Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold452G51847 Striga asiatica HOM05D001392 ORTHO05D014305 1.5e-75 286.2 149 100.0
MSTRG.26714 Avicennia marina HOM05D001392 ORTHO05D003370 1.1e-62 243.4 148 81.8
SGA_v2.0_scaffold35G14149 Striga asiatica HOM05D001392 ORTHO05D003370 2.0e-61 239.2 148 82.4
Migut.J00558 Erythranthe guttata HOM05D001392 ORTHO05D003370 6.6e-60 234.2 148 79.7
Oeu006734.3 Olea europaea HOM05D001392 ORTHO05D003370 1.4e-54 216.5 148 75.7
unitig_744.g24676 Utricularia gibba HOM05D001392 ORTHO05D003370 7.3e-51 204.1 148 70.3
Migut.L01675 Erythranthe guttata HOM05D001392 ORTHO05D003370 2.9e-47 192.2 119 81.5
Actinidia34544 Actinidia chinensis HOM05D001392 ORTHO05D003370 3.2e-46 188.7 148 62.8
Oeu022370.1 Olea europaea HOM05D001392 ORTHO05D003370 5.4e-46 188.0 148 69.6
DCAR_020225 Daucus carota HOM05D001392 ORTHO05D003370 1.6e-45 186.4 148 60.1
Dinv36391 Davidia involucrata HOM05D001392 ORTHO05D003370 4.6e-45 184.9 148 63.5
Actinidia34075 Actinidia chinensis HOM05D001392 ORTHO05D003370 8.6e-44 180.6 148 59.5
Dinv31233 Davidia involucrata HOM05D001392 ORTHO05D003370 1.5e-43 179.9 148 62.8
GSVIVG01010632001 Vitis vinifera HOM05D001392 ORTHO05D003370 4.3e-43 178.3 148 62.2
ATR0782G056 Amborella trichopoda HOM05D001392 ORTHO05D003370 7.3e-43 177.6 144 59.0
MBI18_g01867_MAGBIO Magnolia biondii HOM05D001392 ORTHO05D003370 2.1e-42 176.0 144 61.1
TAR375G1057 Trochodendron aralioides HOM05D001392 ORTHO05D003370 1.4e-41 173.3 148 58.8
Lj9C302G3 Lonicera japonica HOM05D001392 ORTHO05D003370 5.2e-41 171.4 148 58.8
CSS0006913 Camellia sinensis var. sinensis HOM05D001392 ORTHO05D003370 6.8e-41 171.0 148 57.4
CSS0026523 Camellia sinensis var. sinensis HOM05D001392 ORTHO05D003370 6.8e-41 171.0 148 57.4
CSS0030571 Camellia sinensis var. sinensis HOM05D001392 ORTHO05D003370 6.8e-41 171.0 148 57.4
Sc07g0001630 Simmondsia chinensis HOM05D001392 ORTHO05D003370 3.4e-40 168.7 146 58.9
Cc06_g03770 Coffea canephora HOM05D001392 ORTHO05D003370 9.9e-40 167.2 148 56.8
CiPaw.04G068200 Carya illinoinensis HOM05D001392 ORTHO05D003370 2.4e-38 162.5 148 57.4
Eucgr.F04425 Eucalyptus grandis HOM05D001392 ORTHO05D003370 3.5e-37 158.7 149 54.4
COL.COLO4_25471 Corchorus olitorius HOM05D001392 ORTHO05D003370 1.3e-36 156.8 145 56.6
COL.COLO4_31125 Corchorus olitorius HOM05D001392 ORTHO05D003370 1.3e-36 156.8 145 56.6
Ah.03g134560 Amaranthus hybridus HOM05D001392 ORTHO05D003370 2.3e-36 156.0 148 54.1
Cfa008272 Carpinus fangiana HOM05D001392 ORTHO05D003370 2.3e-36 156.0 148 56.1
HanXRQChr14g0461381 Helianthus annuus HOM05D001392 ORTHO05D003370 2.3e-36 156.0 148 55.4
