024878 Chenopodium quinoa HOM05D005914 ORTHO05D007361 9.1e-109 397.9 357 58.0
Prupe.1G473200 Prunus persica HOM05D005914 ORTHO05D007361 4.5e-108 395.6 325 62.8
Dinv11618 Davidia involucrata HOM05D005914 ORTHO05D007361 7.7e-108 394.8 295 66.1
TPR.G25250 Trifolium pratense HOM05D005914 ORTHO05D008190 1.4e-104 384.0 307 63.8
SMO146G0196 Selaginella moellendorffii HOM05D005914 ORTHO05D007361 8.9e-104 381.3 371 54.2
Pp3c12_2410 Physcomitrium patens HOM05D005914 ORTHO05D007361 1.3e-102 377.5 469 47.5
CsaV3_2G031850 Cucumis sativus L. HOM05D005914 ORTHO05D007361 1.2e-100 370.9 388 52.1
ATR0815G040 Amborella trichopoda HOM05D005914 ORTHO05D007361 9.5e-98 361.3 360 53.1
MSTRG.13986 Avicennia marina HOM05D005914 ORTHO05D007361 2.3e-91 340.1 241 68.5
PSO455G0041 Papaver somniferum HOM05D005914 ORTHO05D007361 1.9e-90 337.0 289 59.2
Phvul.006G205000 Phaseolus vulgaris HOM05D005914 ORTHO05D007361 3.6e-89 332.8 290 60.0
AUR62030669 Chenopodium quinoa HOM05D005914 ORTHO05D007361 2.6e-87 326.6 324 52.5
FAN27G2538 Fragaria x ananassa HOM05D005914 ORTHO05D007361 7.1e-85 318.5 373 50.4
CBR_g3173 Chara braunii HOM05D005914 ORTHO05D007361 1.2e-81 307.8 538 37.9
Os01g0612000 Oryza sativa ssp. japonica HOM05D005914 ORTHO05D007361 8.9e-80 301.6 272 57.7
AagrBONN_evm.TU.Sc2ySwM_228.810 Anthoceros agrestis HOM05D005914 ORTHO05D007361 1.9e-74 283.9 330 47.3
MCO14G456 Micromonas commoda HOM05D005914 ORTHO05D007361 1.6e-73 280.8 389 43.7
FAN20G2480 Fragaria x ananassa HOM05D005914 ORTHO05D007361 6.8e-72 275.4 371 45.0
Cpa.g.sc91.41 Carica papaya HOM05D005914 ORTHO05D007361 2.6e-71 273.5 162 80.2
CARHR187910 Cardamine hirsuta HOM05D005914 ORTHO05D007361 1.1e-69 268.1 166 76.5
Lj7C718G14 Lonicera japonica HOM05D005914 ORTHO05D007361 9.3e-69 265.0 264 52.3
MD08G1143700 Malus domestica HOM05D005914 ORTHO05D007361 2.7e-68 263.5 280 53.2
PRCOL_00003212 Prasinoderma coloniale HOM05D005914 ORTHO05D007361 2.7e-68 263.5 442 37.6
MBI04_g29855_MAGBIO Magnolia biondii HOM05D005914 ORTHO05D007361 1.7e-67 260.8 265 54.0
MBI04_g46184_MAGBIO Magnolia biondii HOM05D005914 ORTHO05D007361 4.8e-65 252.7 350 44.3
Ah.12g063960 Amaranthus hybridus HOM05D005914 ORTHO05D007361 2.4e-61 240.4 155 74.2
RcHm_v2.0_Chr1g0355831 Rosa chinensis HOM05D005914 ORTHO05D007361 7.3e-58 228.8 246 50.8
Hma1.2p1_0000F.1_g000780 Hydrangea macrophylla HOM05D005914 ORTHO05D007361 1.6e-52 211.1 216 53.7
MD15G1439700 Malus domestica HOM05D005914 ORTHO05D007361 2.7e-44 183.7 404 36.1
MCO11G560 Micromonas commoda HOM05D005914 ORTHO05D007361 3.9e-43 179.9 405 34.3
Glyma.08G177800 Glycine max HOM05D005914 ORTHO05D007361 7.4e-42 175.6 196 49.0
Nitab4.5_0003498g0080 Nicotiana tabacum HOM05D005914 ORTHO05D007361 3.7e-41 173.3 114 75.4
SEGI_35502 Sequoiadendron giganteum HOM05D005914 ORTHO05D007361 2.2e-38 164.1 111 72.1
CAN.G374.12 Capsicum annuum HOM05D005914 ORTHO05D007361 7.1e-37 159.1 301 34.9
Oeu033137.1 Olea europaea HOM05D005914 ORTHO05D007361 9.0e-32 142.1 84 81.0
Cre12.g484600 Chlamydomonas reinhardtii HOM05D005914 ORTHO05D007361 3.4e-31 140.2 180 42.8
PGR031G2948 Punica granatum HOM05D005914 ORTHO05D007361 4.5e-31 139.8 82 78.0
Sc09g0008460 Simmondsia chinensis HOM05D005914 ORTHO05D007361 2.3e-27 127.5 141 48.9
Sc09g0008440 Simmondsia chinensis HOM05D005914 ORTHO05D007361 7.4e-26 122.5 89 65.2
Sc09g0008580 Simmondsia chinensis HOM05D005914 ORTHO05D007361 6.3e-25 119.4 80 73.8
Sc09g0008450 Simmondsia chinensis HOM05D005914 ORTHO05D007361 2.0e-23 114.4 80 67.5
TPR.G22731 Trifolium pratense HOM05D005914 ORTHO05D007361 1.6e-20 104.8 64 76.6
SEGI_14251 Sequoiadendron giganteum HOM05D005914 ORTHO05D007361 2.3e-19 100.9 63 79.4
Aqoxy7G02061 Aquilegia oxysepala HOM05D005914 ORTHO05D007361 5.7e-18 96.3 56 73.2
MBI04_g46185_MAGBIO Magnolia biondii HOM05D005914 ORTHO05D007361 2.4e-16 90.9 63 63.5
MBI04_g10409_MAGBIO Magnolia biondii HOM05D005914 ORTHO05D007361 3.1e-16 90.5 63 63.5
Sc09g0008540 Simmondsia chinensis HOM05D002899 ORTHO05D003850 1.3e-14 85.1 53 73.6
SEGI_16557 Sequoiadendron giganteum HOM05D005914 ORTHO05D007361 1.9e-13 81.3 50 70.0
MD08G1144900 Malus domestica HOM05D005914 ORTHO05D007361 6.7e-11 72.8 92 41.3
Ah.12g063950 Amaranthus hybridus HOM05D005914 ORTHO05D007361 1.7e-09 68.2 120 30.8
Sc09g0008600 Simmondsia chinensis HOM05D005914 ORTHO05D007361 2.4e-08 64.3 43 74.4
Lj7A718T66 Lonicera japonica HOM05D005914 ORTHO05D007361 7.0e-08 62.8 73 46.6
Ah.12g063940 Amaranthus hybridus HOM05D005914 ORTHO05D007361 1.0e-06 58.9 41 65.9
Mapoly0043s0021 Marchantia polymorpha HOM05D016551 ORTHO05D019648 2.9e-06 57.4 120 31.7
Glyma.08G177700 Glycine max HOM05D005914 ORTHO05D007361 8.5e-06 55.8 47 55.3


User provided reference genes

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