Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold4G02009 Striga asiatica HOM05D003521 ORTHO05D000476 0.0e+00 1688.3 993 100.0
SGA_v2.0_scaffold68G22978 Striga asiatica HOM05D003521 ORTHO05D000476 0.0e+00 1322.8 995 80.8
Migut.D01015 Erythranthe guttata HOM05D003521 ORTHO05D000476 0.0e+00 1134.0 995 69.7
SalBow7G4780 Salvia bowleyana HOM05D003521 ORTHO05D000476 0.0e+00 1093.2 1018 67.5
Migut.I00939 Erythranthe guttata HOM05D003521 ORTHO05D000476 0.0e+00 1075.8 1026 65.7
MSTRG.22661 Avicennia marina HOM05D003521 ORTHO05D000476 1.7e-305 1052.7 995 68.3
Dinv30477 Davidia involucrata HOM05D003521 ORTHO05D000476 2.3e-294 1015.8 999 65.1
CSS0047293 Camellia sinensis var. sinensis HOM05D003521 ORTHO05D000476 1.7e-292 1009.6 1001 63.5
Hma1.2p1_1195F.1_g265855 Hydrangea macrophylla HOM05D003521 ORTHO05D000476 1.3e-289 1000.0 997 63.5
Nitab4.5_0010600g0010 Nicotiana tabacum HOM05D003521 ORTHO05D000476 2.5e-288 995.7 1042 61.7
Peaxi162Scf00207g01030 Petunia axillaris HOM05D003521 ORTHO05D000476 6.8e-286 987.6 1017 62.9
CSS0015824 Camellia sinensis var. sinensis HOM05D003521 ORTHO05D000476 2.7e-282 975.7 1017 62.4
Nitab4.5_0000351g0100 Nicotiana tabacum HOM05D003521 ORTHO05D000476 1.7e-281 973.0 1042 60.6
QL05p021582 Quercus lobata HOM05D003521 ORTHO05D000476 4.0e-278 961.8 1013 62.7
Duzib160G0549 Durio zibethinus HOM05D003521 ORTHO05D000476 1.2e-277 960.3 999 61.9
Actinidia21685 Actinidia chinensis HOM05D003521 ORTHO05D000476 5.7e-277 958.0 1022 61.7
Rhsim08G0223900 Rhododendron simsii HOM05D003521 ORTHO05D000476 2.2e-276 956.1 1016 61.0
RcHm_v2.0_Chr2g0139071 Rosa chinensis HOM05D003521 ORTHO05D000476 2.2e-276 956.1 1060 58.7
Thecc.06G092900 Theobroma cacao HOM05D003521 ORTHO05D000476 8.3e-276 954.1 1008 63.2
CiPaw.02G148500 Carya illinoinensis HOM05D003521 ORTHO05D000476 3.1e-275 952.2 1042 60.0
Cc04_g03000 Coffea canephora HOM05D003521 ORTHO05D000476 2.0e-274 949.5 998 63.0
Duzib235G1126 Durio zibethinus HOM05D003521 ORTHO05D000476 2.0e-274 949.5 997 62.3
CiPaw.01G235400 Carya illinoinensis HOM05D003521 ORTHO05D000476 3.8e-273 945.3 1012 61.4
GSVIVG01038690001 Vitis vinifera HOM05D003521 ORTHO05D000476 1.0e-270 937.2 995 62.0
Atru.chr1.3345 Acer truncatum HOM05D003521 ORTHO05D000476 2.4e-267 926.0 1005 62.1
Eucgr.F03041 Eucalyptus grandis HOM05D003521 ORTHO05D000476 3.2e-267 925.6 1011 59.7
unitig_62.g23765 Utricularia gibba HOM05D003521 ORTHO05D000476 4.1e-267 925.2 993 61.7
Lj3g0009081 Lotus japonicus HOM05D003521 ORTHO05D000476 7.0e-267 924.5 1021 59.7
vmacro18884 Vaccinium macrocarpon HOM05D003521 ORTHO05D000476 1.0e-265 920.6 1042 58.9
