Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold478G52224 Striga asiatica HOM05D001534 ORTHO05D004495 7.6e-71 270.4 137 100.0
Aa31LG3G11260 Aethionema arabicum HOM05D001534 ORTHO05D004495 2.2e-14 82.8 96 47.9
vmacro09683 Vaccinium macrocarpon HOM05D001534 ORTHO05D004495 4.2e-13 78.6 132 43.9
SGA_v2.0_scaffold168G38510 Striga asiatica HOM05D001534 ORTHO05D004495 2.1e-12 76.3 39 92.3
MSTRG.13004 Avicennia marina HOM05D001534 ORTHO05D004495 1.5e-10 70.1 38 86.8
PGR083G1538 Punica granatum HOM05D001534 ORTHO05D004495 3.4e-10 68.9 34 94.1
MD03G1192100 Malus domestica HOM05D001534 ORTHO05D004495 4.4e-10 68.6 34 91.2
SalBow8G1454 Salvia bowleyana HOM05D001534 ORTHO05D004495 4.4e-10 68.6 46 78.3
CSS0049003 Camellia sinensis var. sinensis HOM05D001534 ORTHO05D004495 9.8e-10 67.4 34 94.1
CSS0050069 Camellia sinensis var. sinensis HOM05D001534 ORTHO05D004495 9.8e-10 67.4 34 94.1
Duzib213G1078 Durio zibethinus HOM05D001534 ORTHO05D004495 9.8e-10 67.4 34 91.2
MD11G1208300 Malus domestica HOM05D001534 ORTHO05D004495 9.8e-10 67.4 34 91.2
Manes.03G135400 Manihot esculenta HOM05D001534 ORTHO05D004495 9.8e-10 67.4 34 91.2
Cpa.g.sc12.231 Carica papaya HOM05D001534 ORTHO05D004495 1.3e-09 67.0 33 97.0
Eucgr.F00645 Eucalyptus grandis HOM05D001534 ORTHO05D004495 1.3e-09 67.0 35 85.7
FAN11G0198 Fragaria x ananassa HOM05D001534 ORTHO05D004495 1.3e-09 67.0 67 55.2
Glyma.08G322900 Glycine max HOM05D001534 ORTHO05D004495 1.3e-09 67.0 34 91.2
Nitab4.5_0006248g0040 Nicotiana tabacum HOM05D001534 ORTHO05D004495 1.3e-09 67.0 39 79.5
Phvul.006G049200 Phaseolus vulgaris HOM05D001534 ORTHO05D004495 1.3e-09 67.0 34 88.2
Thecc.07G150700 Theobroma cacao HOM05D001534 ORTHO05D004495 1.7e-09 66.6 34 88.2
TWI38G0624 Tripterygium wilfordii HOM05D001534 ORTHO05D004495 1.7e-09 66.6 33 93.9
CiPaw.11G195700 Carya illinoinensis HOM05D001534 ORTHO05D004495 2.2e-09 66.2 34 88.2
Prupe.4G225100 Prunus persica HOM05D001534 ORTHO05D004495 2.2e-09 66.2 34 88.2
COL.COLO4_09746 Corchorus olitorius HOM05D001534 ORTHO05D003503 2.8e-09 65.9 34 88.2
DCAR_022596 Daucus carota HOM05D001534 ORTHO05D004495 2.8e-09 65.9 34 91.2
THA.LOC104817690 Tarenaya hassleriana HOM05D001534 ORTHO05D004495 2.8e-09 65.9 33 97.0
Duzib268G1739 Durio zibethinus HOM05D001534 ORTHO05D004495 3.7e-09 65.5 34 88.2
Glyma.18G089300 Glycine max HOM05D001534 ORTHO05D004495 3.7e-09 65.5 34 88.2
Lalb_Chr18g0050341 Lupinus albus HOM05D001534 ORTHO05D004495 3.7e-09 65.5 34 88.2
Psat5g174000 Pisum sativum HOM05D001534 ORTHO05D004495 3.7e-09 65.5 34 91.2
Potri.011G092600 Populus trichocarpa HOM05D001534 ORTHO05D004495 3.7e-09 65.5 33 93.9