EL10Ac8g19565 Beta vulgaris HOM05D001392 ORTHO05D003370 5.1e-36 154.8 148 55.4
CDE08G1587 Ceratophyllum demersum HOM05D001392 ORTHO05D003370 5.1e-36 154.8 146 51.4
QL09p015520 Quercus lobata HOM05D001392 ORTHO05D003370 5.1e-36 154.8 148 54.7
Lsat_1_v5_gn_5_61861 Lactuca sativa HOM05D001392 ORTHO05D003370 6.6e-36 154.5 148 52.0
vmacro06729 Vaccinium macrocarpon HOM05D001392 ORTHO05D014305 1.1e-35 153.7 168 51.2
Gohir.A08G018000 Gossypium hirsutum HOM05D001392 ORTHO05D003370 5.6e-35 151.4 145 54.5
Hund20713 Selenicereus undatus HOM05D001392 ORTHO05D003370 5.6e-35 151.4 136 58.1
Lsat_1_v5_gn_7_60741 Lactuca sativa HOM05D001392 ORTHO05D003370 7.3e-35 151.0 148 51.4
HanXRQChr03g0071441 Helianthus annuus HOM05D001392 ORTHO05D003370 1.2e-34 150.2 144 53.5
Gohir.D08G028600 Gossypium hirsutum HOM05D001392 ORTHO05D003370 2.1e-34 149.4 145 53.8
Gorai.004G025700 Gossypium raimondii HOM05D001392 ORTHO05D003370 2.1e-34 149.4 145 53.8
Duzib170G0790 Durio zibethinus HOM05D001392 ORTHO05D003370 3.6e-34 148.7 145 52.4
Lsat_1_v5_gn_7_60720 Lactuca sativa HOM05D001392 ORTHO05D003370 3.6e-34 148.7 148 50.0
Thecc.09G180600 Theobroma cacao HOM05D001392 ORTHO05D003370 8.1e-34 147.5 145 53.1
CANSAT56G1922 Cannabis sativa HOM05D001392 ORTHO05D003370 1.4e-33 146.7 148 53.4
Migut.J00692 Erythranthe guttata HOM05D001392 ORTHO05D003370 1.8e-33 146.4 122 63.9
Eucgr.E01106 Eucalyptus grandis HOM05D001392 ORTHO05D003370 5.2e-33 144.8 148 50.7
Cpa.g.sc2.74 Carica papaya HOM05D001392 ORTHO05D003370 6.8e-33 144.4 145 51.0
Potri.007G004100 Populus trichocarpa HOM05D001392 ORTHO05D003370 1.2e-32 143.7 143 51.0
THA.LOC104824111 Tarenaya hassleriana HOM05D001392 ORTHO05D003370 1.2e-32 143.7 145 52.4
Peaxi162Scf00254g00012 Petunia axillaris HOM05D001392 ORTHO05D003370 1.5e-32 143.3 149 49.0
THA.LOC104805109 Tarenaya hassleriana HOM05D001392 ORTHO05D003370 2.0e-32 142.9 145 51.0
Manes.09G005800 Manihot esculenta HOM05D001392 ORTHO05D003370 2.6e-32 142.5 145 50.3
Hund20715 Selenicereus undatus HOM05D001392 ORTHO05D003370 2.6e-32 142.5 120 60.8
Solyc09g007540.3 Solanum lycopersicum HOM05D001392 ORTHO05D003370 5.8e-32 141.4 145 51.0
Sopen09g002410 Solanum pennellii HOM05D001392 ORTHO05D003370 5.8e-32 141.4 145 51.0
Nitab4.5_0000669g0060 Nicotiana tabacum HOM05D001392 ORTHO05D003370 1.7e-31 139.8 145 51.7
PSO782G2668 Papaver somniferum HOM05D001392 ORTHO05D003370 1.7e-31 139.8 144 50.0
TWI81G0741 Tripterygium wilfordii HOM05D001392 ORTHO05D003370 1.7e-31 139.8 149 49.7
PSO478G1977 Papaver somniferum HOM05D001392 ORTHO05D003370 2.2e-31 139.4 144 50.0
PGR031G3606 Punica granatum HOM05D001392 ORTHO05D003370 2.2e-31 139.4 145 50.3
