Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold44G16871 Striga asiatica HOM05D005446 ORTHO05D006597 3.2e-195 684.9 339 100.0
MSTRG.26955 Avicennia marina HOM05D005446 ORTHO05D006597 1.9e-67 260.4 174 74.7
Migut.F00126 Erythranthe guttata HOM05D005446 ORTHO05D006597 9.7e-67 258.1 174 75.3
GSVIVG01038676001 Vitis vinifera HOM05D005446 ORTHO05D006597 3.1e-65 253.1 174 70.7
Oeu029325.1 Olea europaea HOM05D005446 ORTHO05D006597 1.5e-64 250.8 174 71.8
COL.COLO4_20178 Corchorus olitorius HOM05D005446 ORTHO05D006597 7.7e-64 248.4 174 69.0
Dinv17279 Davidia involucrata HOM05D005446 ORTHO05D006597 1.0e-63 248.1 174 70.1
Haze_00330 Corylus avellana HOM05D005446 ORTHO05D006597 2.2e-63 246.9 174 70.7
Lj3A584T51 Lonicera japonica HOM05D005446 ORTHO05D006597 2.9e-63 246.5 174 69.0
Cfa016130 Carpinus fangiana HOM05D005446 ORTHO05D006597 6.5e-63 245.4 174 70.1
Thecc.04G200100 Theobroma cacao HOM05D005446 ORTHO05D006597 8.5e-63 245.0 174 68.4
TAR383G0718 Trochodendron aralioides HOM05D005446 ORTHO05D006597 1.9e-62 243.8 174 67.8
Haze_23920 Corylus avellana HOM05D005446 ORTHO05D006597 2.5e-62 243.4 174 69.5
Potri.015G001200 Populus trichocarpa HOM05D005446 ORTHO05D006597 2.5e-62 243.4 174 69.0
QL09p006048 Quercus lobata HOM05D005446 ORTHO05D006597 4.2e-62 242.7 173 68.8
Manes.18G108200 Manihot esculenta HOM05D005446 ORTHO05D006597 7.2e-62 241.9 174 69.0
MBI12_g19204_MAGBIO Magnolia biondii HOM05D005446 ORTHO05D006597 1.2e-61 241.1 175 67.4
Peaxi162Scf00192g00016 Petunia axillaris HOM05D005446 ORTHO05D006597 1.2e-61 241.1 174 69.0
Eucgr.K00475 Eucalyptus grandis HOM05D005446 ORTHO05D006597 3.6e-61 239.6 178 65.7
Peaxi162Scf00038g02639 Petunia axillaris HOM05D005446 ORTHO05D006597 3.6e-61 239.6 174 68.4
Lj1A1031T79 Lonicera japonica HOM05D005446 ORTHO05D006597 4.6e-61 239.2 174 66.7
AUR62028113 Chenopodium quinoa HOM05D005446 ORTHO05D006597 1.4e-60 237.7 174 65.5
CSS0004780 Camellia sinensis var. sinensis HOM05D005446 ORTHO05D006597 1.8e-60 237.3 174 67.2
AUR62005952 Chenopodium quinoa HOM05D005446 ORTHO05D006597 1.8e-60 237.3 174 65.5
Sabra15G0000700 Salix brachista HOM05D005446 ORTHO05D006597 1.8e-60 237.3 174 66.7
Eucgr.K00477 Eucalyptus grandis HOM05D005446 ORTHO05D006597 2.3e-60 236.9 174 65.5
Atru.chr12.2505 Acer truncatum HOM05D005446 ORTHO05D006597 3.0e-60 236.5 174 66.1
Actinidia08718 Actinidia chinensis HOM05D005446 ORTHO05D006597 3.9e-60 236.1 174 67.2
