Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold49G18283 Striga asiatica HOM05D003743 ORTHO05D004311 3.7e-171 604.7 296 100.0
Lsat_1_v5_gn_2_40361 Lactuca sativa HOM05D003743 ORTHO05D004311 3.5e-28 129.8 375 28.3
Oeu050830.1 Olea europaea HOM05D003743 ORTHO05D004311 1.7e-27 127.5 371 27.8
HanXRQChr10g0285841 Helianthus annuus HOM05D003743 ORTHO05D004311 2.2e-27 127.1 380 27.6
Migut.M01180 Erythranthe guttata HOM05D003743 ORTHO05D004311 1.1e-26 124.8 383 26.9
SGA_v2.0_scaffold100G29640 Striga asiatica HOM05D003743 ORTHO05D004311 1.1e-26 124.8 390 26.4
Ciclev10028000m.g Citrus clementina HOM05D003743 ORTHO05D004311 1.9e-26 124.0 387 27.4
CAN.G1627.16 Capsicum annuum HOM05D003743 ORTHO05D004311 3.2e-26 123.2 384 26.6
Duzib235G1026 Durio zibethinus HOM05D003743 ORTHO05D004311 3.2e-26 123.2 390 26.2
Peaxi162Scf00379g00092 Petunia axillaris HOM05D003743 ORTHO05D004311 3.2e-26 123.2 390 27.2
SalBow8G3648 Salvia bowleyana HOM05D003743 ORTHO05D004311 9.4e-26 121.7 139 43.9
Lj8P171T25 Lonicera japonica HOM05D003743 ORTHO05D004311 1.6e-25 120.9 389 26.7
Thecc.06G191600 Theobroma cacao HOM05D003743 ORTHO05D004311 2.7e-25 120.2 389 26.2
Nitab4.5_0003668g0110 Nicotiana tabacum HOM05D003743 ORTHO05D004311 6.1e-25 119.0 390 26.4
COL.COLO4_31510 Corchorus olitorius HOM05D003743 ORTHO05D004311 1.8e-24 117.5 385 26.8
CSS0028072 Camellia sinensis var. sinensis HOM05D003743 ORTHO05D004311 6.8e-24 115.5 140 43.6
Duzib160G0164 Durio zibethinus HOM05D003743 ORTHO05D004311 6.8e-24 115.5 387 26.1
Solyc02g078580.1 Solanum lycopersicum HOM05D003743 ORTHO05D004311 6.8e-24 115.5 386 26.4
Sopen02g023440 Solanum pennellii HOM05D003743 ORTHO05D004311 6.8e-24 115.5 386 26.4
ATR0763G146 Amborella trichopoda HOM05D003743 ORTHO05D004311 8.8e-24 115.2 380 26.3
Hma1.2p1_0126F.1_g059170 Hydrangea macrophylla HOM05D003743 ORTHO05D004311 8.8e-24 115.2 395 26.3
CiPaw.10G046600 Carya illinoinensis HOM05D003743 ORTHO05D004311 1.2e-23 114.8 133 43.6
Cc02_g12930 Coffea canephora HOM05D003743 ORTHO05D004311 1.2e-23 114.8 140 43.6
Gohir.D10G024500 Gossypium hirsutum HOM05D003743 ORTHO05D004311 1.2e-23 114.8 136 44.1
PGSC0003DMG400022434 Solanum tuberosum HOM05D003743 ORTHO05D004311 1.2e-23 114.8 135 43.0
Dinv07531 Davidia involucrata HOM05D003743 ORTHO05D004311 1.5e-23 114.4 132 45.5
Sc05g0007850 Simmondsia chinensis HOM05D003743 ORTHO05D004311 1.5e-23 114.4 374 25.9
Gorai.011G025800 Gossypium raimondii HOM05D003743 ORTHO05D004311 2.0e-23 114.0 136 44.1
Nitab4.5_0003347g0010 Nicotiana tabacum HOM05D003743 ORTHO05D004311 2.0e-23 114.0 135 42.2
CSS0027200 Camellia sinensis var. sinensis HOM05D003743 ORTHO05D004311 2.6e-23 113.6 388 26.5
FAN09G3903 Fragaria x ananassa HOM05D003743 ORTHO05D004311 2.6e-23 113.6 391 26.1
