Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold4G02063 Striga asiatica HOM05D006077 ORTHO05D007499 3.3e-95 352.4 299 100.0
Medtr8g020500 Medicago truncatula HOM05D006077 ORTHO05D007499 9.2e-29 131.7 83 79.5
Psat4g182400 Pisum sativum HOM05D006077 ORTHO05D007499 1.2e-28 131.3 83 79.5
TPR.G32491 Trifolium pratense HOM05D006077 ORTHO05D007499 1.2e-28 131.3 83 79.5
Lj3g0010947 Lotus japonicus HOM05D006077 ORTHO05D007499 1.6e-28 131.0 83 77.1
Dinv37869 Davidia involucrata HOM05D006077 ORTHO05D007499 2.1e-28 130.6 83 78.3
TWI79G1574 Tripterygium wilfordii HOM05D006077 ORTHO05D007499 2.1e-28 130.6 83 78.3
Glyma.07G038100 Glycine max HOM05D006077 ORTHO05D007499 2.7e-28 130.2 83 78.3
Lalb_Chr01g0013591 Lupinus albus HOM05D006077 ORTHO05D007499 2.7e-28 130.2 83 78.3
Glyma.16G007300 Glycine max HOM05D006077 ORTHO05D007499 3.5e-28 129.8 83 77.1
MD09G1183900 Malus domestica HOM05D006077 ORTHO05D007499 3.5e-28 129.8 83 78.3
Phvul.010G130300 Phaseolus vulgaris HOM05D006077 ORTHO05D007499 3.5e-28 129.8 83 77.1
Sc15g0000510 Simmondsia chinensis HOM05D006077 ORTHO05D007499 6.0e-28 129.0 83 75.9
TWI75G1673 Tripterygium wilfordii HOM05D006077 ORTHO05D007499 6.0e-28 129.0 83 77.1
Haze_16030 Corylus avellana HOM05D006077 ORTHO05D007499 7.8e-28 128.6 83 77.1
PSO063G4040 Papaver somniferum HOM05D006077 ORTHO05D007499 7.8e-28 128.6 83 78.3
PSO421G0038 Papaver somniferum HOM05D006077 ORTHO05D007499 7.8e-28 128.6 83 78.3
Prupe.3G042200 Prunus persica HOM05D006077 ORTHO05D007499 7.8e-28 128.6 83 77.1
Thecc.06G119600 Theobroma cacao HOM05D006077 ORTHO05D007499 7.8e-28 128.6 83 77.1
VMungo0331G1077 Vigna mungo HOM05D006077 ORTHO05D007499 7.8e-28 128.6 83 77.1
GSVIVG01016766001 Vitis vinifera HOM05D006077 ORTHO05D007499 7.8e-28 128.6 83 77.1
Actinidia26028 Actinidia chinensis HOM05D006077 ORTHO05D007499 1.0e-27 128.3 83 77.1
CSS0011852 Camellia sinensis var. sinensis HOM05D006077 ORTHO05D007499 1.0e-27 128.3 83 77.1
FvH4_6g34660 Fragaria vesca HOM05D006077 ORTHO05D007499 1.0e-27 128.3 83 75.9
FAN09G3570 Fragaria x ananassa HOM05D006077 ORTHO05D007499 1.0e-27 128.3 83 75.9
FAN14G4463 Fragaria x ananassa HOM05D006077 ORTHO05D007499 1.0e-27 128.3 83 75.9
RcHm_v2.0_Chr2g0145211 Rosa chinensis HOM05D006077 ORTHO05D007499 1.0e-27 128.3 83 75.9
Solyc12g049310.2 Solanum lycopersicum HOM05D006077 ORTHO05D007499 1.0e-27 128.3 83 75.9
Sopen12g023790 Solanum pennellii HOM05D006077 ORTHO05D007499 1.0e-27 128.3 83 75.9
TAR636G2213 Trochodendron aralioides HOM05D006077 ORTHO05D007499 1.0e-27 128.3 83 77.1
Migut.D00939 Erythranthe guttata HOM05D006077 ORTHO05D007499 1.7e-27 127.5 83 77.1
Hma1.2p1_0291F.1_g115130 Hydrangea macrophylla HOM05D006077 ORTHO05D007499 1.7e-27 127.5 83 74.7
Gohir.A05G405800 Gossypium hirsutum HOM05D006077 ORTHO05D007499 3.0e-27 126.7 83 75.9
Gohir.D04G009800 Gossypium hirsutum HOM05D006077 ORTHO05D007499 3.0e-27 126.7 83 75.9