Atru.chr12.2528 Acer truncatum HOM05D005446 ORTHO05D006597 6.7e-60 235.3 174 65.5
CiPaw.06G038600 Carya illinoinensis HOM05D005446 ORTHO05D006597 6.7e-60 235.3 174 67.8
Eucgr.L02508 Eucalyptus grandis HOM05D005446 ORTHO05D006597 8.8e-60 235.0 174 65.5
Duzib151G0274 Durio zibethinus HOM05D005446 ORTHO05D006597 1.1e-59 234.6 174 66.7
Gohir.A07G102600 Gossypium hirsutum HOM05D005446 ORTHO05D006597 2.0e-59 233.8 174 63.8
Sopen01g002260 Solanum pennellii HOM05D005446 ORTHO05D006597 2.0e-59 233.8 174 67.2
Ciclev10006132m.g Citrus clementina HOM05D005446 ORTHO05D006597 2.5e-59 233.4 174 65.5
EL10Ac3g05135 Beta vulgaris HOM05D005446 ORTHO05D006597 3.3e-59 233.0 174 64.9
unitig_0.g2433 Utricularia gibba HOM05D005446 ORTHO05D006597 3.3e-59 233.0 174 68.4
Gorai.001G114700 Gossypium raimondii HOM05D005446 ORTHO05D006597 4.3e-59 232.6 174 63.8
Gohir.D07G001000 Gossypium hirsutum HOM05D005446 ORTHO05D006597 5.7e-59 232.3 174 63.8
Nn1g09694 Nelumbo nucifera HOM05D005446 ORTHO05D006597 9.7e-59 231.5 174 64.9
Potri.015G001000 Populus trichocarpa HOM05D005446 ORTHO05D006597 9.7e-59 231.5 174 66.7
vmacro06473 Vaccinium macrocarpon HOM05D005446 ORTHO05D006597 1.3e-58 231.1 174 66.7
Rhsim03G0218300 Rhododendron simsii HOM05D005446 ORTHO05D006597 2.2e-58 230.3 174 66.7
CSS0007128 Camellia sinensis var. sinensis HOM05D005446 ORTHO05D006597 2.8e-58 229.9 174 64.4
CSS0045409 Camellia sinensis var. sinensis HOM05D005446 ORTHO05D006597 2.8e-58 229.9 174 64.4
Gorai.001G000500 Gossypium raimondii HOM05D005446 ORTHO05D006597 2.8e-58 229.9 174 63.2
PGSC0003DMG400032145 Solanum tuberosum HOM05D005446 ORTHO05D006597 2.8e-58 229.9 174 66.1
Cc02_g16080 Coffea canephora HOM05D005446 ORTHO05D006597 6.3e-58 228.8 174 67.2
Glyma.02G221100 Glycine max HOM05D005446 ORTHO05D006597 1.4e-57 227.6 174 66.1
Hund09744 Selenicereus undatus HOM05D005446 ORTHO05D006597 1.4e-57 227.6 174 64.9
TWI18G0511 Tripterygium wilfordii HOM05D005446 ORTHO05D006597 1.4e-57 227.6 174 63.2
Gohir.D07G106600 Gossypium hirsutum HOM05D005446 ORTHO05D006597 1.8e-57 227.3 174 62.6
Phvul.001G010300 Phaseolus vulgaris HOM05D005446 ORTHO05D006597 5.3e-57 225.7 174 66.1
Phvul.008G188200 Phaseolus vulgaris HOM05D005446 ORTHO05D006597 5.3e-57 225.7 174 66.1
Glyma.14G188600 Glycine max HOM05D005446 ORTHO05D006597 9.1e-57 224.9 174 66.1
Gohir.A03G015000 Gossypium hirsutum HOM05D005446 ORTHO05D006597 2.6e-56 223.4 174 63.8
Phvul.L008700 Phaseolus vulgaris HOM05D005446 ORTHO05D006597 2.6e-56 223.4 174 65.5