Glyma.07G194200 Glycine max HOM05D003743 ORTHO05D004311 2.6e-23 113.6 389 26.7
Gohir.A10G023800 Gossypium hirsutum HOM05D003743 ORTHO05D004311 2.6e-23 113.6 136 43.4
Manes.16G024900 Manihot esculenta HOM05D003743 ORTHO05D004311 2.6e-23 113.6 133 42.9
FAN14G3620 Fragaria x ananassa HOM05D003743 ORTHO05D004311 3.4e-23 113.2 391 25.8
FAN16G2290 Fragaria x ananassa HOM05D003743 ORTHO05D004311 3.4e-23 113.2 391 25.8
Prupe.6G309900 Prunus persica HOM05D003743 ORTHO05D004311 3.4e-23 113.2 133 44.4
PGR042G1300 Punica granatum HOM05D003743 ORTHO05D004311 3.4e-23 113.2 132 44.7
RcHm_v2.0_Chr3g0457571 Rosa chinensis HOM05D003743 ORTHO05D004311 3.4e-23 113.2 391 26.6
Prupe.3G050300 Prunus persica HOM05D003743 ORTHO05D004311 4.4e-23 112.8 476 24.2
TPR.G12063 Trifolium pratense HOM05D003743 ORTHO05D004311 4.4e-23 112.8 135 40.7
Phvul.002G226300 Phaseolus vulgaris HOM05D003743 ORTHO05D004311 5.7e-23 112.5 391 26.1
FAN03G0627 Fragaria x ananassa HOM05D003743 ORTHO05D004311 7.5e-23 112.1 391 25.6
QL05p039342 Quercus lobata HOM05D003743 ORTHO05D004311 7.5e-23 112.1 393 24.4
QL10p057179 Quercus lobata HOM05D003743 ORTHO05D004311 7.5e-23 112.1 393 24.4
unitig_748.g8020 Utricularia gibba HOM05D003743 ORTHO05D004311 7.5e-23 112.1 135 44.4
CDE02G2043 Ceratophyllum demersum HOM05D003743 ORTHO05D004311 9.8e-23 111.7 391 26.1
Actinidia05611 Actinidia chinensis HOM05D003743 ORTHO05D004311 1.3e-22 111.3 137 43.1
Aa31LG2G9550 Aethionema arabicum HOM05D003743 ORTHO05D004311 1.3e-22 111.3 135 40.0
VMungo0251G3484 Vigna mungo HOM05D003743 ORTHO05D004311 1.3e-22 111.3 389 26.0
FAN05G4405 Fragaria x ananassa HOM05D003743 ORTHO05D004311 1.7e-22 110.9 391 25.8
FvH4_3g04783 Fragaria vesca HOM05D003743 ORTHO05D004311 2.2e-22 110.5 391 25.6
MD10G1061800 Malus domestica HOM05D003743 ORTHO05D004311 2.2e-22 110.5 132 43.2
Ca_25733_v3 Cicer arietinum L. HOM05D003743 ORTHO05D004311 2.8e-22 110.2 135 40.7
MELO3C017564.2 Cucumis melo HOM05D003743 ORTHO05D004311 2.8e-22 110.2 194 36.1
ECA240G0220 Erigeron canadensis HOM05D003743 ORTHO05D004311 2.8e-22 110.2 379 27.2
FAN21G0113 Fragaria x ananassa HOM05D003743 ORTHO05D004311 2.8e-22 110.2 391 25.3
MBI04_g36401_MAGBIO Magnolia biondii HOM05D003743 ORTHO05D004311 2.8e-22 110.2 382 24.6
Atru.chr7.2377 Acer truncatum HOM05D003743 ORTHO05D004311 4.8e-22 109.4 133 41.4
CsaV3_4G005020 Cucumis sativus L. HOM05D003743 ORTHO05D004311 4.8e-22 109.4 194 35.6
Glyma.13G182500 Glycine max HOM05D003743 ORTHO05D004311 4.8e-22 109.4 389 25.7
CANSAT35G0257 Cannabis sativa HOM05D003743 ORTHO05D004311 6.3e-22 109.0 134 42.5
Lalb_Chr05g0218341 Lupinus albus HOM05D003743 ORTHO05D004311 6.3e-22 109.0 387 24.8
TAR627G0572 Trochodendron aralioides HOM05D003743 ORTHO05D004311 6.3e-22 109.0 396 26.0
AUR62016972 Chenopodium quinoa HOM05D003743 ORTHO05D004311 8.3e-22 108.6 354 25.4