ECA240G2105 Erigeron canadensis HOM05D001392 ORTHO05D003370 2.9e-31 139.0 148 50.7
MD01G1196000 Malus domestica HOM05D001392 ORTHO05D003370 3.8e-31 138.7 146 52.7
CAN.G1091.5 Capsicum annuum HOM05D001392 ORTHO05D003370 6.4e-31 137.9 145 51.7
AUR62014114 Chenopodium quinoa HOM05D001392 ORTHO05D003370 8.4e-31 137.5 144 51.4
Prupe.2G289400 Prunus persica HOM05D001392 ORTHO05D003370 8.4e-31 137.5 146 52.1
EL10Ac5g11700 Beta vulgaris HOM05D001392 ORTHO05D003370 1.4e-30 136.7 186 45.7
AUR62002803 Chenopodium quinoa HOM05D001392 ORTHO05D003370 1.4e-30 136.7 144 49.3
Aa31LG1G460 Aethionema arabicum HOM05D001392 ORTHO05D003370 1.9e-30 136.3 144 50.0
TWI15G0272 Tripterygium wilfordii HOM05D001392 ORTHO05D003370 1.9e-30 136.3 149 48.3
BcaB02g06531 Brassica carinata HOM05D001392 ORTHO05D003370 2.4e-30 136.0 145 50.3
Peaxi162Scf00182g00085 Petunia axillaris HOM05D001392 ORTHO05D003370 2.4e-30 136.0 148 48.6
Aqoxy7G00465 Aquilegia oxysepala HOM05D001392 ORTHO05D003370 4.1e-30 135.2 147 48.3
BraA08t35113Z Brassica rapa HOM05D001392 ORTHO05D003370 4.1e-30 135.2 145 50.3
MD07G1262800 Malus domestica HOM05D001392 ORTHO05D003370 5.4e-30 134.8 146 52.7
A06p10670 Brassica napus HOM05D001392 ORTHO05D003370 7.1e-30 134.4 145 49.7
BraA06t24247Z Brassica rapa HOM05D001392 ORTHO05D003370 7.1e-30 134.4 145 49.7
FvH4_7g28940 Fragaria vesca HOM05D001392 ORTHO05D003370 7.1e-30 134.4 146 50.7
FAN03G1076 Fragaria x ananassa HOM05D001392 ORTHO05D003370 7.1e-30 134.4 146 50.7
FAN03G1857 Fragaria x ananassa HOM05D001392 ORTHO05D003370 7.1e-30 134.4 146 50.7
FAN06G3456 Fragaria x ananassa HOM05D001392 ORTHO05D003370 7.1e-30 134.4 146 50.7
FAN10G1869 Fragaria x ananassa HOM05D001392 ORTHO05D003370 7.1e-30 134.4 146 50.7
BolC3t19544H Brassica oleracea HOM05D001392 ORTHO05D003370 9.2e-30 134.0 146 50.0
FAN06G3412 Fragaria x ananassa HOM05D001392 ORTHO05D003370 9.2e-30 134.0 146 50.7
Aqoxy2G03097 Aquilegia oxysepala HOM05D001392 ORTHO05D003370 1.2e-29 133.7 147 47.6
C08p16790 Brassica napus HOM05D001392 ORTHO05D003370 1.2e-29 133.7 145 50.3
BolC8t49300H Brassica oleracea HOM05D001392 ORTHO05D003370 1.2e-29 133.7 145 50.3
AUR62014110 Chenopodium quinoa HOM05D001392 ORTHO05D003370 1.2e-29 133.7 144 48.6
BcaC05g25377 Brassica carinata HOM05D001392 ORTHO05D003370 1.6e-29 133.3 145 49.0
BcaC07g41556 Brassica carinata HOM05D001392 ORTHO05D003370 1.6e-29 133.3 145 50.3
C08p45570 Brassica napus HOM05D001392 ORTHO05D003370 1.6e-29 133.3 145 50.3
A09p61990 Brassica napus HOM05D001392 ORTHO05D003370 2.1e-29 132.9 145 50.3
