Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold485G52365 Striga asiatica HOM05D005445 ORTHO05D007043 1.7e-182 642.5 321 100.0
MSTRG.26517 Avicennia marina HOM05D005445 ORTHO05D007043 2.2e-137 492.7 323 79.3
Hma1.2p1_0314F.1_g122070 Hydrangea macrophylla HOM05D005445 ORTHO05D007043 2.7e-135 485.7 321 75.4
SalBow5G4362 Salvia bowleyana HOM05D005445 ORTHO05D007043 2.8e-132 475.7 332 76.8
Solyc07g017400.3 Solanum lycopersicum HOM05D005445 ORTHO05D007043 6.9e-131 471.1 322 73.9
Cc00_g00070 Coffea canephora HOM05D005445 ORTHO05D007043 1.2e-130 470.3 322 73.6
Sopen07g006100 Solanum pennellii HOM05D005445 ORTHO05D007043 2.9e-129 465.7 322 73.3
CSS0000968 Camellia sinensis var. sinensis HOM05D005445 ORTHO05D007043 8.4e-129 464.2 323 72.4
CAN.G146.2 Capsicum annuum HOM05D005445 ORTHO05D007043 5.4e-128 461.5 322 72.0
Nitab4.5_0000899g0030 Nicotiana tabacum HOM05D005445 ORTHO05D007043 7.9e-127 457.6 311 73.3
Oeu028820.1 Olea europaea HOM05D005445 ORTHO05D007043 1.3e-126 456.8 299 77.6
Actinidia07565 Actinidia chinensis HOM05D005445 ORTHO05D007043 6.7e-126 454.5 322 71.1
Nitab4.5_0004036g0030 Nicotiana tabacum HOM05D005445 ORTHO05D007043 1.5e-125 453.4 307 73.6
Rhsim04G0099700 Rhododendron simsii HOM05D005445 ORTHO05D007043 5.6e-125 451.4 320 70.6
CiPaw.15G161100 Carya illinoinensis HOM05D005445 ORTHO05D007043 7.4e-125 451.1 323 70.0
Nn8g41135 Nelumbo nucifera HOM05D005445 ORTHO05D007043 1.1e-123 447.2 326 69.0
Dinv12613 Davidia involucrata HOM05D005445 ORTHO05D007043 2.4e-123 446.0 322 69.6
GSVIVG01032266001 Vitis vinifera HOM05D005445 ORTHO05D007043 2.4e-123 446.0 324 70.1
Thecc.09G196900 Theobroma cacao HOM05D005445 ORTHO05D007043 6.9e-123 444.5 323 70.3
Migut.L01918 Erythranthe guttata HOM05D005445 ORTHO05D007043 2.6e-122 442.6 300 76.3
Glyma.08G027200 Glycine max HOM05D005445 ORTHO05D007043 1.7e-121 439.9 322 68.3
Ciclev10008923m.g Citrus clementina HOM05D005445 ORTHO05D007043 3.2e-120 435.6 323 69.3
Prupe.1G063800 Prunus persica HOM05D005445 ORTHO05D007043 3.2e-120 435.6 323 67.8
Gohir.A08G017100 Gossypium hirsutum HOM05D005445 ORTHO05D007043 1.6e-119 433.3 323 70.3
DCAR_020460 Daucus carota HOM05D005445 ORTHO05D007043 2.1e-119 433.0 306 70.9
Cpa.g.sc115.19 Carica papaya HOM05D005445 ORTHO05D007043 2.7e-119 432.6 317 68.1
Medtr8g101230 Medicago truncatula HOM05D005445 ORTHO05D007043 1.8e-118 429.9 323 68.4
FvH4_4g06040 Fragaria vesca HOM05D005445 ORTHO05D007043 3.0e-118 429.1 322 67.4
Glyma.05G220700 Glycine max HOM05D005445 ORTHO05D007043 3.0e-118 429.1 322 67.7
TAR383G0382 Trochodendron aralioides HOM05D005445 ORTHO05D007043 5.1e-118 428.3 328 67.1
RcHm_v2.0_Chr4g0397601 Rosa chinensis HOM05D005445 ORTHO05D007043 6.7e-118 427.9 323 67.8
TWI63G1185 Tripterygium wilfordii HOM05D005445 ORTHO05D007043 8.7e-118 427.6 322 67.7
MD16G1238000 Malus domestica HOM05D005445 ORTHO05D007043 1.9e-117 426.4 323 67.2