Eucgr.E03353 Eucalyptus grandis HOM05D003743 ORTHO05D004311 8.3e-22 108.6 134 41.0
Lj1g0019037 Lotus japonicus HOM05D003743 ORTHO05D004311 8.3e-22 108.6 135 41.5
MBI16_g34925_MAGBIO Magnolia biondii HOM05D003743 ORTHO05D004311 8.3e-22 108.6 372 25.8
RcHm_v2.0_Chr5g0007801 Rosa chinensis HOM05D003743 ORTHO05D004311 8.3e-22 108.6 391 25.1
SHI01836 Sapria himalayana HOM05D003743 ORTHO05D004311 8.3e-22 108.6 133 43.6
THA.LOC104819165 Tarenaya hassleriana HOM05D003743 ORTHO05D004311 8.3e-22 108.6 219 32.4
Carub.0002s0416 Capsella rubella HOM05D003743 ORTHO05D004311 1.1e-21 108.2 135 39.3
DCAR_004097 Daucus carota HOM05D003743 ORTHO05D004311 1.1e-21 108.2 131 42.7
FAN14G1138 Fragaria x ananassa HOM05D003743 ORTHO05D004311 1.1e-21 108.2 391 25.6
AL2G15400 Arabidopsis lyrata HOM05D003743 ORTHO05D004311 1.4e-21 107.8 135 40.7
FvH4_6g03621 Fragaria vesca HOM05D003743 ORTHO05D004311 1.4e-21 107.8 128 43.8
Medtr7g099060 Medicago truncatula HOM05D003743 ORTHO05D004311 1.4e-21 107.8 383 26.6
Rhsim07G0025200 Rhododendron simsii HOM05D003743 ORTHO05D004311 1.4e-21 107.8 139 41.0
Haze_06507 Corylus avellana HOM05D003743 ORTHO05D004311 1.8e-21 107.5 391 25.3
DCAR_008049 Daucus carota HOM05D003743 ORTHO05D004311 1.8e-21 107.5 399 24.8
RhsimUnG0044100 Rhododendron simsii HOM05D003743 ORTHO05D004311 1.8e-21 107.5 139 41.0
Sp2g03480 Schrenkiella parvula HOM05D003743 ORTHO05D004311 1.8e-21 107.5 135 40.0
TWI23G0181 Tripterygium wilfordii HOM05D003743 ORTHO05D004311 1.8e-21 107.5 135 40.7
arahy.Tifrunner.gnm1.ann1.I4CLDN Arachis hypogaea HOM05D003743 ORTHO05D004311 2.4e-21 107.1 387 25.1
Nn1g07800 Nelumbo nucifera HOM05D003743 ORTHO05D004311 2.4e-21 107.1 393 24.9
BcaB04g20309 Brassica carinata HOM05D003743 ORTHO05D004311 3.1e-21 106.7 135 39.3
BcaC09g49339 Brassica carinata HOM05D003743 ORTHO05D004311 3.1e-21 106.7 135 39.3
A01p29850 Brassica napus HOM05D003743 ORTHO05D004311 3.1e-21 106.7 135 39.3
C01p37700 Brassica napus HOM05D003743 ORTHO05D004311 3.1e-21 106.7 135 39.3
BolC1t03734H Brassica oleracea HOM05D003743 ORTHO05D004311 3.1e-21 106.7 135 39.3
BraA01t03113Z Brassica rapa HOM05D003743 ORTHO05D004311 3.1e-21 106.7 135 39.3
Cpa.g.sc27.76 Carica papaya HOM05D003743 ORTHO05D004311 3.1e-21 106.7 135 40.0
FvH4_6g07870 Fragaria vesca HOM05D003743 ORTHO05D004311 3.1e-21 106.7 391 25.3
Psat7g112160 Pisum sativum HOM05D003743 ORTHO05D004311 3.1e-21 106.7 128 42.2
TPR.G30857 Trifolium pratense HOM05D003743 ORTHO05D004311 3.1e-21 106.7 384 25.5
AT1G61040 Arabidopsis thaliana HOM05D003743 ORTHO05D004311 4.1e-21 106.3 133 40.6
Thhalv10023338m.g Eutrema salsugineum HOM05D003743 ORTHO05D004311 4.1e-21 106.3 135 39.3
FAN02G2028 Fragaria x ananassa HOM05D003743 ORTHO05D004311 4.1e-21 106.3 393 25.4
