Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold4G01962 Striga asiatica HOM05D006444 ORTHO05D007748 4.0e-229 797.7 401 100.0
MSTRG.20391 Avicennia marina HOM05D006444 ORTHO05D007748 2.1e-121 439.9 339 67.6
Migut.B00986 Erythranthe guttata HOM05D006444 ORTHO05D007748 4.7e-121 438.7 351 66.7
SalBow7G4019 Salvia bowleyana HOM05D006444 ORTHO05D007748 8.1e-97 358.2 334 58.1
Dinv30860 Davidia involucrata HOM05D006444 ORTHO05D007748 1.0e-91 341.3 343 56.0
Oeu028007.2 Olea europaea HOM05D006444 ORTHO05D007748 8.7e-91 338.2 361 53.5
Oeu045894.1 Olea europaea HOM05D006444 ORTHO05D007748 1.9e-90 337.0 337 54.6
vmacro01541 Vaccinium macrocarpon HOM05D006444 ORTHO05D007748 2.1e-84 317.0 341 52.2
Rhsim11G0093000 Rhododendron simsii HOM05D006444 ORTHO05D007748 2.7e-84 316.6 332 53.6
DCAR_025267 Daucus carota HOM05D006444 ORTHO05D007748 1.8e-83 313.9 341 51.3
unitig_46.g18373 Utricularia gibba HOM05D006444 ORTHO05D007748 6.7e-83 312.0 335 51.9
Prupe.6G316100 Prunus persica HOM05D006444 ORTHO05D007748 1.9e-82 310.5 343 51.3
Haze_04092 Corylus avellana HOM05D006444 ORTHO05D007748 2.8e-81 306.6 343 50.4
Nitab4.5_0014337g0020 Nicotiana tabacum HOM05D006444 ORTHO05D007748 2.8e-81 306.6 335 52.5
CSS0047685 Camellia sinensis var. sinensis HOM05D006444 ORTHO05D007748 3.7e-81 306.2 344 48.3
Potri.005G020600 Populus trichocarpa HOM05D006444 ORTHO05D007748 6.2e-81 305.4 342 50.6
Sabra05G0026600 Salix brachista HOM05D006444 ORTHO05D007748 8.1e-81 305.1 344 49.7
CiPaw.07G026800 Carya illinoinensis HOM05D006444 ORTHO05D007748 1.8e-80 303.9 342 49.1
Peaxi162Scf00073g00128 Petunia axillaris HOM05D006444 ORTHO05D007748 3.4e-79 299.7 335 51.9
Nitab4.5_0002715g0070 Nicotiana tabacum HOM05D006444 ORTHO05D007748 4.5e-79 299.3 334 51.5
GSVIVG01031202001 Vitis vinifera HOM05D006444 ORTHO05D007748 1.7e-78 297.4 330 50.9
Ciclev10001747m.g Citrus clementina HOM05D006444 ORTHO05D007748 2.2e-78 297.0 336 48.2
Hund21734 Selenicereus undatus HOM05D006444 ORTHO05D007748 6.5e-78 295.4 345 48.4
Manes.09G174800 Manihot esculenta HOM05D006444 ORTHO05D007748 1.8e-75 287.3 342 47.7
TAR365G0240 Trochodendron aralioides HOM05D006444 ORTHO05D007748 1.8e-75 287.3 366 48.9
Atru.chr2.132 Acer truncatum HOM05D006444 ORTHO05D007748 3.0e-75 286.6 334 49.7
Hma1.2p1_0472F.1_g159820 Hydrangea macrophylla HOM05D006444 ORTHO05D007748 3.0e-75 286.6 358 48.3
Cc10_g14110 Coffea canephora HOM05D006444 ORTHO05D007748 5.1e-75 285.8 326 50.3
QL03p017976 Quercus lobata HOM05D006444 ORTHO05D007748 5.1e-75 285.8 334 48.8
Sopen01g043670 Solanum pennellii HOM05D006444 ORTHO05D007748 8.7e-75 285.0 338 50.0
Eucgr.H03280 Eucalyptus grandis HOM05D006444 ORTHO05D007748 1.9e-74 283.9 347 49.0