Gohir.D08G027500 Gossypium hirsutum HOM05D005445 ORTHO05D007043 2.5e-117 426.0 323 69.7
Ca_17431_v3 Cicer arietinum L. HOM05D005445 ORTHO05D007043 9.6e-117 424.1 323 66.3
Ca_17440_v3 Cicer arietinum L. HOM05D005445 ORTHO05D007043 9.6e-117 424.1 323 66.3
TPR.G25470 Trifolium pratense HOM05D005445 ORTHO05D007043 2.1e-116 422.9 321 67.0
FAN17G2613 Fragaria x ananassa HOM05D005445 ORTHO05D007043 3.7e-116 422.2 322 66.5
TAR383G1024 Trochodendron aralioides HOM05D005445 ORTHO05D007043 3.7e-116 422.2 317 68.1
Gorai.004G024500 Gossypium raimondii HOM05D005445 ORTHO05D007043 4.8e-116 421.8 328 68.6
ECA234G2663 Erigeron canadensis HOM05D005445 ORTHO05D007043 6.2e-116 421.4 315 67.9
arahy.Tifrunner.gnm1.ann1.HNJF4G Arachis hypogaea HOM05D005445 ORTHO05D007043 8.2e-116 421.0 322 66.5
MBI13_g31572_MAGBIO Magnolia biondii HOM05D005445 ORTHO05D007043 8.2e-116 421.0 317 67.8
Lj4g0004845 Lotus japonicus HOM05D005445 ORTHO05D007043 1.8e-115 419.9 320 66.9
Aqoxy7G02630 Aquilegia oxysepala HOM05D005445 ORTHO05D007043 4.0e-115 418.7 321 67.3
QL11p008649 Quercus lobata HOM05D005445 ORTHO05D007043 4.0e-115 418.7 362 61.3
Manes.02G221800 Manihot esculenta HOM05D005445 ORTHO05D007043 6.9e-115 417.9 308 69.5
VMungo0251G0086 Vigna mungo HOM05D005445 ORTHO05D007043 6.9e-115 417.9 322 65.8
Lalb_Chr09g0332001 Lupinus albus HOM05D005445 ORTHO05D007043 1.0e-113 414.1 321 65.4
Psat7g020920 Pisum sativum HOM05D005445 ORTHO05D007043 1.0e-113 414.1 323 64.7
Hund03231 Selenicereus undatus HOM05D005445 ORTHO05D007043 1.0e-113 414.1 325 65.8
Atru.chr7.1013 Acer truncatum HOM05D005445 ORTHO05D007043 1.3e-113 413.7 322 67.1
CANSAT80G1260 Cannabis sativa HOM05D005445 ORTHO05D007043 4.9e-113 411.8 324 65.4
Cfa020755 Carpinus fangiana HOM05D005445 ORTHO05D007043 4.2e-112 408.7 308 68.8
CDE06G0990 Ceratophyllum demersum HOM05D005445 ORTHO05D007043 1.6e-111 406.8 322 63.4
Lsat_1_v5_gn_5_80620 Lactuca sativa HOM05D005445 ORTHO05D007043 3.5e-111 405.6 297 70.4
THA.LOC104815270 Tarenaya hassleriana HOM05D005445 ORTHO05D007043 3.5e-111 405.6 315 64.1
HPP92_028347 Vanilla planifolia HOM05D005445 ORTHO05D007043 3.5e-111 405.6 325 64.0
CiPaw.16G104300 Carya illinoinensis HOM05D005445 ORTHO05D007043 1.0e-110 404.1 324 65.1
Phvul.002G302400 Phaseolus vulgaris HOM05D005445 ORTHO05D007043 2.3e-110 402.9 322 65.2
Duzib168G0912 Durio zibethinus HOM05D005445 ORTHO05D007043 3.0e-110 402.5 336 64.0
Sabra06G0059700 Salix brachista HOM05D005445 ORTHO05D007043 8.7e-110 401.0 325 64.6
FAN07G1413 Fragaria x ananassa HOM05D005445 ORTHO05D007043 3.3e-109 399.1 322 64.6
arahy.Tifrunner.gnm1.ann1.K4ERET Arachis hypogaea HOM05D005445 ORTHO05D007043 1.1e-107 394.0 362 58.8
HanXRQChr10g0309531 Helianthus annuus HOM05D005445 ORTHO05D007043 1.4e-107 393.7 298 66.8
unitig_85.g27245 Utricularia gibba HOM05D005445 ORTHO05D007043 6.9e-107 391.3 301 68.1