Phvul.003G000356 Phaseolus vulgaris HOM05D005446 ORTHO05D006597 5.9e-56 222.2 174 65.5
CAN.G140.1 Capsicum annuum HOM05D005446 ORTHO05D006597 7.7e-56 221.9 174 64.4
Cpa.g.sc3.182 Carica papaya HOM05D005446 ORTHO05D006597 1.3e-55 221.1 174 60.9
ClCG09G010380 Citrullus lanatus HOM05D005446 ORTHO05D006597 3.8e-55 219.5 174 63.2
DCAR_008034 Daucus carota HOM05D005446 ORTHO05D006597 5.0e-55 219.2 172 64.0
Aqoxy5G00887 Aquilegia oxysepala HOM05D005446 ORTHO05D006597 8.5e-55 218.4 171 62.6
CsaV3_7G024240 Cucumis sativus L. HOM05D005446 ORTHO05D006597 8.5e-55 218.4 174 63.8
FvH4_7g33290 Fragaria vesca HOM05D005446 ORTHO05D006597 1.9e-54 217.2 174 63.8
CANSAT64G2376 Cannabis sativa HOM05D005446 ORTHO05D006597 2.5e-54 216.9 174 62.6
Nitab4.5_0005132g0070 Nicotiana tabacum HOM05D005446 ORTHO05D006597 2.5e-54 216.9 156 69.9
PSO782G3129 Papaver somniferum HOM05D005446 ORTHO05D006597 2.5e-54 216.9 174 61.5
FAN01G0680 Fragaria x ananassa HOM05D005446 ORTHO05D006597 3.2e-54 216.5 174 63.2
CDE07G1092 Ceratophyllum demersum HOM05D005446 ORTHO05D006597 5.5e-54 215.7 174 59.8
FAN03G2203 Fragaria x ananassa HOM05D005446 ORTHO05D006597 5.5e-54 215.7 174 62.6
PSO170G1626 Papaver somniferum HOM05D005446 ORTHO05D006597 5.5e-54 215.7 174 60.9
ECA247G1253 Erigeron canadensis HOM05D005446 ORTHO05D006597 7.2e-54 215.3 174 62.1
FAN10G1830 Fragaria x ananassa HOM05D005446 ORTHO05D006597 7.2e-54 215.3 174 62.6
Lalb_Chr10g0102991 Lupinus albus HOM05D005446 ORTHO05D006597 9.4e-54 214.9 174 62.6
Solyc01g006260.4 Solanum lycopersicum HOM05D005446 ORTHO05D006597 1.2e-53 214.5 164 65.9
TAR629G0354 Trochodendron aralioides HOM05D005446 ORTHO05D006597 1.2e-53 214.5 164 64.0
Aa31LG10G6780 Aethionema arabicum HOM05D005446 ORTHO05D006597 1.6e-53 214.2 173 63.0
LjContig00155g0018941 Lotus japonicus HOM05D005446 ORTHO05D006597 2.7e-53 213.4 174 62.6
Ah.13g071020 Amaranthus hybridus HOM05D005446 ORTHO05D006597 3.6e-53 213.0 233 50.6
MELO3C023673.2 Cucumis melo HOM05D005446 ORTHO05D006597 6.1e-53 212.2 174 62.6
SHI13471 Sapria himalayana HOM05D005446 ORTHO05D006597 6.1e-53 212.2 190 57.9
HanXRQChr02g0037361 Helianthus annuus HOM05D005446 ORTHO05D006597 7.9e-53 211.8 174 62.1
RcHm_v2.0_Chr1g0383271 Rosa chinensis HOM05D005446 ORTHO05D006597 7.9e-53 211.8 174 61.5
Sed0027394 Sechium edule HOM05D005446 ORTHO05D006597 6.7e-52 208.8 174 60.9
Medtr5g068650 Medicago truncatula HOM05D005446 ORTHO05D006597 1.5e-51 207.6 171 61.4