arahy.Tifrunner.gnm1.ann1.I0464U Arachis hypogaea HOM05D006444 ORTHO05D007748 2.8e-73 280.0 335 47.8
Thecc.05G319500 Theobroma cacao HOM05D006444 ORTHO05D007748 3.7e-73 279.6 341 47.8
PGSC0003DMG400024779 Solanum tuberosum HOM05D006444 ORTHO05D007748 5.3e-72 275.8 359 47.4
arahy.Tifrunner.gnm1.ann1.T18680 Arachis hypogaea HOM05D006444 ORTHO05D007748 9.0e-72 275.0 335 47.2
Phvul.001G226600 Phaseolus vulgaris HOM05D006444 ORTHO05D007748 1.2e-71 274.6 339 46.9
VMungo1383G3166 Vigna mungo HOM05D006444 ORTHO05D007748 2.0e-71 273.9 339 46.3
Lalb_Chr18g0045971 Lupinus albus HOM05D006444 ORTHO05D007748 2.6e-71 273.5 335 47.2
CAN.G1273.16 Capsicum annuum HOM05D006444 ORTHO05D007748 3.4e-71 273.1 365 45.2
Lsat_1_v5_gn_7_73840 Lactuca sativa HOM05D006444 ORTHO05D007748 5.9e-71 272.3 332 45.5
COL.COLO4_04127 Corchorus olitorius HOM05D006444 ORTHO05D007748 1.3e-70 271.2 341 45.7
PGR031G3221 Punica granatum HOM05D006444 ORTHO05D007748 1.7e-70 270.8 337 45.7
Gohir.A08G207200 Gossypium hirsutum HOM05D006444 ORTHO05D007748 3.8e-70 269.6 340 46.5
ECA236G3124 Erigeron canadensis HOM05D006444 ORTHO05D007748 5.0e-70 269.2 332 46.1
ClCG03G017520 Citrullus lanatus HOM05D006444 ORTHO05D007748 6.5e-70 268.9 334 47.0
Medtr7g112320 Medicago truncatula HOM05D006444 ORTHO05D007748 1.1e-69 268.1 338 44.1
CDE09G1197 Ceratophyllum demersum HOM05D006444 ORTHO05D007748 1.4e-69 267.7 206 64.1
Ca_09322_v3 Cicer arietinum L. HOM05D006444 ORTHO05D007748 1.4e-69 267.7 339 46.0
EL10Ac4g09842 Beta vulgaris HOM05D006444 ORTHO05D007748 2.5e-69 266.9 345 45.2
Sed0009356 Sechium edule HOM05D006444 ORTHO05D007748 4.2e-69 266.2 354 45.8
Lj1g0016861 Lotus japonicus HOM05D006444 ORTHO05D007748 9.3e-69 265.0 348 43.7
Nn4g25689 Nelumbo nucifera HOM05D006444 ORTHO05D007748 1.2e-68 264.6 351 47.0
Glyma.03G233000 Glycine max HOM05D006444 ORTHO05D007748 3.6e-68 263.1 333 46.5
Glyma.19G230000 Glycine max HOM05D006444 ORTHO05D007748 6.1e-68 262.3 337 46.6
Cpa.g.sc48.132 Carica papaya HOM05D006444 ORTHO05D007748 1.0e-67 261.5 381 41.7
MELO3C015276.2 Cucumis melo HOM05D006444 ORTHO05D007748 2.3e-67 260.4 329 46.5
CsaV3_1G038500 Cucumis sativus L. HOM05D006444 ORTHO05D007748 3.9e-67 259.6 339 46.9
Gorai.004G237700 Gossypium raimondii HOM05D006444 ORTHO05D007748 5.1e-67 259.2 340 45.0
TWI56G1276 Tripterygium wilfordii HOM05D006444 ORTHO05D007748 5.1e-67 259.2 342 46.5
TPR.G1652 Trifolium pratense HOM05D006444 ORTHO05D007748 6.7e-67 258.8 343 44.6
Lj5A342G70 Lonicera japonica HOM05D006444 ORTHO05D007748 2.5e-66 256.9 255 56.1
CANSAT54G2069 Cannabis sativa HOM05D006444 ORTHO05D007748 3.3e-66 256.5 254 54.7
Gohir.D08G223800 Gossypium hirsutum HOM05D006444 ORTHO05D007748 3.3e-66 256.5 340 44.7