C05p12580 Brassica napus HOM05D001392 ORTHO05D003370 2.1e-29 132.9 145 49.0
BolC5t30002H Brassica oleracea HOM05D001392 ORTHO05D003370 2.1e-29 132.9 145 49.0
BraA09t41562Z Brassica rapa HOM05D001392 ORTHO05D003370 2.1e-29 132.9 145 50.3
CARHR015110 Cardamine hirsuta HOM05D001392 ORTHO05D003370 2.7e-29 132.5 145 49.7
BolC8t52110H Brassica oleracea HOM05D001392 ORTHO05D003370 3.5e-29 132.1 145 49.7
Sp1g12970 Schrenkiella parvula HOM05D001392 ORTHO05D003370 4.6e-29 131.7 145 49.0
Sed0018333 Sechium edule HOM05D001392 ORTHO05D003370 4.6e-29 131.7 143 51.7
AL1G26580 Arabidopsis lyrata HOM05D001392 ORTHO05D003370 6.0e-29 131.3 145 49.7
BcaC07g38749 Brassica carinata HOM05D001392 ORTHO05D003370 6.0e-29 131.3 145 50.3
Peaxi162Scf00079g00089 Petunia axillaris HOM05D001392 ORTHO05D003370 6.0e-29 131.3 145 47.6
AT1G14610 Arabidopsis thaliana HOM05D001392 ORTHO05D003370 1.7e-28 129.8 145 48.3
Potri.005G087850 Populus trichocarpa HOM05D001392 ORTHO05D003370 2.3e-28 129.4 146 47.3
RcHm_v2.0_Chr1g0376611 Rosa chinensis HOM05D001392 ORTHO05D003370 3.0e-28 129.0 146 47.9
A08p31910 Brassica napus HOM05D001392 ORTHO05D003370 5.1e-28 128.3 144 49.3
Ca_10801_v3 Cicer arietinum L. HOM05D001392 ORTHO05D003370 6.6e-28 127.9 143 51.0
CsaV3_5G005900 Cucumis sativus L. HOM05D001392 ORTHO05D003370 8.7e-28 127.5 143 50.3
Os10g0506200 Oryza sativa ssp. japonica HOM05D001392 ORTHO05D003370 8.7e-28 127.5 146 45.2
Carub.0001s1437 Capsella rubella HOM05D001392 ORTHO05D003370 1.1e-27 127.1 145 47.6
Thhalv10006628m.g Eutrema salsugineum HOM05D001392 ORTHO05D003370 1.1e-27 127.1 145 48.3
SEGI_04262 Sequoiadendron giganteum HOM05D001392 ORTHO05D003370 1.5e-27 126.7 146 44.5
MELO3C005366.2 Cucumis melo HOM05D001392 ORTHO05D003370 3.3e-27 125.6 143 49.7
Sabra07G0003000 Salix brachista HOM05D001392 ORTHO05D003370 3.3e-27 125.6 184 41.3
Phvul.007G066400 Phaseolus vulgaris HOM05D001392 ORTHO05D003370 4.3e-27 125.2 143 49.7
A08p27330 Brassica napus HOM05D001392 ORTHO05D003370 5.6e-27 124.8 146 47.3
BraA08t34676Z Brassica rapa HOM05D001392 ORTHO05D003370 5.6e-27 124.8 146 47.3
VMungo0720G1540 Vigna mungo HOM05D001392 ORTHO05D003370 5.6e-27 124.8 143 49.7
Carub.0001s3391 Capsella rubella HOM05D001392 ORTHO05D003370 1.6e-26 123.2 145 46.2
Psat6g201440 Pisum sativum HOM05D001392 ORTHO05D003370 1.6e-26 123.2 147 48.3
ClCG01G005680 Citrullus lanatus HOM05D001392 ORTHO05D003370 2.8e-26 122.5 143 49.7
Lalb_Chr12g0210011 Lupinus albus HOM05D001392 ORTHO05D003370 2.8e-26 122.5 143 49.7
TPR.G34728 Trifolium pratense HOM05D001392 ORTHO05D003370 6.2e-26 121.3 156 46.8
arahy.Tifrunner.gnm1.ann1.R98RGQ Arachis hypogaea HOM05D001392 ORTHO05D003370 3.1e-25 119.0 142 49.3