Thhalv10018077m.g Eutrema salsugineum HOM05D003521 ORTHO05D000476 1.7e-265 919.8 989 59.6
Phvul.005G169100 Phaseolus vulgaris HOM05D003521 ORTHO05D000476 3.9e-265 918.7 1028 60.2
Prupe.3G066400 Prunus persica HOM05D003521 ORTHO05D000476 3.9e-265 918.7 1027 59.9
AT1G79830 Arabidopsis thaliana HOM05D003521 ORTHO05D000476 6.6e-265 917.9 989 59.6
Sopen06g024880 Solanum pennellii HOM05D003521 ORTHO05D000476 6.6e-265 917.9 1037 59.2
THA.LOC104812525 Tarenaya hassleriana HOM05D003521 ORTHO05D000476 6.6e-265 917.9 1000 59.8
FvH4_6g31822 Fragaria vesca HOM05D003521 ORTHO05D000476 1.5e-264 916.8 1056 58.0
Lalb_Chr14g0373191 Lupinus albus HOM05D003521 ORTHO05D000476 1.5e-264 916.8 1022 58.5
Lalb_Chr24g0395951 Lupinus albus HOM05D003521 ORTHO05D000476 4.3e-264 915.2 1012 58.7
Carub.0002s2767 Capsella rubella HOM05D003521 ORTHO05D000476 5.6e-264 914.8 990 61.3
Ciclev10024803m.g Citrus clementina HOM05D003521 ORTHO05D000476 4.7e-263 911.8 995 60.7
Potri.003G052100 Populus trichocarpa HOM05D003521 ORTHO05D000476 8.0e-263 911.0 1004 59.3
TAR626G0208 Trochodendron aralioides HOM05D003521 ORTHO05D000476 1.0e-262 910.6 1000 59.6
VMungo1080G0951 Vigna mungo HOM05D003521 ORTHO05D000476 1.8e-262 909.8 1026 60.5
Dinv38015 Davidia involucrata HOM05D003521 ORTHO05D000476 3.4e-261 905.6 713 75.0
Ca_01135_v3 Cicer arietinum L. HOM05D003521 ORTHO05D000476 5.8e-261 904.8 1036 59.3
Sc18g0003130 Simmondsia chinensis HOM05D003521 ORTHO05D000476 3.7e-260 902.1 1007 61.7
FAN02G3342 Fragaria x ananassa HOM05D003521 ORTHO05D000476 4.9e-260 901.7 1050 56.5
AL2G41720 Arabidopsis lyrata HOM05D003521 ORTHO05D000476 8.3e-260 901.0 1002 58.5
Gohir.A10G081600 Gossypium hirsutum HOM05D003521 ORTHO05D000476 8.3e-260 901.0 995 59.8
MD09G1208900 Malus domestica HOM05D003521 ORTHO05D000476 1.1e-259 900.6 999 60.8
AUR62011668 Chenopodium quinoa HOM05D003521 ORTHO05D000476 1.9e-259 899.8 1012 58.3
Sp5g35930 Schrenkiella parvula HOM05D003521 ORTHO05D000476 4.1e-259 898.7 987 60.8
TWI12G1038 Tripterygium wilfordii HOM05D003521 ORTHO05D000476 7.0e-259 897.9 998 60.0
Potri.001G185050 Populus trichocarpa HOM05D003521 ORTHO05D000476 9.2e-259 897.5 1001 59.5
Lj9C509G5 Lonicera japonica HOM05D003521 ORTHO05D000476 1.6e-258 896.7 1065 56.9
Aqoxy7G01582 Aquilegia oxysepala HOM05D003521 ORTHO05D000476 2.0e-258 896.3 1005 58.9
FAN14G2596 Fragaria x ananassa HOM05D003521 ORTHO05D000476 2.0e-258 896.3 1047 56.8
Gohir.D10G069800 Gossypium hirsutum HOM05D003521 ORTHO05D000476 3.5e-258 895.6 988 59.9
Glyma.15G016700 Glycine max HOM05D003521 ORTHO05D000476 7.8e-258 894.4 1015 59.3