Gorai.012G011600 Gossypium raimondii HOM05D006077 ORTHO05D007499 3.0e-27 126.7 83 75.9
Hma1.2p1_0496F.1_g166240 Hydrangea macrophylla HOM05D006077 ORTHO05D007499 3.0e-27 126.7 84 73.8
CANSAT64G0122 Cannabis sativa HOM05D006077 ORTHO05D007499 3.9e-27 126.3 83 75.9
CANSAT64G2602 Cannabis sativa HOM05D006077 ORTHO05D007499 3.9e-27 126.3 83 75.9
CAN.G1368.2 Capsicum annuum HOM05D006077 ORTHO05D007499 3.9e-27 126.3 83 74.7
CDE11G1182 Ceratophyllum demersum HOM05D006077 ORTHO05D007499 3.9e-27 126.3 83 72.3
Peaxi162Scf00177g00511 Petunia axillaris HOM05D006077 ORTHO05D007499 3.9e-27 126.3 83 75.9
Hund05739 Selenicereus undatus HOM05D006077 ORTHO05D007499 3.9e-27 126.3 83 74.7
BraA05t22354Z Brassica rapa HOM05D006077 ORTHO05D007499 5.1e-27 125.9 83 75.9
CiPaw.02G136000 Carya illinoinensis HOM05D006077 ORTHO05D007499 5.1e-27 125.9 83 74.7
ATR0598G320 Amborella trichopoda HOM05D006077 ORTHO05D007499 6.6e-27 125.6 83 74.7
BcaC05g29136 Brassica carinata HOM05D006077 ORTHO05D007499 6.6e-27 125.6 83 74.7
A05p35440 Brassica napus HOM05D006077 ORTHO05D007499 6.6e-27 125.6 83 74.7
C05p53730 Brassica napus HOM05D006077 ORTHO05D007499 6.6e-27 125.6 83 74.7
BolC5t34043H Brassica oleracea HOM05D006077 ORTHO05D007499 6.6e-27 125.6 83 74.7
Rhsim08G0238900 Rhododendron simsii HOM05D006077 ORTHO05D007499 6.6e-27 125.6 83 74.7
Aqoxy7G01092 Aquilegia oxysepala HOM05D006077 ORTHO05D007499 8.6e-27 125.2 83 75.9
BcaB06g25414 Brassica carinata HOM05D006077 ORTHO05D007499 8.6e-27 125.2 83 74.7
Sp3g12220 Schrenkiella parvula HOM05D006077 ORTHO05D007499 8.6e-27 125.2 83 74.7
AL1G62920 Arabidopsis lyrata HOM05D006077 ORTHO05D007499 1.1e-26 124.8 83 75.9
AT1G54210 Arabidopsis thaliana HOM05D006077 ORTHO05D007499 1.1e-26 124.8 83 75.9
arahy.Tifrunner.gnm1.ann1.G5XP6S Arachis hypogaea HOM05D006077 ORTHO05D007499 1.1e-26 124.8 83 74.7
arahy.Tifrunner.gnm1.ann1.G7AU8E Arachis hypogaea HOM05D006077 ORTHO05D007499 1.1e-26 124.8 83 74.7
Carub.0001s4344 Capsella rubella HOM05D006077 ORTHO05D007499 1.1e-26 124.8 83 75.9
RcHm_v2.0_Chr5g0053491 Rosa chinensis HOM05D006077 ORTHO05D007499 1.1e-26 124.8 83 74.7
Ah.08g216780 Amaranthus hybridus HOM05D006077 ORTHO05D007499 1.9e-26 124.0 83 71.1
Cc00_g21000 Coffea canephora HOM05D006077 ORTHO05D007499 2.5e-26 123.6 83 73.5
Ciclev10026605m.g Citrus clementina HOM05D006077 ORTHO05D007499 3.3e-26 123.2 83 72.3
CiPaw.01G218900 Carya illinoinensis HOM05D006077 ORTHO05D007499 4.3e-26 122.9 84 75.0
ECA232G1087 Erigeron canadensis HOM05D006077 ORTHO05D007499 5.6e-26 122.5 83 73.5
Lsat_1_v5_gn_4_92920 Lactuca sativa HOM05D006077 ORTHO05D007499 5.6e-26 122.5 83 73.5
SalBow6G4082 Salvia bowleyana HOM05D006077 ORTHO05D007499 7.3e-26 122.1 83 73.5
SalBow6G4389 Salvia bowleyana HOM05D006077 ORTHO05D007499 7.3e-26 122.1 83 73.5
AL3G26170 Arabidopsis lyrata HOM05D006077 ORTHO05D007499 9.5e-26 121.7 83 73.5