Lj4g0023106 Lotus japonicus HOM05D003743 ORTHO05D004311 4.1e-21 106.3 132 41.7
TAR629G2996 Trochodendron aralioides HOM05D003743 ORTHO05D004311 4.1e-21 106.3 132 43.2
CARHR052180 Cardamine hirsuta HOM05D003743 ORTHO05D004311 5.4e-21 105.9 133 39.8
BcaC06g31829 Brassica carinata HOM05D003743 ORTHO05D004311 7.0e-21 105.5 135 39.3
Medtr4g089070 Medicago truncatula HOM05D003743 ORTHO05D004311 7.0e-21 105.5 134 39.6
Potri.011G047900 Populus trichocarpa HOM05D003743 ORTHO05D004311 7.0e-21 105.5 132 40.9
BcaC02g10594 Brassica carinata HOM05D003743 ORTHO05D004311 1.2e-20 104.8 135 39.3
C04p25600 Brassica napus HOM05D003743 ORTHO05D004311 1.2e-20 104.8 135 39.3
DCAR_004099 Daucus carota HOM05D003743 ORTHO05D004311 1.2e-20 104.8 133 41.4
Psat3g052160 Pisum sativum HOM05D003743 ORTHO05D004311 1.6e-20 104.4 383 24.8
Ca_08759_v3 Cicer arietinum L. HOM05D003743 ORTHO05D004311 2.0e-20 104.0 135 39.3
Ca_30219_v3 Cicer arietinum L. HOM05D003743 ORTHO05D004311 2.0e-20 104.0 135 39.3
HPP92_024423 Vanilla planifolia HOM05D003743 ORTHO05D004311 4.5e-20 102.8 391 24.3
AUR62020979 Chenopodium quinoa HOM05D003743 ORTHO05D004311 5.9e-20 102.4 141 39.0
AUR62043193 Chenopodium quinoa HOM05D003743 ORTHO05D004311 5.9e-20 102.4 141 39.0
VMungo1383G3375 Vigna mungo HOM05D003743 ORTHO05D004311 5.9e-20 102.4 134 40.3
Potri.004G039500 Populus trichocarpa HOM05D003743 ORTHO05D004311 7.7e-20 102.1 134 40.3
Ah.09g235750 Amaranthus hybridus HOM05D003743 ORTHO05D004311 1.0e-19 101.7 379 26.9
Glyma.13G060000 Glycine max HOM05D003743 ORTHO05D004311 1.3e-19 101.3 128 41.4
Lj1P877T22 Lonicera japonica HOM05D003743 ORTHO05D004311 1.3e-19 101.3 199 33.7
Lalb_Chr16g0383591 Lupinus albus HOM05D003743 ORTHO05D004311 1.3e-19 101.3 134 38.8
Glyma.03G168800 Glycine max HOM05D003743 ORTHO05D004311 1.7e-19 100.9 131 42.0
Zm00001eb137720 Zea mays HOM05D003743 ORTHO05D004311 1.7e-19 100.9 132 39.4
Zm00001eb410600 Zea mays HOM05D003743 ORTHO05D004311 1.7e-19 100.9 133 39.1
Sc06g0009130 Simmondsia chinensis HOM05D003743 ORTHO05D004311 2.3e-19 100.5 140 38.6
Ah.04g152550 Amaranthus hybridus HOM05D003743 ORTHO05D004311 2.9e-19 100.1 200 33.5
ECA248G2279 Erigeron canadensis HOM05D003743 ORTHO05D004311 2.9e-19 100.1 132 40.2
Sabra11G0033300 Salix brachista HOM05D003743 ORTHO05D004311 3.8e-19 99.8 128 39.8
Sed0012938 Sechium edule HOM05D003743 ORTHO05D004311 3.8e-19 99.8 471 24.2
Phvul.001G167200 Phaseolus vulgaris HOM05D003743 ORTHO05D004311 5.0e-19 99.4 135 39.3
PSO210G5871 Papaver somniferum HOM05D003743 ORTHO05D004311 6.5e-19 99.0 132 40.9
QL03p016879 Quercus lobata HOM05D003743 ORTHO05D004311 6.5e-19 99.0 130 41.5
Sabra04G0024300 Salix brachista HOM05D003743 ORTHO05D004311 6.5e-19 99.0 132 39.4
MD04G1191400 Malus domestica HOM05D003743 ORTHO05D004311 8.6e-19 98.6 132 42.4