Gorai.011G074100 Gossypium raimondii HOM05D003521 ORTHO05D000476 7.8e-258 894.4 997 59.4
TWI18G0852 Tripterygium wilfordii HOM05D003521 ORTHO05D000476 1.0e-257 894.0 997 60.7
Solyc06g066610.4 Solanum lycopersicum HOM05D003521 ORTHO05D000476 2.3e-257 892.9 1038 58.0
Medtr2g101700 Medicago truncatula HOM05D003521 ORTHO05D000476 3.0e-257 892.5 1014 59.1
TAR383G0706 Trochodendron aralioides HOM05D003521 ORTHO05D000476 3.9e-257 892.1 992 58.8
Manes.11G037600 Manihot esculenta HOM05D003521 ORTHO05D000476 6.6e-257 891.3 1000 61.1
Hund00648 Selenicereus undatus HOM05D003521 ORTHO05D000476 1.1e-256 890.6 1038 59.5
Gohir.D05G131500 Gossypium hirsutum HOM05D003521 ORTHO05D000476 1.9e-256 889.8 997 59.2
FAN05G3380 Fragaria x ananassa HOM05D003521 ORTHO05D000476 9.5e-256 887.5 1054 56.1
Haze_16353 Corylus avellana HOM05D003521 ORTHO05D000476 1.2e-255 887.1 1163 53.7
Gorai.009G135200 Gossypium raimondii HOM05D003521 ORTHO05D000476 1.2e-255 887.1 997 59.3
Gohir.A05G132400 Gossypium hirsutum HOM05D003521 ORTHO05D000476 1.6e-255 886.7 996 59.6
HanXRQChr10g0313461 Helianthus annuus HOM05D003521 ORTHO05D000476 3.6e-255 885.6 1010 58.2
CANSAT56G3073 Cannabis sativa HOM05D003521 ORTHO05D000476 6.2e-255 884.8 1010 58.6
MD17G1190500 Malus domestica HOM05D003521 ORTHO05D000476 1.4e-254 883.6 996 61.3
PGR102G1144 Punica granatum HOM05D003521 ORTHO05D000476 2.3e-254 882.9 1000 58.3
CAN.G1152.8 Capsicum annuum HOM05D003521 ORTHO05D000476 1.5e-253 880.2 1024 57.7
Lsat_1_v5_gn_1_35300 Lactuca sativa HOM05D003521 ORTHO05D000476 1.5e-253 880.2 996 60.2
BolC6t38043H Brassica oleracea HOM05D003521 ORTHO05D000476 4.9e-252 875.2 1000 57.4
CARHR143590 Cardamine hirsuta HOM05D003521 ORTHO05D000476 1.1e-251 874.0 985 56.8
AUR62016491 Chenopodium quinoa HOM05D003521 ORTHO05D000476 1.1e-251 874.0 1010 58.6
C06p28740 Brassica napus HOM05D003521 ORTHO05D000476 4.1e-251 872.1 995 56.9
Nn2g11676 Nelumbo nucifera HOM05D003521 ORTHO05D000476 1.6e-250 870.2 1021 56.6
MELO3C023279.2 Cucumis melo HOM05D003521 ORTHO05D000476 2.7e-250 869.4 1033 58.2
A07p26350 Brassica napus HOM05D003521 ORTHO05D000476 3.5e-250 869.0 986 57.5
BraA07t30279Z Brassica rapa HOM05D003521 ORTHO05D000476 7.8e-250 867.8 989 57.7
COL.COLO4_30440 Corchorus olitorius HOM05D003521 ORTHO05D000476 1.0e-249 867.5 991 60.4
Aa31LG4G110 Aethionema arabicum HOM05D003521 ORTHO05D000476 1.7e-249 866.7 1027 57.1
Nn3g18099 Nelumbo nucifera HOM05D003521 ORTHO05D000476 2.3e-249 866.3 1002 57.2
Glyma.13G356900 Glycine max HOM05D003521 ORTHO05D000476 1.9e-248 863.2 1028 57.8
ECA234G0658 Erigeron canadensis HOM05D003521 ORTHO05D000476 1.4e-246 857.1 1009 58.7
