Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold4316G54468 Striga asiatica HOM05D004354 ORTHO05D005409 1.8e-113 412.5 200 100.0
Migut.M00279 Erythranthe guttata HOM05D004354 ORTHO05D005409 1.9e-86 322.8 197 77.2
Oeu036067.1 Olea europaea HOM05D004354 ORTHO05D005409 4.3e-83 311.6 198 76.8
Nitab4.5_0006194g0010 Nicotiana tabacum HOM05D004354 ORTHO05D005409 1.1e-81 307.0 196 76.0
Peaxi162Scf01415g00030 Petunia axillaris HOM05D004354 ORTHO05D005409 3.1e-81 305.4 196 74.5
MSTRG.6802 Avicennia marina HOM05D004354 ORTHO05D005409 5.3e-81 304.7 198 74.7
FAN02G3736 Fragaria x ananassa HOM05D004354 ORTHO05D005409 4.5e-80 301.6 196 74.0
Nitab4.5_0000638g0120 Nicotiana tabacum HOM05D004354 ORTHO05D005409 5.9e-80 301.2 196 73.0
Dinv13394 Davidia involucrata HOM05D004354 ORTHO05D005409 1.0e-79 300.4 198 74.7
Hma1.2p1_0002F.1_g002080 Hydrangea macrophylla HOM05D004354 ORTHO05D005409 1.0e-79 300.4 198 74.7
Dinv04814 Davidia involucrata HOM05D004354 ORTHO05D005409 1.7e-79 299.7 198 74.2
Rhsim06G0139400 Rhododendron simsii HOM05D004354 ORTHO05D005409 2.2e-79 299.3 198 72.7
CSS0014582 Camellia sinensis var. sinensis HOM05D004354 ORTHO05D005409 2.9e-79 298.9 198 74.7
Nn1g06483 Nelumbo nucifera HOM05D004354 ORTHO05D005409 2.9e-79 298.9 198 74.2
Nitab4.5_0001752g0070 Nicotiana tabacum HOM05D004354 ORTHO05D005409 3.8e-79 298.5 196 73.0
CiPaw.03G179000 Carya illinoinensis HOM05D004354 ORTHO05D005409 5.0e-79 298.1 198 73.2
COL.COLO4_05947 Corchorus olitorius HOM05D004354 ORTHO05D005409 5.0e-79 298.1 198 73.2
Ciclev10014745m.g Citrus clementina HOM05D004354 ORTHO05D005409 6.5e-79 297.7 198 73.7
DCAR_009753 Daucus carota HOM05D004354 ORTHO05D005409 6.5e-79 297.7 198 71.7
Sopen12g001470 Solanum pennellii HOM05D004354 ORTHO05D005409 6.5e-79 297.7 198 74.2
Cc05_g07440 Coffea canephora HOM05D004354 ORTHO05D005409 8.5e-79 297.4 198 73.7
Lj1A714G27 Lonicera japonica HOM05D004354 ORTHO05D005409 8.5e-79 297.4 198 73.2
Solyc07g053850.3 Solanum lycopersicum HOM05D004354 ORTHO05D005409 1.1e-78 297.0 198 73.2
PGSC0003DMG400013734 Solanum tuberosum HOM05D004354 ORTHO05D005409 1.1e-78 297.0 198 74.2
Actinidia11091 Actinidia chinensis HOM05D004354 ORTHO05D005409 1.4e-78 296.6 198 73.2
Potri.017G012600 Populus trichocarpa HOM05D004354 ORTHO05D005409 1.9e-78 296.2 198 72.7
Sp7g26330 Schrenkiella parvula HOM05D004354 ORTHO05D005409 1.9e-78 296.2 198 73.2
GSVIVG01020571001 Vitis vinifera HOM05D004354 ORTHO05D005409 1.9e-78 296.2 198 72.7
CARHR236110 Cardamine hirsuta HOM05D004354 ORTHO05D005409 2.5e-78 295.8 198 72.7
CsaV3_6G015220 Cucumis sativus L. HOM05D004354 ORTHO05D005409 2.5e-78 295.8 198 75.8
FvH4_6g26490 Fragaria vesca HOM05D004354 ORTHO05D005409 2.5e-78 295.8 198 73.2
FAN14G3021 Fragaria x ananassa HOM05D004354 ORTHO05D005409 2.5e-78 295.8 198 73.2
Glyma.13G295600 Glycine max HOM05D004354 ORTHO05D005409 2.5e-78 295.8 198 73.2
Sopen07g027820 Solanum pennellii HOM05D004354 ORTHO05D005409 2.5e-78 295.8 198 72.7