Carub.0003s1355 Capsella rubella HOM05D006077 ORTHO05D007499 1.2e-25 121.3 83 73.5
Eucgr.F03177 Eucalyptus grandis HOM05D006077 ORTHO05D007499 1.2e-25 121.3 83 72.3
RcHm_v2.0_Chr3g0490611 Rosa chinensis HOM05D006077 ORTHO05D007499 1.2e-25 121.3 83 72.3
Manes.11G020500 Manihot esculenta HOM05D006077 ORTHO05D007499 1.6e-25 120.9 83 69.9
THA.LOC104822655 Tarenaya hassleriana HOM05D006077 ORTHO05D007499 2.1e-25 120.6 83 74.7
BolC6t36071H Brassica oleracea HOM05D006077 ORTHO05D007499 6.2e-25 119.0 85 72.9
BraA06t23260Z Brassica rapa HOM05D006077 ORTHO05D007499 6.2e-25 119.0 85 72.9
Zm00001eb256700 Zea mays HOM05D006077 ORTHO05D007499 6.2e-25 119.0 83 71.1
BcaB07g33245 Brassica carinata HOM05D006077 ORTHO05D007499 8.1e-25 118.6 83 74.7
BcaB07g33246 Brassica carinata HOM05D006077 ORTHO05D007499 8.1e-25 118.6 83 74.7
BcaC08g43600 Brassica carinata HOM05D006077 ORTHO05D007499 8.1e-25 118.6 83 74.7
A06p00460 Brassica napus HOM05D006077 ORTHO05D007499 8.1e-25 118.6 83 74.7
C06p09980 Brassica napus HOM05D006077 ORTHO05D007499 8.1e-25 118.6 83 74.7
Thhalv10011896m.g Eutrema salsugineum HOM05D006077 ORTHO05D007499 1.1e-24 118.2 83 74.7
Potri.003G064300 Populus trichocarpa HOM05D006077 ORTHO05D007499 1.1e-24 118.2 83 67.5
CARHR044580 Cardamine hirsuta HOM05D006077 ORTHO05D007499 1.4e-24 117.9 83 72.3
Sed0008411 Sechium edule HOM05D006077 ORTHO05D007499 1.8e-24 117.5 83 69.9
ClCG07G014030 Citrullus lanatus HOM05D006077 ORTHO05D007499 2.3e-24 117.1 83 71.1
MELO3C025809.2 Cucumis melo HOM05D006077 ORTHO05D007499 2.3e-24 117.1 83 71.1
CsaV3_3G043520 Cucumis sativus L. HOM05D006077 ORTHO05D007499 2.3e-24 117.1 83 71.1
Mapoly0025s0134 Marchantia polymorpha HOM05D006077 ORTHO05D007499 3.1e-24 116.7 85 68.2
Aa31LG8G1170 Aethionema arabicum HOM05D006077 ORTHO05D007499 4.0e-24 116.3 86 68.6
Potri.001G169700 Populus trichocarpa HOM05D006077 ORTHO05D007499 4.0e-24 116.3 83 65.1
Nitab4.5_0000189g0210 Nicotiana tabacum HOM05D006077 ORTHO05D007499 1.2e-23 114.8 69 79.7
Nitab4.5_0001199g0100 Nicotiana tabacum HOM05D006077 ORTHO05D007499 1.2e-23 114.8 69 79.7
SalBow6G7202 Salvia bowleyana HOM05D006077 ORTHO05D007499 2.0e-23 114.0 90 67.8
Sed0025034 Sechium edule HOM05D006077 ORTHO05D007499 2.0e-23 114.0 83 68.7
FAN05G2137 Fragaria x ananassa HOM05D006077 ORTHO05D007499 2.6e-23 113.6 110 57.3
AagrBONN_evm.TU.Sc2ySwM_228.485 Anthoceros agrestis HOM05D006077 ORTHO05D007499 3.4e-23 113.2 83 68.7
Thhalv10021863m.g Eutrema salsugineum HOM05D006077 ORTHO05D007499 5.8e-23 112.5 69 79.7
Os06g0205000 Oryza sativa ssp. japonica HOM05D006077 ORTHO05D007499 7.5e-23 112.1 83 66.3
Pp3c4_29920 Physcomitrium patens HOM05D006077 ORTHO05D007499 7.5e-23 112.1 83 66.3
Nn4g24846 Nelumbo nucifera HOM05D006077 ORTHO05D007499 1.9e-21 107.5 75 73.3
Manes.04G144301 Manihot esculenta HOM05D006077 ORTHO05D007499 2.4e-21 107.1 81 64.2