Psat5g297520 Pisum sativum HOM05D003521 ORTHO05D000476 1.4e-246 857.1 1058 56.5
HanXRQChr04g0096181 Helianthus annuus HOM05D003521 ORTHO05D000476 5.2e-246 855.1 1006 57.2
Sed0003107 Sechium edule HOM05D003521 ORTHO05D000476 8.9e-246 854.4 1046 56.4
Sabra03G0027000 Salix brachista HOM05D003521 ORTHO05D000476 4.4e-245 852.0 1073 55.7
arahy.Tifrunner.gnm1.ann1.ZR40ID Arachis hypogaea HOM05D003521 ORTHO05D000476 2.9e-244 849.4 1029 55.4
PSO386G0042 Papaver somniferum HOM05D003521 ORTHO05D000476 5.4e-243 845.1 1019 56.2
ClCG02G000820 Citrullus lanatus HOM05D003521 ORTHO05D000476 2.3e-241 839.7 1049 55.4
DCAR_016209 Daucus carota HOM05D003521 ORTHO05D000476 2.3e-241 839.7 987 57.6
ECA247G0039 Erigeron canadensis HOM05D003521 ORTHO05D000476 2.8e-239 832.8 1027 54.3
HanXRQChr12g0360801 Helianthus annuus HOM05D003521 ORTHO05D000476 8.1e-239 831.2 1011 57.5
Sed0014905 Sechium edule HOM05D003521 ORTHO05D000476 4.0e-238 828.9 1043 55.9
Sabra01G0155200 Salix brachista HOM05D003521 ORTHO05D000476 6.9e-238 828.2 1019 58.0
arahy.Tifrunner.gnm1.ann1.A5WQDM Arachis hypogaea HOM05D003521 ORTHO05D000476 2.2e-236 823.2 1153 50.8
PSO210G6795 Papaver somniferum HOM05D003521 ORTHO05D000476 1.1e-235 820.8 1038 54.4
EL10Ac9g22035 Beta vulgaris HOM05D003521 ORTHO05D000476 1.9e-235 820.1 1004 55.3
CsaV3_2G017940 Cucumis sativus L. HOM05D003521 ORTHO05D000476 7.1e-235 818.1 1026 56.7
Lsat_1_v5_gn_5_130960 Lactuca sativa HOM05D003521 ORTHO05D000476 1.3e-233 813.9 994 57.8
arahy.Tifrunner.gnm1.ann1.60NISA Arachis hypogaea HOM05D003521 ORTHO05D000476 1.1e-230 804.3 1170 50.0
Actinidia24741 Actinidia chinensis HOM05D003521 ORTHO05D000476 4.5e-229 798.9 997 54.6
Lalb_Chr04g0262811 Lupinus albus HOM05D003521 ORTHO05D000476 1.6e-226 790.4 1046 51.5
Hund06634 Selenicereus undatus HOM05D003521 ORTHO05D000476 7.4e-224 781.6 1054 51.8
CDE02G1875 Ceratophyllum demersum HOM05D003521 ORTHO05D000476 8.4e-220 768.1 1016 53.1
arahy.Tifrunner.gnm1.ann1.M6JGC2 Arachis hypogaea HOM05D003521 ORTHO05D000476 5.5e-219 765.4 1030 53.3
ATR0315G089 Amborella trichopoda HOM05D003521 ORTHO05D000476 2.5e-216 756.5 1005 50.9
Zm00001eb295600 Zea mays HOM05D003521 ORTHO05D000476 6.2e-215 751.9 1050 49.0
Lj5C57T13 Lonicera japonica HOM05D003521 ORTHO05D000476 5.7e-208 728.8 1034 52.5
Os05g0559900 Oryza sativa ssp. japonica HOM05D003521 ORTHO05D000476 1.6e-202 710.7 1070 47.6
ECA232G1585 Erigeron canadensis HOM05D003521 ORTHO05D000142 2.2e-196 690.3 1003 50.8
SHI10997 Sapria himalayana HOM05D003521 ORTHO05D000476 7.4e-184 648.7 1101 44.3
Cpa.g.sc1513.1 Carica papaya HOM05D003521 ORTHO05D000476 1.2e-176 624.8 482 77.6