Nitab4.5_0022559g0010 Nicotiana tabacum HOM05D005446 ORTHO05D006597 2.0e-51 207.2 146 70.5
VMungo0647G1380 Vigna mungo HOM05D005446 ORTHO05D006597 3.3e-51 206.5 166 63.9
Os04g0295100 Oryza sativa ssp. japonica HOM05D005446 ORTHO05D006597 7.4e-51 205.3 173 61.3
Prupe.2G321800 Prunus persica HOM05D005446 ORTHO05D006597 7.4e-51 205.3 174 58.6
HanXRQChr02g0037371 Helianthus annuus HOM05D005446 ORTHO05D006597 1.7e-50 204.1 170 60.6
Lsat_1_v5_gn_1_26901 Lactuca sativa HOM05D005446 ORTHO05D006597 1.7e-50 204.1 174 60.9
MD07G1303100 Malus domestica HOM05D005446 ORTHO05D006597 1.7e-50 204.1 174 58.6
CARHR003990 Cardamine hirsuta HOM05D005446 ORTHO05D006597 2.2e-50 203.8 175 61.1
Ca_05549_v3 Cicer arietinum L. HOM05D005446 ORTHO05D006597 2.8e-50 203.4 171 59.6
Eucgr.K00052 Eucalyptus grandis HOM05D005446 ORTHO05D006597 8.2e-50 201.8 169 61.5
AL1G14320 Arabidopsis lyrata HOM05D005446 ORTHO05D006597 1.4e-49 201.1 175 60.0
DCAR_019328 Daucus carota HOM05D005446 ORTHO05D006597 1.8e-49 200.7 152 67.1
RcHm_v2.0_Chr3g0479561 Rosa chinensis HOM05D005446 ORTHO05D006597 3.1e-49 199.9 174 59.2
Carub.0001s0387 Capsella rubella HOM05D005446 ORTHO05D006597 4.1e-49 199.5 175 60.0
ATR0579G170 Amborella trichopoda HOM05D005446 ORTHO05D006597 7.0e-49 198.7 166 59.6
Eucgr.K00059 Eucalyptus grandis HOM05D005446 ORTHO05D006597 1.5e-48 197.6 169 60.9
Zm00001eb200370 Zea mays HOM05D005446 ORTHO05D006597 4.5e-48 196.1 172 57.6
AT1G04635 Arabidopsis thaliana HOM05D005446 ORTHO05D006597 7.7e-48 195.3 175 59.4
Thhalv10009004m.g Eutrema salsugineum HOM05D005446 ORTHO05D006597 1.4e-46 191.0 175 56.6
MD01G1231100 Malus domestica HOM05D005446 ORTHO05D006597 1.9e-46 190.7 166 58.4
TPR.G5849 Trifolium pratense HOM05D005446 ORTHO05D006597 4.2e-46 189.5 171 57.3
Os05g0270500 Oryza sativa ssp. japonica HOM05D005446 ORTHO05D006597 1.2e-45 188.0 168 58.3
QL04p035447 Quercus lobata HOM05D005446 ORTHO05D006597 2.7e-45 186.8 165 58.2
THA.LOC104820657 Tarenaya hassleriana HOM05D005446 ORTHO05D006597 8.8e-44 181.8 175 54.9
MD07G1302900 Malus domestica HOM05D005446 ORTHO05D006597 1.1e-43 181.4 174 54.0
HPP92_023794 Vanilla planifolia HOM05D005446 ORTHO05D006597 2.0e-43 180.6 174 53.4
Sp4g14630 Schrenkiella parvula HOM05D005446 ORTHO05D006597 2.6e-43 180.3 171 52.6
Sp1g03470 Schrenkiella parvula HOM05D005446 ORTHO05D006597 3.7e-42 176.4 172 52.3
A10p03070 Brassica napus HOM05D002401 ORTHO05D007109 8.2e-42 175.3 173 50.3