TWI38G1361 Tripterygium wilfordii HOM05D001534 ORTHO05D004495 3.7e-09 65.5 33 93.9
Duzib170G0444 Durio zibethinus HOM05D001534 ORTHO05D004495 4.8e-09 65.1 33 90.9
Gohir.A08G024400 Gossypium hirsutum HOM05D001534 ORTHO05D004495 4.8e-09 65.1 33 90.9
Gohir.A13G136100 Gossypium hirsutum HOM05D001534 ORTHO05D004495 4.8e-09 65.1 33 90.9
Gohir.D08G034900 Gossypium hirsutum HOM05D001534 ORTHO05D004495 4.8e-09 65.1 33 90.9
Gohir.D13G140400 Gossypium hirsutum HOM05D001534 ORTHO05D004495 4.8e-09 65.1 33 90.9
Gorai.004G032800 Gossypium raimondii HOM05D001534 ORTHO05D004495 4.8e-09 65.1 33 90.9
Gorai.013G157000 Gossypium raimondii HOM05D001534 ORTHO05D004495 4.8e-09 65.1 33 90.9
Oeu007990.1 Olea europaea HOM05D001534 ORTHO05D004495 4.8e-09 65.1 33 93.9
Solyc12g098720.3 Solanum lycopersicum HOM05D001534 ORTHO05D004495 4.8e-09 65.1 37 86.5
arahy.Tifrunner.gnm1.ann1.DAYY2D Arachis hypogaea HOM05D001534 ORTHO05D004495 6.3e-09 64.7 34 88.2
FvH4_3g23660 Fragaria vesca HOM05D001534 ORTHO05D004495 6.3e-09 64.7 34 88.2
FAN16G1322 Fragaria x ananassa HOM05D001534 ORTHO05D004495 6.3e-09 64.7 34 88.2
FAN21G0845 Fragaria x ananassa HOM05D001534 ORTHO05D004495 6.3e-09 64.7 34 88.2
FAN25G0400 Fragaria x ananassa HOM05D001534 ORTHO05D004495 6.3e-09 64.7 34 88.2
Gohir.D05G375100 Gossypium hirsutum HOM05D001534 ORTHO05D004495 6.3e-09 64.7 33 93.9
Lsat_1_v5_gn_9_36141 Lactuca sativa HOM05D001534 ORTHO05D004495 6.3e-09 64.7 34 85.3
Lalb_Chr20g0115821 Lupinus albus HOM05D001534 ORTHO05D004495 6.3e-09 64.7 37 78.4
Oeu019637.1 Olea europaea HOM05D001534 ORTHO05D004495 6.3e-09 64.7 33 93.9
Actinidia00113 Actinidia chinensis HOM05D001534 ORTHO05D004495 1.1e-08 63.9 33 90.9
CiPaw.12G134400 Carya illinoinensis HOM05D001534 ORTHO05D004495 1.1e-08 63.9 34 85.3
Lj6g0025719 Lotus japonicus HOM05D001534 ORTHO05D004495 1.1e-08 63.9 34 85.3
Nitab4.5_0000130g0260 Nicotiana tabacum HOM05D001534 ORTHO05D004495 1.1e-08 63.9 33 90.9
Peaxi162Scf00007g00125 Petunia axillaris HOM05D001534 ORTHO05D004495 1.1e-08 63.9 33 93.9
Sabra16G0237300 Salix brachista HOM05D001534 ORTHO05D004495 1.1e-08 63.9 63 52.4
Sopen12g033480 Solanum pennellii HOM05D001534 ORTHO05D004495 1.1e-08 63.9 33 93.9
TWI39G1192 Tripterygium wilfordii HOM05D001534 ORTHO05D004495 1.1e-08 63.9 33 90.9
Ciclev10010112m.g Citrus clementina HOM05D001534 ORTHO05D004495 1.4e-08 63.5 33 84.8
RcHm_v2.0_Chr5g0041721 Rosa chinensis HOM05D001534 ORTHO05D004495 1.4e-08 63.5 34 85.3
AT5G55290 Arabidopsis thaliana HOM05D001534 ORTHO05D004495 1.8e-08 63.2 33 87.9