Phvul.007G199800 Phaseolus vulgaris HOM05D006444 ORTHO05D007748 5.7e-66 255.8 343 43.4
RcHm_v2.0_Chr3g0456691 Rosa chinensis HOM05D006444 ORTHO05D007748 1.6e-65 254.2 332 43.7
FAN05G1290 Fragaria x ananassa HOM05D006444 ORTHO05D007748 4.8e-65 252.7 322 44.4
HanXRQChr15g0495151 Helianthus annuus HOM05D006444 ORTHO05D007748 6.3e-65 252.3 334 44.0
FAN14G0724 Fragaria x ananassa HOM05D006444 ORTHO05D007748 8.2e-65 251.9 323 45.8
FvH4_6g07110 Fragaria vesca HOM05D006444 ORTHO05D007748 3.1e-64 250.0 323 45.5
Nn3g21596 Nelumbo nucifera HOM05D006444 ORTHO05D007748 5.3e-64 249.2 355 44.8
THA.LOC104818740 Tarenaya hassleriana HOM05D006444 ORTHO05D007748 5.3e-64 249.2 326 44.2
ATR0706G081 Amborella trichopoda HOM05D006444 ORTHO05D007748 1.2e-63 248.1 238 54.6
VMungo0720G1741 Vigna mungo HOM05D006444 ORTHO05D007748 3.4e-63 246.5 345 40.3
FAN02G1429 Fragaria x ananassa HOM05D006444 ORTHO05D007748 1.7e-62 244.2 322 43.8
AUR62005256 Chenopodium quinoa HOM05D006444 ORTHO05D007748 5.5e-61 239.2 253 50.6
Glyma.10G148900 Glycine max HOM05D006444 ORTHO05D007748 9.4e-61 238.4 343 40.8
PSO170G3086 Papaver somniferum HOM05D006444 ORTHO05D007748 1.2e-60 238.0 351 42.7
PSO357G0038 Papaver somniferum HOM05D006444 ORTHO05D007748 1.6e-60 237.7 351 42.5
AUR62000705 Chenopodium quinoa HOM05D006444 ORTHO05D007748 2.7e-60 236.9 288 47.2
Ciclev10005435m.g Citrus clementina HOM05D006444 ORTHO05D007748 1.4e-59 234.6 339 45.4
CDE02G1332 Ceratophyllum demersum HOM05D006444 ORTHO05D007748 3.9e-59 233.0 187 62.6
Aqoxy2G02847 Aquilegia oxysepala HOM05D006444 ORTHO05D007748 2.0e-58 230.7 341 41.9
Prupe.1G126500 Prunus persica HOM05D006444 ORTHO05D007748 6.9e-56 222.2 197 56.3
Sp2g21090 Schrenkiella parvula HOM05D006444 ORTHO05D007748 1.2e-55 221.5 346 39.6
Os03g0301400 Oryza sativa ssp. japonica HOM05D006444 ORTHO05D007748 2.6e-55 220.3 199 54.3
HPP92_011867 Vanilla planifolia HOM05D006444 ORTHO05D007748 2.6e-55 220.3 254 46.5
AL6G38850 Arabidopsis lyrata HOM05D006444 ORTHO05D007748 5.9e-55 219.2 328 42.1
Thhalv10004624m.g Eutrema salsugineum HOM05D006444 ORTHO05D007748 7.7e-55 218.8 328 41.5
Zm00001eb014130 Zea mays HOM05D006444 ORTHO05D007748 1.3e-54 218.0 315 41.9
Carub.0006s2458 Capsella rubella HOM05D006444 ORTHO05D007748 3.8e-54 216.5 331 41.1
CARHR186630 Cardamine hirsuta HOM05D006444 ORTHO05D007748 3.8e-54 216.5 348 39.7
Duzib151G0636 Durio zibethinus HOM05D006444 ORTHO05D007748 6.5e-54 215.7 329 42.2
BolC7t44660H Brassica oleracea HOM05D006444 ORTHO05D007748 8.5e-54 215.3 347 39.5
Thecc.04G293900 Theobroma cacao HOM05D006444 ORTHO05D007748 1.4e-53 214.5 346 40.8
A06p37110 Brassica napus HOM05D006444 ORTHO05D007748 1.9e-53 214.2 347 39.5