unitig_699.g19648 Utricularia gibba HOM05D002868 ORTHO05D003477 1.0e-19 101.7 73 69.9
QL05p007703 Quercus lobata HOM05D006077 ORTHO05D007499 2.8e-17 93.6 64 71.9
vmacro15032 Vaccinium macrocarpon HOM05D006077 ORTHO05D007499 6.8e-16 89.0 64 71.9
CBR_g34185 Chara braunii HOM05D000019 ORTHO05D001702 2.0e-15 87.4 75 60.0
Duzib235G0120 Durio zibethinus HOM05D006077 ORTHO05D007499 2.6e-15 87.0 64 70.3
COL.COLO4_30761 Corchorus olitorius HOM05D006077 ORTHO05D007499 3.4e-15 86.7 64 70.3
CANSAT25G1718 Cannabis sativa HOM05D006077 ORTHO05D007499 4.4e-15 86.3 64 70.3
Oeu015484.1 Olea europaea HOM05D006077 ORTHO05D007499 4.4e-15 86.3 64 70.3
PGSC0003DMG400011604 Solanum tuberosum HOM05D006077 ORTHO05D007499 4.4e-15 86.3 45 82.2
FAN02G4125 Fragaria x ananassa HOM05D006077 ORTHO05D007499 5.8e-15 85.9 81 58.0
AUR62009882 Chenopodium quinoa HOM05D006077 ORTHO05D007499 1.3e-14 84.7 68 58.8
MCO16G375 Micromonas commoda HOM05D006077 ORTHO05D007499 1.3e-14 84.7 88 52.3
CARHR088790 Cardamine hirsuta HOM05D006077 ORTHO05D007499 1.7e-14 84.3 64 68.8
Duzib192G0164 Durio zibethinus HOM05D006077 ORTHO05D007499 2.9e-14 83.6 64 67.2
EL10Ac7g16407 Beta vulgaris HOM05D006077 ORTHO05D007499 6.4e-14 82.4 64 62.5
RcHm_v2.0_Chr5g0040601 Rosa chinensis HOM05D006077 ORTHO05D007499 6.4e-14 82.4 70 58.6
HPP92_019155 Vanilla planifolia HOM05D006077 ORTHO05D007499 2.4e-13 80.5 64 64.1
Sabra03G0038000 Salix brachista HOM05D006077 ORTHO05D007499 5.4e-13 79.3 64 62.5
SMO364G0450 Selaginella moellendorffii HOM05D006077 ORTHO05D007499 7.1e-13 79.0 84 48.8
PRCOL_00003774 Prasinoderma coloniale HOM05D006077 ORTHO05D007499 7.8e-12 75.5 83 47.0
SGA_v2.0_scaffold68G22862 Striga asiatica HOM05D011544 ORTHO05D010179 1.9e-10 70.9 43 86.0
SalBow7G3114 Salvia bowleyana HOM05D011544 ORTHO05D010179 5.3e-08 62.8 39 79.5
Solyc03g123420.1 Solanum lycopersicum HOM05D011544 ORTHO05D010179 3.4e-07 60.1 44 68.2
Sopen03g041200 Solanum pennellii HOM05D011544 ORTHO05D010179 3.4e-07 60.1 44 68.2
CSS0028385 Camellia sinensis var. sinensis HOM05D006077 ORTHO05D007499 4.4e-07 59.7 31 90.3
Cre12.g557000 Chlamydomonas reinhardtii HOM05D006077 ORTHO05D007499 4.4e-07 59.7 83 42.2
Oeu043661.1 Olea europaea HOM05D011544 ORTHO05D010179 4.4e-07 59.7 41 73.2
Peaxi162Scf00207g01425 Petunia axillaris HOM05D002498 ORTHO05D002553 5.8e-07 59.3 50 62.0
DCAR_016126 Daucus carota HOM05D011544 ORTHO05D010179 1.3e-06 58.2 41 65.9
Migut.I01074 Erythranthe guttata HOM05D011544 ORTHO05D010179 1.7e-06 57.8 42 66.7
Hma1.2p1_0291F.1_g115100 Hydrangea macrophylla HOM05D008345 ORTHO05D010179 3.8e-06 56.6 46 65.2
DCAR_022695 Daucus carota HOM05D011544 ORTHO05D010179 6.4e-06 55.8 43 60.5
Sopen06g022360 Solanum pennellii HOM05D011544 ORTHO05D010179 6.4e-06 55.8 42 66.7


User provided reference genes

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