Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold44G16540 Striga asiatica HOM05D003995 ORTHO05D004800 0.0e+00 1359.7 704 100.0
Migut.H00960 Erythranthe guttata HOM05D003995 ORTHO05D004800 7.2e-250 867.5 710 67.5
MSTRG.23509 Avicennia marina HOM05D003995 ORTHO05D004800 4.0e-248 861.7 712 66.0
Oeu017626.1 Olea europaea HOM05D003995 ORTHO05D004800 2.1e-233 812.8 713 63.4
Oeu050081.1 Olea europaea HOM05D003995 ORTHO05D004800 4.1e-229 798.5 710 63.9
SalBow1G2060 Salvia bowleyana HOM05D003995 ORTHO05D004800 6.8e-216 754.6 740 58.8
Cc00_g10390 Coffea canephora HOM05D003995 ORTHO05D004800 2.9e-214 749.2 716 59.8
Peaxi162Scf00090g00073 Petunia axillaris HOM05D003995 ORTHO05D004800 5.2e-208 728.4 716 59.2
Hma1.2p1_0659F.1_g197350 Hydrangea macrophylla HOM05D003995 ORTHO05D004800 2.0e-207 726.5 713 59.7
Nitab4.5_0002549g0020 Nicotiana tabacum HOM05D003995 ORTHO05D004800 2.2e-206 723.0 712 59.4
Hma1.2p1_1689F.1_g297670 Hydrangea macrophylla HOM05D003995 ORTHO05D004800 3.8e-206 722.2 716 59.2
GSVIVG01017039001 Vitis vinifera HOM05D003995 ORTHO05D004800 4.2e-205 718.8 717 57.3
CAN.G60.5 Capsicum annuum HOM05D003995 ORTHO05D004800 1.6e-204 716.8 715 58.6
Actinidia21699 Actinidia chinensis HOM05D003995 ORTHO05D004800 3.5e-204 715.7 722 57.8
CSS0043166 Camellia sinensis var. sinensis HOM05D003995 ORTHO05D004800 4.3e-202 708.8 720 57.4
COL.COLO4_30474 Corchorus olitorius HOM05D003995 ORTHO05D004800 3.6e-201 705.7 711 57.0
PGSC0003DMG400008535 Solanum tuberosum HOM05D003995 ORTHO05D004800 1.1e-200 704.1 720 58.3
CSS0042187 Camellia sinensis var. sinensis HOM05D003995 ORTHO05D004800 1.8e-200 703.4 719 57.4
TAR624G1104 Trochodendron aralioides HOM05D003995 ORTHO05D004800 1.2e-199 700.7 724 57.0
Cfa002115 Carpinus fangiana HOM05D003995 ORTHO05D004800 2.0e-199 699.9 719 56.5
Thecc.06G096000 Theobroma cacao HOM05D003995 ORTHO05D004800 4.4e-199 698.7 719 56.1
Dinv30461 Davidia involucrata HOM05D003995 ORTHO05D004800 1.7e-198 696.8 714 57.3
Gorai.009G136200 Gossypium raimondii HOM05D003995 ORTHO05D004800 4.9e-198 695.3 717 56.1
QL05p021104 Quercus lobata HOM05D003995 ORTHO05D004800 3.5e-196 689.1 718 56.3
CiPaw.02G147500 Carya illinoinensis HOM05D003995 ORTHO05D004800 6.0e-196 688.3 714 55.7
Haze_16334 Corylus avellana HOM05D003995 ORTHO05D004800 7.8e-196 688.0 736 54.9
Gohir.A05G128000 Gossypium hirsutum HOM05D003995 ORTHO05D004800 3.9e-195 685.6 717 55.2
Gohir.A02G119100 Gossypium hirsutum HOM05D003995 ORTHO05D004800 6.6e-195 684.9 718 55.0
Gohir.D05G132500 Gossypium hirsutum HOM05D003995 ORTHO05D004800 6.6e-195 684.9 717 55.5
FvH4_6g32000 Fragaria vesca HOM05D003995 ORTHO05D004800 1.5e-194 683.7 715 54.4
Gohir.D03G059900 Gossypium hirsutum HOM05D003995 ORTHO05D004800 1.4e-192 677.2 715 55.0
Dinv38000 Davidia involucrata HOM05D003995 ORTHO05D004800 1.8e-192 676.8 701 56.5
arahy.Tifrunner.gnm1.ann1.8U94IH Arachis hypogaea HOM05D003995 ORTHO05D004800 2.4e-192 676.4 713 54.7