BraA06t26637Z Brassica rapa HOM05D006444 ORTHO05D007748 1.9e-53 214.2 347 39.5
RcHm_v2.0_Chr4g0424201 Rosa chinensis HOM05D006444 ORTHO05D007748 9.4e-53 211.8 191 58.1
Hund21730 Selenicereus undatus HOM05D006444 ORTHO05D007748 2.1e-52 210.7 228 51.3
Aa31LG11G9750 Aethionema arabicum HOM05D006444 ORTHO05D007748 1.0e-51 208.4 328 41.2
Sc16g0008870 Simmondsia chinensis HOM05D006444 ORTHO05D007748 3.9e-51 206.5 295 44.1
AT5G26940 Arabidopsis thaliana HOM05D006444 ORTHO05D007748 6.7e-51 205.7 328 39.6
Psat3g013840 Pisum sativum HOM05D006444 ORTHO05D007748 8.8e-51 205.3 283 43.1
C07p41320 Brassica napus HOM05D006444 ORTHO05D007748 2.2e-49 200.7 372 36.8
MD13G1159900 Malus domestica HOM05D006444 ORTHO05D007748 1.4e-48 198.0 197 51.8
Os04g0623400 Oryza sativa ssp. japonica HOM05D006444 ORTHO05D007748 5.0e-46 189.5 205 48.8
Mapoly0162s0013 Marchantia polymorpha HOM05D006444 ORTHO05D007748 8.8e-43 178.7 198 48.0
MBI19_g14287_MAGBIO Magnolia biondii HOM05D006444 ORTHO05D007748 4.4e-42 176.4 253 43.5
AagrBONN_evm.TU.Sc2ySwM_344.4230 Anthoceros agrestis HOM05D006444 ORTHO05D007748 7.5e-42 175.6 194 48.5
FAN07G1328 Fragaria x ananassa HOM05D006444 ORTHO05D007748 6.3e-41 172.6 199 45.7
FvH4_4g19220 Fragaria vesca HOM05D006444 ORTHO05D007748 5.9e-39 166.0 198 43.9
SEGI_10576 Sequoiadendron giganteum HOM05D006444 ORTHO05D007748 8.5e-38 162.2 150 54.7
FAN12G0061 Fragaria x ananassa HOM05D006444 ORTHO05D007748 4.7e-36 156.4 199 44.2
SMO116G0265 Selaginella moellendorffii HOM05D006444 ORTHO05D007748 1.4e-35 154.8 184 45.1
FAN12G3514 Fragaria x ananassa HOM05D006444 ORTHO05D007748 4.0e-35 153.3 198 41.9
Pp3c18_14120 Physcomitrium patens HOM05D001061 ORTHO05D007748 1.5e-34 151.4 204 40.2
MD12G1209000 Malus domestica HOM05D006444 ORTHO05D007748 1.3e-33 148.3 121 58.7
FAN09G3591 Fragaria x ananassa HOM05D006444 ORTHO05D007748 2.9e-30 137.1 124 54.0
Actinidia35534 Actinidia chinensis HOM05D006444 ORTHO05D007748 1.1e-29 135.2 222 38.7
MD12G1208900 Malus domestica HOM05D006444 ORTHO05D007748 1.5e-29 134.8 217 42.9
Atru.chr4.2940 Acer truncatum HOM05D006444 ORTHO05D007748 1.4e-27 128.3 121 52.9
TAR362G0047 Trochodendron aralioides HOM05D006444 ORTHO05D007748 3.7e-25 120.2 234 38.0
MCO01G157 Micromonas commoda HOM05D005236 ORTHO05D006557 5.9e-23 112.8 185 36.2
EL10Ac4g09387 Beta vulgaris HOM05D006444 ORTHO05D007748 1.2e-15 88.6 81 58.0
PRCOL_00002449 Prasinoderma coloniale HOM05D005236 ORTHO05D006557 4.6e-15 86.7 205 32.2
Actinidia35535 Actinidia chinensis HOM05D006444 ORTHO05D007748 1.0e-14 85.5 76 57.9
SEGI_25648 Sequoiadendron giganteum HOM05D006444 ORTHO05D007748 1.0e-06 58.9 110 38.2


User provided reference genes

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