Glyma.10G239500 Glycine max HOM05D001392 ORTHO05D003370 3.1e-25 119.0 147 49.7
arahy.Tifrunner.gnm1.ann1.K04UQ8 Arachis hypogaea HOM05D001392 ORTHO05D003370 4.0e-25 118.6 142 49.3
LjContig00238g0000416 Lotus japonicus HOM05D001392 ORTHO05D003370 5.2e-25 118.2 142 50.0
TPR.G17429 Trifolium pratense HOM05D001392 ORTHO05D003370 9.0e-25 117.5 143 50.3
Oeu006731.1 Olea europaea HOM05D001392 ORTHO05D014305 2.0e-24 116.3 77 74.0
Os03g0694900 Oryza sativa ssp. japonica HOM05D001392 ORTHO05D003370 2.0e-24 116.3 146 40.4
Zm00001eb415220 Zea mays HOM05D001392 ORTHO05D003370 1.3e-23 113.6 146 39.7
BcaNung05660 Brassica carinata HOM05D001392 ORTHO05D003370 1.7e-23 113.2 145 47.6
Medtr1g101620 Medicago truncatula HOM05D001392 ORTHO05D003370 2.2e-23 112.8 147 46.3
Nitab4.5_0008025g0020 Nicotiana tabacum HOM05D001392 ORTHO05D003370 2.2e-23 112.8 197 37.1
Thhalv10006653m.g Eutrema salsugineum HOM05D001392 ORTHO05D003370 3.8e-23 112.1 150 43.3
BcaB03g13091 Brassica carinata HOM05D001392 ORTHO05D003370 4.9e-23 111.7 126 50.8
QL11p048138 Quercus lobata HOM05D001392 ORTHO05D014305 4.9e-23 111.7 107 56.1
Zm00001eb104290 Zea mays HOM05D001392 ORTHO05D003370 8.4e-23 110.9 146 38.4
Prupe.1G576900 Prunus persica HOM05D001392 ORTHO05D003370 2.4e-22 109.4 149 50.3
A07p13390 Brassica napus HOM05D001392 ORTHO05D003370 4.2e-22 108.6 149 41.6
Ciclev10004208m.g Citrus clementina HOM05D001392 ORTHO05D003370 4.2e-22 108.6 149 42.3
HPP92_001074 Vanilla planifolia HOM05D001392 ORTHO05D003370 5.4e-22 108.2 146 42.5
BcaC06g35086 Brassica carinata HOM05D001392 ORTHO05D003370 9.3e-22 107.5 149 41.6
C07p20010 Brassica napus HOM05D001392 ORTHO05D003370 1.2e-21 107.1 149 41.6
BolC7t42520H Brassica oleracea HOM05D001392 ORTHO05D003370 1.2e-21 107.1 149 41.6
Pp3c2_9830 Physcomitrium patens HOM05D001392 ORTHO05D003370 2.7e-21 105.9 148 39.2
MD17G1256800 Malus domestica HOM05D001392 ORTHO05D003370 7.8e-21 104.4 146 46.6
Peaxi162Scf00169g00036 Petunia axillaris HOM05D001392 ORTHO05D003370 7.8e-21 104.4 118 49.2
Mapoly0132s0012 Marchantia polymorpha HOM05D001392 ORTHO05D003370 1.3e-20 103.6 144 36.8
QL09p048218 Quercus lobata HOM05D001392 ORTHO05D003370 2.3e-20 102.8 100 55.0
SHI28861 Sapria himalayana HOM05D001392 ORTHO05D003370 2.3e-20 102.8 174 36.8
THA.LOC104808369 Tarenaya hassleriana HOM05D001392 ORTHO05D003370 3.0e-20 102.4 107 49.5
CARHR024700 Cardamine hirsuta HOM05D001392 ORTHO05D003370 6.6e-20 101.3 151 41.7
ECA240G1446 Erigeron canadensis HOM05D001392 ORTHO05D003370 1.1e-19 100.5 96 52.1
Nitab4.5_0000203g0010 Nicotiana tabacum HOM05D001392 ORTHO05D003370 1.1e-19 100.5 136 41.9