ATR0626G233 Amborella trichopoda HOM05D005445 ORTHO05D007043 5.9e-106 388.3 328 60.4
CsaV3_2G009110 Cucumis sativus L. HOM05D005445 ORTHO05D007043 7.7e-106 387.9 320 64.1
MELO3C003927.2 Cucumis melo HOM05D005445 ORTHO05D007043 2.2e-105 386.3 319 63.9
Potri.006G078800 Populus trichocarpa HOM05D005445 ORTHO05D007043 5.0e-105 385.2 322 62.7
AT2G26590 Arabidopsis thaliana HOM05D005445 ORTHO05D007043 1.1e-104 384.0 292 65.1
PGR142G0598 Punica granatum HOM05D005445 ORTHO05D007043 1.1e-104 384.0 308 65.3
ClCG11G011350 Citrullus lanatus HOM05D005445 ORTHO05D007043 1.6e-103 380.2 320 63.4
Os05g0594800 Oryza sativa ssp. japonica HOM05D005445 ORTHO05D007043 3.6e-103 379.0 309 63.8
Sp4g09300 Schrenkiella parvula HOM05D005445 ORTHO05D007043 3.6e-103 379.0 293 64.8
CARHR118490 Cardamine hirsuta HOM05D005445 ORTHO05D007043 3.9e-102 375.6 290 64.5
Duzib170G0675 Durio zibethinus HOM05D005445 ORTHO05D007043 6.7e-102 374.8 321 59.8
BcaC01g04909 Brassica carinata HOM05D005445 ORTHO05D007043 2.0e-101 373.2 292 64.4
Eucgr.C00062 Eucalyptus grandis HOM05D005445 ORTHO05D007043 5.7e-101 371.7 310 61.9
AL4G19530 Arabidopsis lyrata HOM05D005445 ORTHO05D007043 7.4e-101 371.3 289 63.3
BolC3t15563H Brassica oleracea HOM05D005445 ORTHO05D007043 9.7e-101 370.9 296 63.9
C03p32210 Brassica napus HOM05D005445 ORTHO05D007043 1.7e-100 370.2 292 63.7
Zm00001eb297230 Zea mays HOM05D005445 ORTHO05D007043 1.7e-100 370.2 321 61.1
BcaB01g03027 Brassica carinata HOM05D005445 ORTHO05D007043 2.2e-100 369.8 292 64.4
Carub.0004s0844 Capsella rubella HOM05D005445 ORTHO05D007043 2.2e-100 369.8 291 65.3
Thhalv10000977m.g Eutrema salsugineum HOM05D005445 ORTHO05D007043 2.8e-100 369.4 313 63.6
Lj5C772G2 Lonicera japonica HOM05D005445 ORTHO05D007043 3.7e-100 369.0 268 69.0
BraA03t11899Z Brassica rapa HOM05D005445 ORTHO05D007043 6.3e-100 368.2 296 62.8
Sed0003073 Sechium edule HOM05D005445 ORTHO05D007043 6.3e-100 368.2 285 66.7
Aa31LG5G9140 Aethionema arabicum HOM05D005445 ORTHO05D007043 2.6e-98 362.8 294 61.2
PSO063G4940 Papaver somniferum HOM05D005445 ORTHO05D007043 2.6e-98 362.8 330 58.5
PSO170G6081 Papaver somniferum HOM05D005445 ORTHO05D007043 1.7e-97 360.1 330 58.5
vmacro20760 Vaccinium macrocarpon HOM05D005445 ORTHO05D007043 2.9e-97 359.4 371 52.8
Peaxi162Scf01184g00140 Petunia axillaris HOM05D005445 ORTHO05D007043 3.8e-97 359.0 339 57.5
Ah.10g032730 Amaranthus hybridus HOM05D005445 ORTHO05D007043 6.5e-97 358.2 301 62.5
Thhalv10016855m.g Eutrema salsugineum HOM05D005445 ORTHO05D007043 6.5e-97 358.2 279 65.6
A03p26880 Brassica napus HOM05D005445 ORTHO05D007043 2.1e-95 353.2 296 61.1
AUR62027984 Chenopodium quinoa HOM05D005445 ORTHO05D007043 1.5e-93 347.1 358 57.5
EL10Ac2g03624 Beta vulgaris HOM05D005445 ORTHO05D007043 2.6e-93 346.3 342 57.3
SEGI_14233 Sequoiadendron giganteum HOM05D005445 ORTHO05D007043 1.1e-91 340.9 343 54.2