Mapoly0013s0180 Marchantia polymorpha HOM05D003521 ORTHO05D000476 1.6e-170 604.4 1034 44.0
HanXRQChr16g0500841 Helianthus annuus HOM05D003521 ORTHO05D000476 1.1e-163 581.6 903 47.0
Pp3c12_5050 Physcomitrium patens HOM05D003521 ORTHO05D000476 2.8e-162 577.0 1018 43.8
AagrBONN_evm.TU.Sc2ySwM_344.1927 Anthoceros agrestis HOM05D003521 ORTHO05D000476 1.8e-150 537.7 690 54.5
HPP92_003835 Vanilla planifolia HOM05D003521 ORTHO05D000476 1.8e-150 537.7 549 63.0
CDE08G0748 Ceratophyllum demersum HOM05D003521 ORTHO05D000476 3.3e-147 526.9 796 49.6
Pp3c4_15860 Physcomitrium patens HOM05D003521 ORTHO05D000476 4.6e-133 479.9 849 43.5
Zm00001eb343520 Zea mays HOM05D003521 ORTHO05D000476 9.3e-110 402.5 403 60.5
CBR_g16051 Chara braunii HOM05D003521 ORTHO05D000476 6.9e-105 386.3 1037 34.4
Oeu024073.1 Olea europaea HOM05D003521 ORTHO05D000476 4.3e-91 340.5 530 46.2
unitig_46.g18558 Utricularia gibba HOM05D003521 ORTHO05D000476 9.1e-81 306.2 430 49.5
CAN.G395.28 Capsicum annuum HOM05D003521 ORTHO05D000476 7.5e-59 233.4 346 50.0
Ca_01143_v3 Cicer arietinum L. HOM05D003521 ORTHO05D000476 2.0e-56 225.3 315 52.4
TPR.G5155 Trifolium pratense HOM05D003521 ORTHO05D000476 1.3e-50 206.1 137 84.7
Lsat_1_v5_gn_4_102620 Lactuca sativa HOM05D003521 ORTHO05D000476 3.7e-50 204.5 158 75.9
Oeu024072.1 Olea europaea HOM05D003521 ORTHO05D000476 4.1e-49 201.1 395 39.7
CDE08G0544 Ceratophyllum demersum HOM05D003521 ORTHO05D000476 9.1e-49 199.9 202 60.9
Cre03.g187000 Chlamydomonas reinhardtii HOM05D003521 ORTHO05D000476 1.7e-42 179.1 326 41.4
PRCOL_00000677 Prasinoderma coloniale HOM05D003521 ORTHO05D000476 3.8e-39 167.9 644 30.1
Zm00001eb343530 Zea mays HOM05D003521 ORTHO05D000476 1.2e-35 156.4 504 31.0
CAN.G135.35 Capsicum annuum HOM05D003521 ORTHO05D000476 5.8e-35 154.1 193 53.9
Lsat_1_v5_gn_4_178240 Lactuca sativa HOM05D003521 ORTHO05D000476 4.9e-34 151.0 120 75.8
SMO298G0028 Selaginella moellendorffii HOM05D003521 ORTHO05D000476 6.4e-34 150.6 369 34.1
Cpa.g.c29821 Carica papaya HOM05D003521 ORTHO05D000476 1.9e-30 139.0 90 84.4
Ca_25389_v3 Cicer arietinum L. HOM05D003521 ORTHO05D000476 1.9e-30 139.0 236 47.5
Dinv38016 Davidia involucrata HOM05D003521 ORTHO05D000476 8.0e-29 133.7 117 64.1
HanXRQChr16g0500831 Helianthus annuus HOM05D003521 ORTHO05D000476 1.8e-28 132.5 87 82.8
SEGI_27505 Sequoiadendron giganteum HOM05D003521 ORTHO05D000476 3.1e-28 131.7 456 30.3
MELO3C034685.2 Cucumis melo HOM05D003521 ORTHO05D000476 2.6e-27 128.6 88 75.0
CARHR143550 Cardamine hirsuta HOM05D003521 ORTHO05D000476 1.1e-25 123.2 93 73.1