Carub.0008s1562 Capsella rubella HOM05D001534 ORTHO05D004495 1.8e-08 63.2 33 87.9
Thhalv10015209m.g Eutrema salsugineum HOM05D001534 ORTHO05D004495 1.8e-08 63.2 33 87.9
Manes.15G065300 Manihot esculenta HOM05D001534 ORTHO05D004495 1.8e-08 63.2 33 84.8
Sp6g17210 Schrenkiella parvula HOM05D001534 ORTHO05D004495 1.8e-08 63.2 33 87.9
TPR.G39481 Trifolium pratense HOM05D001534 ORTHO05D004495 1.8e-08 63.2 34 82.4
arahy.Tifrunner.gnm1.ann1.UV2YJP Arachis hypogaea HOM05D001534 ORTHO05D004495 2.4e-08 62.8 34 85.3
HanXRQChr03g0076901 Helianthus annuus HOM05D001534 ORTHO05D004495 2.4e-08 62.8 34 82.4
Hma1.2p1_0036F.1_g023010 Hydrangea macrophylla HOM05D001534 ORTHO05D004495 2.4e-08 62.8 33 90.9
Gohir.A04G011500 Gossypium hirsutum HOM05D001534 ORTHO05D004495 3.1e-08 62.4 33 90.9
Gorai.009G444000 Gossypium raimondii HOM05D001534 ORTHO05D004495 3.1e-08 62.4 33 90.9
Lsat_1_v5_gn_5_2821 Lactuca sativa HOM05D001534 ORTHO05D004495 3.1e-08 62.4 78 44.9
AL8G30834 Arabidopsis lyrata HOM05D001534 ORTHO05D004495 4.1e-08 62.0 33 84.8
CAN.G290.7 Capsicum annuum HOM05D001534 ORTHO05D004495 4.1e-08 62.0 33 87.9
Cc05_g14430 Coffea canephora HOM05D001534 ORTHO05D004495 4.1e-08 62.0 33 87.9
Nitab4.5_0006519g0060 Nicotiana tabacum HOM05D001534 ORTHO05D004495 4.1e-08 62.0 33 87.9
Potri.001G359600 Populus trichocarpa HOM05D001534 ORTHO05D004495 4.1e-08 62.0 33 84.8
Solyc07g049710.3 Solanum lycopersicum HOM05D001534 ORTHO05D004495 4.1e-08 62.0 33 87.9
Sopen07g025310 Solanum pennellii HOM05D001534 ORTHO05D004495 4.1e-08 62.0 33 87.9
PGSC0003DMG400001082 Solanum tuberosum HOM05D001534 ORTHO05D004495 4.1e-08 62.0 33 87.9
THA.LOC104811636 Tarenaya hassleriana HOM05D001534 ORTHO05D004495 4.1e-08 62.0 33 90.9
TAR627G0748 Trochodendron aralioides HOM05D001534 ORTHO05D004495 4.1e-08 62.0 34 85.3
CARHR268660 Cardamine hirsuta HOM05D001534 ORTHO05D004495 5.4e-08 61.6 33 84.8
Haze_09755 Corylus avellana HOM05D001534 ORTHO05D004495 9.1e-08 60.8 34 82.4
EL10Ac9g20750 Beta vulgaris HOM05D001534 ORTHO05D004495 1.2e-07 60.5 34 85.3
Migut.H01785 Erythranthe guttata HOM05D001534 ORTHO05D004495 1.2e-07 60.5 33 87.9
Glyma.14G017500 Glycine max HOM05D001534 ORTHO05D004495 1.2e-07 60.5 34 82.4
HanXRQChr15g0463351 Helianthus annuus HOM05D001534 ORTHO05D004495 1.2e-07 60.5 34 76.5
Sc03g0008250 Simmondsia chinensis HOM05D001534 ORTHO05D004495 1.2e-07 60.5 34 82.4
HanXRQChr05g0159691 Helianthus annuus HOM05D001534 ORTHO05D004495 1.6e-07 60.1 34 70.6
PSO302G0069 Papaver somniferum HOM05D001534 ORTHO05D004495 2.0e-07 59.7 34 82.4
ECA246G1860 Erigeron canadensis HOM05D001534 ORTHO05D004495 2.7e-07 59.3 34 70.6