TWI75G1811 Tripterygium wilfordii HOM05D003995 ORTHO05D004800 2.4e-192 676.4 725 54.8
Solyc04g047770.3 Solanum lycopersicum HOM05D003995 ORTHO05D004800 4.5e-191 672.2 716 56.1
Sopen04g017970 Solanum pennellii HOM05D003995 ORTHO05D004800 7.6e-191 671.4 716 56.0
CSS0032416 Camellia sinensis var. sinensis HOM05D003995 ORTHO05D004800 3.8e-190 669.1 702 55.1
Gorai.003G063800 Gossypium raimondii HOM05D003995 ORTHO05D004800 6.4e-190 668.3 707 54.7
Lj3g0012728 Lotus japonicus HOM05D003995 ORTHO05D004800 8.4e-190 667.9 714 53.5
Manes.04G131700 Manihot esculenta HOM05D003995 ORTHO05D004800 1.1e-189 667.5 720 53.9
MD09G1207100 Malus domestica HOM05D003995 ORTHO05D004800 1.9e-189 666.8 725 54.3
CiPaw.01G233700 Carya illinoinensis HOM05D003995 ORTHO05D004800 2.4e-189 666.4 719 55.6
Potri.001G187000 Populus trichocarpa HOM05D003995 ORTHO05D004800 4.2e-189 665.6 718 53.8
PSO210G6397 Papaver somniferum HOM05D003995 ORTHO05D004800 7.1e-189 664.8 729 53.8
Manes.11G036200 Manihot esculenta HOM05D003995 ORTHO05D004800 2.1e-188 663.3 735 52.5
Nitab4.5_0004354g0010 Nicotiana tabacum HOM05D003995 ORTHO05D004800 2.1e-188 663.3 873 48.7
PSO210G6330 Papaver somniferum HOM05D003995 ORTHO05D004800 2.7e-188 662.9 731 54.3
Sc12g0009570 Simmondsia chinensis HOM05D003995 ORTHO05D004800 1.0e-187 661.0 725 54.9
Medtr8g013720 Medicago truncatula HOM05D003995 ORTHO05D004800 1.3e-187 660.6 723 54.1
FAN05G2434 Fragaria x ananassa HOM05D003995 ORTHO05D004800 5.1e-187 658.7 752 51.9
TWI12G0239 Tripterygium wilfordii HOM05D003995 ORTHO05D004800 5.1e-187 658.7 727 53.1
Glyma.07G017700 Glycine max HOM05D003995 ORTHO05D004800 6.7e-187 658.3 717 53.7
Prupe.3G063200 Prunus persica HOM05D003995 ORTHO05D004800 6.7e-187 658.3 721 54.0
TWI18G0079 Tripterygium wilfordii HOM05D003995 ORTHO05D004800 2.5e-186 656.4 727 53.5
Aqoxy7G01498 Aquilegia oxysepala HOM05D003995 ORTHO05D004800 4.3e-186 655.6 733 54.6
VMungo0331G0049 Vigna mungo HOM05D003995 ORTHO05D004800 2.1e-185 653.3 713 53.9
FAN14G0476 Fragaria x ananassa HOM05D003995 ORTHO05D004800 2.8e-185 652.9 715 53.1
CANSAT56G4226 Cannabis sativa HOM05D003995 ORTHO05D004800 6.2e-185 651.7 728 53.8
Duzib235G0154 Durio zibethinus HOM05D003995 ORTHO05D004800 1.8e-184 650.2 702 54.6
TAR102G0002 Trochodendron aralioides HOM05D003995 ORTHO05D004800 2.4e-184 649.8 725 52.8
Atru.chr1.3467 Acer truncatum HOM05D003995 ORTHO05D004800 1.5e-183 647.1 704 54.8
DCAR_019957 Daucus carota HOM05D003995 ORTHO05D004800 4.5e-183 645.6 717 54.0
Psat4g198440 Pisum sativum HOM05D003995 ORTHO05D004800 4.5e-183 645.6 724 52.3
Lalb_Chr01g0013091 Lupinus albus HOM05D003995 ORTHO05D004800 7.6e-183 644.8 710 52.3
TPR.G14825 Trifolium pratense HOM05D003995 ORTHO05D004800 7.6e-183 644.8 718 52.5
Phvul.010G147000 Phaseolus vulgaris HOM05D003995 ORTHO05D004800 4.9e-182 642.1 712 52.9
Carub.0003s1602 Capsella rubella HOM05D003995 ORTHO05D004800 7.1e-181 638.3 717 53.3
Cpa.g.sc109.33 Carica papaya HOM05D003995 ORTHO05D004800 7.1e-181 638.3 702 54.6