C05p02830 Brassica napus HOM05D002401 ORTHO05D007109 8.2e-42 175.3 173 50.9
BolC5t29066H Brassica oleracea HOM05D002401 ORTHO05D007109 8.2e-42 175.3 173 50.9
BraA10t42580Z Brassica rapa HOM05D002401 ORTHO05D007109 3.1e-41 173.3 173 50.3
Thhalv10017414m.g Eutrema salsugineum HOM05D005446 ORTHO05D006597 2.5e-38 163.7 147 55.8
PGR142G4477 Punica granatum HOM05D005446 ORTHO05D006597 2.5e-38 163.7 172 49.4
TAR362G0055 Trochodendron aralioides HOM05D005446 ORTHO05D006597 1.2e-37 161.4 133 62.4
Psat2g060440 Pisum sativum HOM05D005446 ORTHO05D006597 3.0e-36 156.8 165 50.3
Sc13g0010680 Simmondsia chinensis HOM05D005446 ORTHO05D006597 1.5e-35 154.5 118 66.9
Ciclev10023849m.g Citrus clementina HOM05D005446 ORTHO05D006597 4.1e-33 146.4 122 59.0
arahy.Tifrunner.gnm1.ann1.PTVQ9K Arachis hypogaea HOM05D005446 ORTHO05D006597 2.0e-32 144.1 125 56.0
arahy.Tifrunner.gnm1.ann1.G1Q0KH Arachis hypogaea HOM05D005446 ORTHO05D006597 7.7e-32 142.1 125 56.8
Oeu055421.1 Olea europaea HOM05D005446 ORTHO05D006597 2.2e-31 140.6 125 58.4
SEGI_01150 Sequoiadendron giganteum HOM05D005446 ORTHO05D006597 6.5e-31 139.0 163 42.9
QL09p006057 Quercus lobata HOM05D000605 ORTHO05D001937 2.5e-30 137.1 80 80.0
FAN10G3034 Fragaria x ananassa HOM05D005446 ORTHO05D006597 4.2e-30 136.3 123 57.7
QL09p006020 Quercus lobata HOM05D005446 ORTHO05D006597 2.7e-29 133.7 110 60.9
CDE05G0789 Ceratophyllum demersum HOM05D002553 ORTHO05D002767 1.4e-28 131.3 159 45.9
AagrBONN_evm.TU.Sc2ySwM_117.1519 Anthoceros agrestis HOM05D005446 ORTHO05D006597 3.1e-25 120.2 167 39.5
TPR.G27917 Trifolium pratense HOM05D005446 ORTHO05D006597 2.0e-24 117.5 171 42.7
Pp3c14_9250 Physcomitrium patens HOM05D005446 ORTHO05D006597 2.9e-23 113.6 147 44.2
Phvul.L004350 Phaseolus vulgaris HOM05D005446 ORTHO05D006597 2.6e-19 100.5 68 70.6
Phvul.003G000382 Phaseolus vulgaris HOM05D005446 ORTHO05D006597 1.2e-16 91.7 60 73.3
Phvul.L006525 Phaseolus vulgaris HOM05D005446 ORTHO05D006597 1.2e-16 91.7 60 73.3
Mapoly0096s0024 Marchantia polymorpha HOM05D005446 ORTHO05D006597 7.8e-16 89.0 149 35.6
MELO3C018158.2 Cucumis melo HOM05D005446 ORTHO05D006597 1.3e-15 88.2 68 61.8
SMO356G0648 Selaginella moellendorffii HOM05D005446 ORTHO05D006597 6.6e-15 85.9 154 32.5
Psat2g148960 Pisum sativum HOM05D005446 ORTHO05D006597 2.2e-10 70.9 69 52.2
Cre01.g026100 Chlamydomonas reinhardtii HOM05D005446 ORTHO05D006597 1.1e-09 68.6 159 27.7


User provided reference genes

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