PSO170G2796 Papaver somniferum HOM05D003743 ORTHO05D004311 1.9e-18 97.4 132 40.2
EL10Ac8g18529 Beta vulgaris HOM05D003743 ORTHO05D004311 2.5e-18 97.1 149 36.9
Os12g0535900 Oryza sativa ssp. japonica HOM05D003743 ORTHO05D004311 3.2e-18 96.7 132 37.9
EL10Ac8g20336 Beta vulgaris HOM05D003743 ORTHO05D004311 2.1e-17 94.0 92 50.0
SEGI_13209 Sequoiadendron giganteum HOM05D003743 ORTHO05D004311 2.1e-17 94.0 183 32.8
Glyma.19G170200 Glycine max HOM05D003743 ORTHO05D004311 2.8e-17 93.6 135 37.0
Phvul.001G224300 Phaseolus vulgaris HOM05D003743 ORTHO05D004311 2.8e-17 93.6 134 40.3
AUR62014784 Chenopodium quinoa HOM05D003743 ORTHO05D004311 3.6e-17 93.2 92 46.7
Mapoly0009s0176 Marchantia polymorpha HOM05D003743 ORTHO05D004311 4.7e-17 92.8 134 38.8
AagrBONN_evm.TU.Sc2ySwM_368.1522 Anthoceros agrestis HOM05D003743 ORTHO05D004311 8.0e-17 92.0 135 33.3
CANSAT54G1490 Cannabis sativa HOM05D003743 ORTHO05D004311 8.0e-17 92.0 134 38.1
Ca_20186_v3 Cicer arietinum L. HOM05D003743 ORTHO05D004311 1.0e-16 91.7 132 37.1
SMO118G0429 Selaginella moellendorffii HOM05D003743 ORTHO05D004311 1.0e-16 91.7 114 39.5
Aqoxy1G03805 Aquilegia oxysepala HOM05D003743 ORTHO05D004311 1.4e-16 91.3 378 24.3
Glyma.03G230500 Glycine max HOM05D003743 ORTHO05D004311 1.4e-16 91.3 134 38.1
Mapoly0001s0024 Marchantia polymorpha HOM05D003743 ORTHO05D004311 4.4e-15 86.3 134 36.6
Psat7g225840 Pisum sativum HOM05D003743 ORTHO05D004311 4.4e-15 86.3 135 34.8
Medtr4g032885 Medicago truncatula HOM05D003743 ORTHO05D004311 7.5e-15 85.5 132 35.6
TPR.G34103 Trifolium pratense HOM05D003743 ORTHO05D004311 9.8e-15 85.1 133 35.3
Lj1g0026238 Lotus japonicus HOM05D003743 ORTHO05D004311 1.3e-14 84.7 349 23.5
Pp3c12_17420 Physcomitrium patens HOM05D003743 ORTHO05D004311 6.3e-14 82.4 92 41.3
Aqoxy3G03252 Aquilegia oxysepala HOM05D003743 ORTHO05D004311 4.5e-12 76.3 133 36.1
MBI16_g34928_MAGBIO Magnolia biondii HOM05D003743 ORTHO05D004311 7.8e-12 75.5 125 35.2
FAN25G1603 Fragaria x ananassa HOM05D003743 ORTHO05D004311 8.6e-11 72.0 131 32.8
Oeu016117.1 Olea europaea HOM05D003743 ORTHO05D004311 1.5e-10 71.2 123 36.6
FvH4_6g03622 Fragaria vesca HOM05D003743 ORTHO05D004311 5.6e-10 69.3 66 50.0
GSVIVG01006453001 Vitis vinifera HOM05D003743 ORTHO05D004311 2.3e-08 63.9 80 42.5
Lalb_Chr04g0260391 Lupinus albus HOM05D003743 ORTHO05D004311 8.9e-08 62.0 123 29.3
Lalb_Chr20g0113451 Lupinus albus HOM05D003743 ORTHO05D004311 2.9e-06 57.0 72 45.8
VMungo1383G2741 Vigna mungo HOM05D003743 ORTHO05D004311 3.7e-06 56.6 64 40.6
A03p68920 Brassica napus HOM05D003743 ORTHO05D004311 4.9e-06 56.2 68 41.2
BraSC39t46172Z Brassica rapa HOM05D003743 ORTHO05D004311 4.9e-06 56.2 68 41.2
ECA246G3327 Erigeron canadensis HOM05D001482 ORTHO05D001499 8.3e-06 55.5 49 49.0


User provided reference genes

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