Lsat_1_v5_gn_2_39201 Lactuca sativa HOM05D003995 ORTHO05D004800 7.1e-181 638.3 723 53.5
CARHR091480 Cardamine hirsuta HOM05D003995 ORTHO05D004800 1.6e-180 637.1 713 53.0
THA.LOC104810534 Tarenaya hassleriana HOM05D003995 ORTHO05D004800 1.6e-180 637.1 715 53.7
Aa31LG8G3420 Aethionema arabicum HOM05D003995 ORTHO05D004800 2.1e-180 636.7 713 52.7
Ca_11524_v3 Cicer arietinum L. HOM05D003995 ORTHO05D004800 2.1e-180 636.7 720 51.7
HanXRQChr14g0434431 Helianthus annuus HOM05D003995 ORTHO05D004800 2.1e-180 636.7 723 54.1
THA.LOC104817968 Tarenaya hassleriana HOM05D003995 ORTHO05D004800 3.5e-180 636.0 714 53.4
MD17G1187800 Malus domestica HOM05D003995 ORTHO05D004800 7.9e-180 634.8 732 52.9
BcaC05g28900 Brassica carinata HOM05D003995 ORTHO05D004800 2.3e-179 633.3 715 53.0
BolC5t33775H Brassica oleracea HOM05D003995 ORTHO05D004800 2.3e-179 633.3 715 53.0
AL3G29010 Arabidopsis lyrata HOM05D003995 ORTHO05D004800 3.9e-179 632.5 717 52.7
Sp3g14640 Schrenkiella parvula HOM05D003995 ORTHO05D004800 5.1e-179 632.1 721 52.3
AT3G16270 Arabidopsis thaliana HOM05D003995 ORTHO05D004800 1.5e-178 630.6 712 52.5
Gorai.010G229800 Gossypium raimondii HOM05D003995 ORTHO05D004800 1.9e-178 630.2 717 52.6
Ciclev10027380m.g Citrus clementina HOM05D003995 ORTHO05D004800 4.3e-178 629.0 737 52.2
Lalb_Chr25g0280081 Lupinus albus HOM05D003995 ORTHO05D004800 7.4e-178 628.2 710 52.0
Sed0011470 Sechium edule HOM05D003995 ORTHO05D004800 7.4e-178 628.2 714 51.8
BraA05t22150Z Brassica rapa HOM05D003995 ORTHO05D004800 1.3e-177 627.5 716 52.9
Hund06648 Selenicereus undatus HOM05D003995 ORTHO05D004800 2.1e-177 626.7 717 52.6
BcaB06g25717 Brassica carinata HOM05D003995 ORTHO05D004800 2.8e-177 626.3 718 53.2
CsaV3_3G023750 Cucumis sativus L. HOM05D003995 ORTHO05D004800 2.8e-177 626.3 719 53.0
Eucgr.J02949 Eucalyptus grandis HOM05D003995 ORTHO05D004800 6.2e-177 625.2 732 51.2
Thhalv10020187m.g Eutrema salsugineum HOM05D003995 ORTHO05D004800 6.2e-177 625.2 713 51.9
PGR102G1287 Punica granatum HOM05D003995 ORTHO05D004800 6.2e-177 625.2 723 52.1
C05p50240 Brassica napus HOM05D003995 ORTHO05D004800 1.1e-176 624.4 715 52.6
FAN02G0974 Fragaria x ananassa HOM05D003995 ORTHO05D004800 1.1e-176 624.4 720 51.7
Gohir.D06G197450 Gossypium hirsutum HOM05D003995 ORTHO05D004800 2.4e-176 623.2 717 52.3
A05p33250 Brassica napus HOM05D003995 ORTHO05D004800 3.4e-175 619.4 718 52.8
FAN09G2208 Fragaria x ananassa HOM05D003995 ORTHO05D004800 3.4e-175 619.4 720 51.4
AUR62031875 Chenopodium quinoa HOM05D003995 ORTHO05D004800 2.9e-174 616.3 713 50.8
EL10Ac9g22110 Beta vulgaris HOM05D003995 ORTHO05D004800 9.3e-173 611.3 720 51.0
Glyma.08G202900 Glycine max HOM05D003995 ORTHO05D004800 3.5e-172 609.4 717 50.9
Rhsim08G0225700 Rhododendron simsii HOM05D003995 ORTHO05D004800 3.0e-171 606.3 715 51.5
Sed0003559 Sechium edule HOM05D003995 ORTHO05D004800 3.0e-171 606.3 719 52.2