Lsat_1_v5_gn_4_102580 Lactuca sativa HOM05D003521 ORTHO05D000476 1.9e-25 122.5 442 31.4
arahy.Tifrunner.gnm1.ann1.J2PPD0 Arachis hypogaea HOM05D003521 ORTHO05D000476 5.4e-25 120.9 99 72.7
TPR.G19044 Trifolium pratense HOM05D003521 ORTHO05D000476 1.6e-24 119.4 78 84.6
Actinidia32725 Actinidia chinensis HOM05D003521 ORTHO05D000476 2.1e-24 119.0 108 64.8
Cpa.g.c33209.1 Carica papaya HOM05D003521 ORTHO05D000476 2.1e-24 119.0 405 32.6
MCO14G500 Micromonas commoda HOM05D003521 ORTHO05D000476 1.5e-22 112.8 609 29.4
AagrBONN_evm.TU.Sc2ySwM_344.1934 Anthoceros agrestis HOM05D003521 ORTHO05D000476 5.6e-22 110.9 363 29.8
CBR_g37651 Chara braunii HOM05D003521 ORTHO05D000476 1.6e-21 109.4 665 25.9
Medtr2g043010 Medicago truncatula HOM05D003521 ORTHO05D000476 6.2e-21 107.5 134 55.2
HanXRQChr11g0325911 Helianthus annuus HOM05D003521 ORTHO05D000476 1.1e-20 106.7 84 69.0
arahy.Tifrunner.gnm1.ann1.SA7FDN Arachis hypogaea HOM05D003521 ORTHO05D000476 1.8e-20 105.9 63 87.3
Mapoly0111s0038 Marchantia polymorpha HOM05D003521 ORTHO05D000476 5.2e-20 104.4 649 26.2
Ca_31247_v3 Cicer arietinum L. HOM05D003521 ORTHO05D000476 8.9e-20 103.6 75 78.7
unitig_52.g17085 Utricularia gibba HOM05D003521 ORTHO05D000476 4.4e-19 101.3 153 47.7
Lsat_1_v5_gn_4_102600 Lactuca sativa HOM05D003521 ORTHO05D000476 3.2e-17 95.1 74 73.0
Lsat_1_v5_gn_2_62580 Lactuca sativa HOM05D003521 ORTHO05D000476 9.2e-17 93.6 60 88.3
Ca_16259_v3 Cicer arietinum L. HOM05D001034 ORTHO05D000476 1.1e-14 86.7 73 68.5
CARHR212390 Cardamine hirsuta HOM05D003521 ORTHO05D000476 1.5e-14 86.3 97 57.7
BolC1t05061H Brassica oleracea HOM05D003521 ORTHO05D000476 1.6e-13 82.8 73 64.4
TPR.G7293 Trifolium pratense HOM05D003521 ORTHO05D000476 3.6e-13 81.6 146 44.5
Ca_25015_v3 Cicer arietinum L. HOM05D003521 ORTHO05D000476 1.1e-12 80.1 62 75.8
PSO596G0006 Papaver somniferum HOM05D003521 ORTHO05D000476 1.4e-12 79.7 65 69.2
PSO596G0043 Papaver somniferum HOM05D003521 ORTHO05D000476 1.4e-12 79.7 65 69.2
C09p10740 Brassica napus HOM05D003521 ORTHO05D000476 4.9e-10 71.2 72 59.7
HanXRQChr07g0187491 Helianthus annuus HOM05D003521 ORTHO05D000476 9.2e-09 67.0 79 53.2
HanXRQChr01g0011031 Helianthus annuus HOM05D003521 ORTHO05D000476 2.7e-08 65.5 45 77.8
AagrBONN_evm.TU.Sc2ySwM_344.1936 Anthoceros agrestis HOM05D003521 ORTHO05D000476 4.6e-08 64.7 143 37.1
Thecc.08G046800 Theobroma cacao HOM05D003521 ORTHO05D000476 3.0e-07 62.0 71 54.9
Cfa026401 Carpinus fangiana HOM05D003521 ORTHO05D000476 1.5e-06 59.7 714 23.9
Dinv23957 Davidia involucrata HOM05D038150 ORTHO05D000476 1.5e-06 59.7 91 44.0


User provided reference genes

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