MD15G1433500 Malus domestica HOM05D001392 ORTHO05D003370 4.8e-18 95.1 151 41.1
CBR_g31285 Chara braunii HOM05D001392 ORTHO05D003370 1.4e-17 93.6 144 35.4
CARHR260940 Cardamine hirsuta HOM05D001392 ORTHO05D003370 5.3e-17 91.7 148 35.8
RcHm_v2.0_Chr7g0218411 Rosa chinensis HOM05D001392 ORTHO05D003370 9.0e-17 90.9 146 41.8
BcaC06g34238 Brassica carinata HOM05D001392 ORTHO05D032327 3.4e-16 89.0 112 44.6
Actinidia32900 Actinidia chinensis HOM05D001392 ORTHO05D014305 4.5e-16 88.6 148 37.8
Aqoxy2G00887 Aquilegia oxysepala HOM05D001392 ORTHO05D014305 6.4e-15 84.7 137 43.8
Haze_13765 Corylus avellana HOM05D001392 ORTHO05D014305 2.4e-14 82.8 77 53.2
RcHm_v2.0_Chr7g0232251 Rosa chinensis HOM05D001392 ORTHO05D003370 3.2e-14 82.4 121 45.5
BcaC06g35085 Brassica carinata HOM05D001392 ORTHO05D003370 2.7e-13 79.3 121 38.8
CANSAT56G2795 Cannabis sativa HOM05D001392 ORTHO05D014305 2.7e-13 79.3 79 50.6
MCO07G752 Micromonas commoda HOM05D001392 ORTHO05D003370 4.6e-13 78.6 137 35.0
BraA07t29110Z Brassica rapa HOM05D001392 ORTHO05D003370 6.0e-13 78.2 115 40.9
Carub.0005s0101 Capsella rubella HOM05D001392 ORTHO05D003370 3.9e-12 75.5 101 40.6
SMO358G0706 Selaginella moellendorffii HOM05D001392 ORTHO05D003370 8.7e-12 74.3 143 28.7
Haze_13766 Corylus avellana HOM05D001392 ORTHO05D003370 2.5e-11 72.8 75 54.7
Haze_10572 Corylus avellana HOM05D001392 ORTHO05D014305 1.3e-10 70.5 76 50.0
Nitab4.5_0004484g0010 Nicotiana tabacum HOM05D001392 ORTHO05D003370 1.6e-10 70.1 154 32.5
AagrBONN_evm.TU.Sc2ySwM_228.4580 Anthoceros agrestis HOM05D001392 ORTHO05D003370 2.1e-10 69.7 147 28.6
SMO165G0098 Selaginella moellendorffii HOM05D001392 ORTHO05D003370 3.7e-10 68.9 127 34.6
SEGI_20814 Sequoiadendron giganteum HOM05D001392 ORTHO05D003370 8.1e-10 67.8 97 43.3
Zm00001eb345100 Zea mays HOM05D000325 ORTHO05D014305 2.4e-09 66.2 142 30.3
Cre12.g537100 Chlamydomonas reinhardtii HOM05D001392 ORTHO05D003370 4.0e-09 65.5 143 28.0
Oeu001345.1 Olea europaea HOM05D001392 ORTHO05D003370 9.0e-09 64.3 38 81.6
AagrBONN_evm.TU.Sc2ySwM_344.3387 Anthoceros agrestis HOM05D001392 ORTHO05D003370 1.5e-08 63.5 166 25.9
AL3G41580 Arabidopsis lyrata HOM05D001392 ORTHO05D003370 4.5e-08 62.0 78 44.9
MD06G1107900 Malus domestica HOM05D001392 ORTHO05D014305 9.9e-08 60.8 79 48.1
AT1G27160 Arabidopsis thaliana HOM05D001392 ORTHO05D003370 1.7e-07 60.1 79 43.0
BolC4t25700H Brassica oleracea HOM05D003550 ORTHO05D032327 7.1e-06 54.7 73 43.8
C04p41180 Brassica napus HOM05D003550 ORTHO05D032327 9.3e-06 54.3 66 47.0


User provided reference genes

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