PSO210G6816 Papaver somniferum HOM05D001534 ORTHO05D004495 2.7e-07 59.3 34 79.4
Actinidia35374 Actinidia chinensis HOM05D001534 ORTHO05D004495 3.5e-07 58.9 37 78.4
GSVIVG01037739001 Vitis vinifera HOM05D001534 ORTHO05D004495 3.5e-07 58.9 33 78.8
Migut.M01699 Erythranthe guttata HOM05D001534 ORTHO05D004495 4.5e-07 58.5 33 87.9
Nn5g26968 Nelumbo nucifera HOM05D001534 ORTHO05D004495 4.5e-07 58.5 34 79.4
PGR031G2647 Punica granatum HOM05D001534 ORTHO05D004495 4.5e-07 58.5 33 84.8
CSS0048655 Camellia sinensis var. sinensis HOM05D001534 ORTHO05D004495 5.9e-07 58.2 34 85.3
GSVIVG01003343001 Vitis vinifera HOM05D001534 ORTHO05D004495 5.9e-07 58.2 33 81.8
GSVIVG01003348001 Vitis vinifera HOM05D001534 ORTHO05D004495 5.9e-07 58.2 33 81.8
Nitab4.5_0002313g0070 Nicotiana tabacum HOM05D001534 ORTHO05D004495 7.7e-07 57.8 33 84.8
Nitab4.5_0001049g0020 Nicotiana tabacum HOM05D001534 ORTHO05D004495 1.0e-06 57.4 33 81.8
Lsat_1_v5_gn_9_90821 Lactuca sativa HOM05D001534 ORTHO05D004495 1.3e-06 57.0 34 70.6
Glyma.02G295900 Glycine max HOM05D001534 ORTHO05D004495 2.3e-06 56.2 34 76.5
vmacro11580 Vaccinium macrocarpon HOM05D001534 ORTHO05D004495 2.3e-06 56.2 33 78.8
vmacro22992 Vaccinium macrocarpon HOM05D001534 ORTHO05D004495 2.3e-06 56.2 33 78.8
BcaB05g22197 Brassica carinata HOM05D001534 ORTHO05D004495 2.9e-06 55.8 33 81.8
BcaC03g14248 Brassica carinata HOM05D001534 ORTHO05D004495 2.9e-06 55.8 33 81.8
C02p16290 Brassica napus HOM05D001534 ORTHO05D004495 2.9e-06 55.8 33 81.8
BolC2t07730H Brassica oleracea HOM05D001534 ORTHO05D004495 2.9e-06 55.8 33 81.8
ClCG09G011120 Citrullus lanatus HOM05D001534 ORTHO05D004495 3.8e-06 55.5 34 76.5
MELO3C013122.2 Cucumis melo HOM05D001534 ORTHO05D004495 3.8e-06 55.5 34 76.5
Sed0022155 Sechium edule HOM05D001534 ORTHO05D004495 3.8e-06 55.5 34 76.5
CSS0039282 Camellia sinensis var. sinensis HOM05D001534 ORTHO05D004495 5.0e-06 55.1 34 76.5
Eucgr.F03511 Eucalyptus grandis HOM05D001534 ORTHO05D004495 5.0e-06 55.1 33 69.7
Hma1.2p1_3177F.1_g333625 Hydrangea macrophylla HOM05D001534 ORTHO05D004495 5.0e-06 55.1 33 81.8
CANSAT35G0060 Cannabis sativa HOM05D001534 ORTHO05D004495 6.6e-06 54.7 33 78.8
Nn2g12773 Nelumbo nucifera HOM05D001534 ORTHO05D004495 6.6e-06 54.7 34 73.5
A02p09760 Brassica napus HOM05D001534 ORTHO05D004495 8.6e-06 54.3 33 78.8
BraA02t06040Z Brassica rapa HOM05D001534 ORTHO05D004495 8.6e-06 54.3 33 78.8
CAN.G710.54 Capsicum annuum HOM05D001534 ORTHO05D004495 8.6e-06 54.3 33 81.8


User provided reference genes

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