AUR62020729 Chenopodium quinoa HOM05D005445 ORTHO05D007043 1.7e-89 333.6 326 57.7
Hma1.2p1_0314F.1_g122080 Hydrangea macrophylla HOM05D005445 ORTHO05D007043 9.4e-88 327.8 219 76.3
Dinv26479 Davidia involucrata HOM05D005445 ORTHO05D007043 3.5e-82 309.3 222 71.6
Lalb_Chr05g0223811 Lupinus albus HOM05D005445 ORTHO05D007043 3.0e-78 296.2 244 62.7
Pp3c21_370 Physcomitrium patens HOM05D005445 ORTHO05D007043 7.5e-77 291.6 329 49.8
Dinv00323 Davidia involucrata HOM05D005445 ORTHO05D007043 7.2e-72 275.0 195 73.8
Sc14g0007060 Simmondsia chinensis HOM05D005445 ORTHO05D007043 6.1e-71 271.9 225 64.9
Mapoly0011s0124 Marchantia polymorpha HOM05D005445 ORTHO05D007043 4.1e-67 259.2 325 48.6
SMO116G0379 Selaginella moellendorffii HOM05D005445 ORTHO05D007043 4.5e-66 255.8 284 50.4
CDE02G2220 Ceratophyllum demersum HOM05D005445 ORTHO05D007043 1.5e-61 240.7 226 57.5
CBR_g28055 Chara braunii HOM05D005445 ORTHO05D007043 2.2e-60 236.9 339 42.5
COL.COLO4_23410 Corchorus olitorius HOM05D005445 ORTHO05D007043 5.6e-56 222.2 152 71.1
Haze_19097 Corylus avellana HOM05D005445 ORTHO05D007043 1.8e-46 190.7 203 55.7
Sc14g0006300 Simmondsia chinensis HOM05D005445 ORTHO05D007043 2.7e-34 150.2 124 60.5
vmacro10242 Vaccinium macrocarpon HOM05D002150 ORTHO05D002191 5.2e-30 136.0 95 69.5
vmacro07726 Vaccinium macrocarpon HOM05D005445 ORTHO05D007043 2.6e-29 133.7 94 69.1
HPP92_015797 Vanilla planifolia HOM05D005445 ORTHO05D007043 1.7e-28 131.0 294 33.3
C03p32230 Brassica napus HOM05D005445 ORTHO05D007043 1.2e-26 124.8 81 72.8
BolC3t15564H Brassica oleracea HOM05D005445 ORTHO05D007043 1.2e-26 124.8 81 72.8
Cre11.g469450 Chlamydomonas reinhardtii HOM05D005445 ORTHO05D007043 3.0e-25 120.2 350 28.6
MD13G1232400 Malus domestica HOM05D005445 ORTHO05D007043 8.7e-25 118.6 175 46.3
MCO02G027 Micromonas commoda HOM05D005445 ORTHO05D007043 3.3e-24 116.7 344 28.2
Lalb_Chr05g0223801 Lupinus albus HOM05D005445 ORTHO05D007043 5.4e-19 99.4 68 69.1
HanXRQChr09g0248391 Helianthus annuus HOM05D005445 ORTHO05D007043 1.6e-18 97.8 81 65.4
HanXRQChr09g0242981 Helianthus annuus HOM05D005445 ORTHO05D007043 3.5e-18 96.7 81 64.2
HanXRQChr13g0395691 Helianthus annuus HOM05D005445 ORTHO05D007043 3.5e-18 96.7 81 64.2
HanXRQChr09g0246171 Helianthus annuus HOM05D005445 ORTHO05D007043 1.7e-17 94.4 78 65.4
SGA_v2.0_scaffold21G09605 Striga asiatica HOM05D005445 ORTHO05D007043 1.7e-17 94.4 217 36.4
HanXRQChr09g0242991 Helianthus annuus HOM05D005445 ORTHO05D007043 4.3e-16 89.7 86 57.0
vmacro04822 Vaccinium macrocarpon HOM05D005445 ORTHO05D007043 1.7e-12 77.8 47 74.5
SHI03135 Sapria himalayana HOM05D005445 ORTHO05D007043 3.8e-12 76.6 52 63.5
Potri.003G027722 Populus trichocarpa HOM05D005445 ORTHO05D007043 5.6e-08 62.8 64 48.4
Potri.003G027520 Populus trichocarpa HOM05D005445 ORTHO05D007043 9.0e-06 55.5 44 68.2


User provided reference genes

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