Ah.01g005620 Amaranthus hybridus HOM05D003995 ORTHO05D004800 5.1e-171 605.5 720 51.4
PGR102G1422 Punica granatum HOM05D003995 ORTHO05D004800 1.9e-170 603.6 721 51.9
HanXRQChr01g0017801 Helianthus annuus HOM05D003995 ORTHO05D004800 6.3e-169 598.6 717 52.0
AUR62022169 Chenopodium quinoa HOM05D003995 ORTHO05D004800 2.0e-167 593.6 712 49.9
Eucgr.F03056 Eucalyptus grandis HOM05D003995 ORTHO05D004800 3.4e-167 592.8 719 50.9
ATR0705G117 Amborella trichopoda HOM05D003995 ORTHO05D004800 1.0e-166 591.3 740 50.0
Ah.01g021840 Amaranthus hybridus HOM05D003995 ORTHO05D004800 2.5e-165 586.6 708 51.7
MBI04_g27074_MAGBIO Magnolia biondii HOM05D003266 ORTHO05D003718 4.6e-164 582.4 729 49.9
Glyma.13G355800 Glycine max HOM05D003995 ORTHO05D004800 5.7e-162 575.5 724 47.5
ECA248G2833 Erigeron canadensis HOM05D003995 ORTHO05D004800 1.1e-160 571.2 704 51.6
CDE08G1118 Ceratophyllum demersum HOM05D003995 ORTHO05D004800 5.0e-158 562.4 726 48.1
CDE02G3541 Ceratophyllum demersum HOM05D003995 ORTHO05D004800 2.1e-156 557.0 727 47.9
Os01g0232400 Oryza sativa ssp. japonica HOM05D003995 ORTHO05D004800 2.7e-156 556.6 711 48.0
Zm00001eb339300 Zea mays HOM05D003995 ORTHO05D004800 1.1e-154 551.2 707 49.6
SalBow1G1048 Salvia bowleyana HOM05D003995 ORTHO05D004800 3.3e-154 549.7 374 77.5
SalBow1G5856 Salvia bowleyana HOM05D003995 ORTHO05D004800 3.3e-154 549.7 374 77.5
VMungo1080G0563 Vigna mungo HOM05D003995 ORTHO05D004800 2.1e-148 530.4 714 45.7
Zm00001eb119170 Zea mays HOM05D003995 ORTHO05D004800 4.7e-148 529.3 707 48.2
Phvul.005G170500 Phaseolus vulgaris HOM05D003995 ORTHO05D004800 5.2e-147 525.8 735 45.2
Nn2g11632 Nelumbo nucifera HOM05D003995 ORTHO05D004800 1.4e-144 517.7 721 47.6
MELO3C012986.2 Cucumis melo HOM05D003995 ORTHO05D004800 1.6e-143 514.2 645 50.1
HPP92_008092 Vanilla planifolia HOM05D003995 ORTHO05D004800 3.6e-140 503.1 745 46.3
SHI11063 Sapria himalayana HOM05D003995 ORTHO05D004800 8.3e-137 491.9 701 46.5
Nn3g18163 Nelumbo nucifera HOM05D003995 ORTHO05D004800 3.5e-135 486.5 380 68.9
SEGI_23305 Sequoiadendron giganteum HOM05D003995 ORTHO05D004800 8.6e-126 455.3 743 40.5
Gohir.A06G188875 Gossypium hirsutum HOM05D003995 ORTHO05D004800 2.3e-118 430.6 374 62.3
vmacro18871 Vaccinium macrocarpon HOM05D003995 ORTHO05D004800 2.7e-111 407.1 322 67.4
Lj4A820G41 Lonicera japonica HOM05D003995 ORTHO05D004800 7.8e-111 405.6 553 49.5
MBI01_g24453_MAGBIO Magnolia biondii HOM05D003995 ORTHO05D004800 8.6e-110 402.1 710 42.0
RcHm_v2.0_Chr2g0139591 Rosa chinensis HOM05D003995 ORTHO05D004800 7.8e-103 379.0 321 64.2
QL04p048641 Quercus lobata HOM05D003995 ORTHO05D004800 4.3e-101 373.2 611 42.2
SMO340G0180 Selaginella moellendorffii HOM05D003995 ORTHO05D004800 9.2e-96 355.5 468 45.9
Mapoly0022s0096 Marchantia polymorpha HOM05D003995 ORTHO05D004800 7.6e-90 335.9 767 36.5
Pp3c2_17390 Physcomitrium patens HOM05D003995 ORTHO05D004800 3.2e-88 330.5 752 36.2
AagrBONN_evm.TU.Sc2ySwM_362.567 Anthoceros agrestis HOM05D003995 ORTHO05D004800 1.9e-85 321.2 768 34.8
arahy.Tifrunner.gnm1.ann1.QE1TJP Arachis hypogaea HOM05D003995 ORTHO05D004800 7.6e-74 282.7 390 45.1
RcHm_v2.0_Chr2g0139601 Rosa chinensis HOM05D003995 ORTHO05D004800 1.3e-73 282.0 403 44.9
Hund00665 Selenicereus undatus HOM05D003995 ORTHO05D004800 1.7e-73 281.6 484 39.5
Sabra01G0153300 Salix brachista HOM05D003995 ORTHO05D004800 3.7e-68 263.8 397 44.1
MBI01_g39826_MAGBIO Magnolia biondii HOM05D003995 ORTHO05D004800 1.4e-67 261.9 644 34.9
Actinidia39150 Actinidia chinensis HOM05D003995 ORTHO05D004800 2.5e-61 241.1 402 43.8
CBR_g36315 Chara braunii HOM05D003995 ORTHO05D004800 1.4e-59 235.3 584 32.2
Actinidia32710 Actinidia chinensis HOM05D003995 ORTHO05D004800 1.2e-50 205.7 152 71.1
CBR_g31940 Chara braunii HOM05D003995 ORTHO05D004800 1.3e-49 202.2 874 26.5
vmacro18870 Vaccinium macrocarpon HOM05D003995 ORTHO05D004800 3.9e-46 190.7 350 39.1
ClCG07G013220 Citrullus lanatus HOM05D003995 ORTHO05D004800 4.1e-43 180.6 333 40.2
CDE02G4060 Ceratophyllum demersum HOM05D003995 ORTHO05D004800 1.6e-39 168.7 234 43.2
CBR_g25753 Chara braunii HOM05D003995 ORTHO05D004800 2.3e-38 164.9 207 43.0
Actinidia32709 Actinidia chinensis HOM05D003995 ORTHO05D004800 3.9e-38 164.1 352 37.5
Actinidia09000 Actinidia chinensis HOM05D003995 ORTHO05D004800 5.9e-34 150.2 171 53.2
Cre12.g545300 Chlamydomonas reinhardtii HOM05D003995 ORTHO05D004800 2.3e-30 138.3 387 28.9
HanXRQChr10g0310971 Helianthus annuus HOM05D003995 ORTHO05D004800 1.5e-29 135.6 165 50.3
Cre12.g545150 Chlamydomonas reinhardtii HOM05D003995 ORTHO05D004800 1.4e-27 129.0 395 28.4
Glyma.15G018300 Glycine max HOM05D003995 ORTHO05D004800 7.0e-27 126.7 255 36.1
Lj4C820T9 Lonicera japonica HOM05D003995 ORTHO05D004800 1.6e-26 125.6 69 88.4
FAN18G0014 Fragaria x ananassa HOM05D003995 ORTHO05D004800 6.5e-25 120.2 69 82.6
PRCOL_00002233 Prasinoderma coloniale HOM05D003995 ORTHO05D004800 1.8e-22 112.1 500 26.6
MBI07_g11499_MAGBIO Magnolia biondii HOM05D003995 ORTHO05D004800 2.6e-21 108.2 62 87.1
Actinidia08998 Actinidia chinensis HOM05D003995 ORTHO05D004800 1.1e-19 102.8 57 87.7
FvH4_5g23151 Fragaria vesca HOM05D003995 ORTHO05D004800 1.2e-15 89.4 51 80.4
FvH4_7g32131 Fragaria vesca HOM05D003995 ORTHO05D004800 1.0e-14 86.3 51 78.4
SEGI_12342 Sequoiadendron giganteum HOM05D003995 ORTHO05D004800 1.4e-14 85.9 82 46.3
Lsat_1_v5_gn_7_27180 Lactuca sativa HOM05D003995 ORTHO05D004605 4.0e-14 84.3 58 70.7
Actinidia39149 Actinidia chinensis HOM05D003995 ORTHO05D004800 1.8e-11 75.5 156 39.1
MCO13G545 Micromonas commoda HOM05D003995 ORTHO05D004800 1.7e-09 68.9 107 35.5
Pp3c1_18430 Physcomitrium patens HOM05D003995 ORTHO05D004800 2.9e-09 68.2 422 26.5
MBI03_g21265_MAGBIO Magnolia biondii HOM05D003995 ORTHO05D004800 1.5e-08 65.9 92 45.7
Gohir.D03G024850 Gossypium hirsutum HOM05D003995 ORTHO05D004800 2.5e-08 65.1 92 43.5
Gorai.003G083400 Gossypium raimondii HOM05D003995 ORTHO05D004800 4.3e-08 64.3 98 40.8


User provided reference genes

Program Settings