Carub.0007s1237 Capsella rubella HOM05D004354 ORTHO05D005409 3.2e-78 295.4 198 72.2
Thhalv10024798m.g Eutrema salsugineum HOM05D004354 ORTHO05D005409 3.2e-78 295.4 198 73.2
RcHm_v2.0_Chr2g0127681 Rosa chinensis HOM05D004354 ORTHO05D005409 3.2e-78 295.4 198 73.2
Sc21g0003070 Simmondsia chinensis HOM05D004354 ORTHO05D005409 3.2e-78 295.4 198 72.7
PGSC0003DMG400032816 Solanum tuberosum HOM05D004354 ORTHO05D005409 3.2e-78 295.4 198 72.2
MELO3C013588.2 Cucumis melo HOM05D004354 ORTHO05D005409 4.2e-78 295.0 198 75.3
PGR142G0821 Punica granatum HOM05D004354 ORTHO05D005409 4.2e-78 295.0 198 72.7
Solyc12g005470.2 Solanum lycopersicum HOM05D004354 ORTHO05D005409 4.2e-78 295.0 198 73.7
AT4G28370 Arabidopsis thaliana HOM05D004354 ORTHO05D005409 5.5e-78 294.7 198 72.7
arahy.Tifrunner.gnm1.ann1.SG72Z3 Arachis hypogaea HOM05D004354 ORTHO05D005409 5.5e-78 294.7 198 73.7
FAN05G5576 Fragaria x ananassa HOM05D004354 ORTHO05D005409 5.5e-78 294.7 197 73.6
Gohir.A03G155600 Gossypium hirsutum HOM05D004354 ORTHO05D005409 5.5e-78 294.7 198 73.2
Potri.007G139300 Populus trichocarpa HOM05D004354 ORTHO05D005409 5.5e-78 294.7 198 71.7
QL08p039658 Quercus lobata HOM05D004354 ORTHO05D005409 5.5e-78 294.7 198 73.2
BcaB03g12570 Brassica carinata HOM05D004354 ORTHO05D005409 7.2e-78 294.3 198 72.7
VMungo1080G0203 Vigna mungo HOM05D004354 ORTHO05D005409 7.2e-78 294.3 198 72.7
arahy.Tifrunner.gnm1.ann1.5TEV2E Arachis hypogaea HOM05D004354 ORTHO05D005409 9.4e-78 293.9 198 73.2
Glyma.12G205300 Glycine max HOM05D004354 ORTHO05D005409 9.4e-78 293.9 198 72.7
Thecc.02G182400 Theobroma cacao HOM05D004354 ORTHO05D005409 9.4e-78 293.9 198 72.7
EL10Ac9g20792 Beta vulgaris HOM05D004354 ORTHO05D005409 1.2e-77 293.5 198 73.2
BcaC07g38328 Brassica carinata HOM05D004354 ORTHO05D005409 1.2e-77 293.5 198 72.2
C08p10830 Brassica napus HOM05D004354 ORTHO05D005409 1.2e-77 293.5 198 72.2
MD17G1236500 Malus domestica HOM05D004354 ORTHO05D005409 1.2e-77 293.5 198 72.7
Phvul.005G102100 Phaseolus vulgaris HOM05D004354 ORTHO05D005409 1.2e-77 293.5 198 72.2
Cfa014637 Carpinus fangiana HOM05D004354 ORTHO05D005409 1.6e-77 293.1 198 72.2
ClCG02G017760 Citrullus lanatus HOM05D004354 ORTHO05D005409 1.6e-77 293.1 198 74.2
Gohir.D02G178700 Gossypium hirsutum HOM05D004354 ORTHO05D005409 1.6e-77 293.1 198 72.7
Gorai.005G200400 Gossypium raimondii HOM05D004354 ORTHO05D005409 1.6e-77 293.1 198 72.7
BolC8t48758H Brassica oleracea HOM05D004354 ORTHO05D005409 2.1e-77 292.7 198 71.7
Eucgr.K01043 Eucalyptus grandis HOM05D004354 ORTHO05D005409 2.1e-77 292.7 198 71.7
Lalb_Chr19g0135191 Lupinus albus HOM05D004354 ORTHO05D005409 2.1e-77 292.7 198 70.7
Nitab4.5_0001184g0100 Nicotiana tabacum HOM05D004354 ORTHO05D005409 2.1e-77 292.7 198 73.7
Prupe.3G139300 Prunus persica HOM05D004354 ORTHO05D005409 2.1e-77 292.7 198 72.7
Aa31LG2G22230 Aethionema arabicum HOM05D004354 ORTHO05D005409 2.7e-77 292.4 198 71.7
A08p20090 Brassica napus HOM05D004354 ORTHO05D005409 3.6e-77 292.0 198 72.2
BraA08t33968Z Brassica rapa HOM05D004354 ORTHO05D005409 3.6e-77 292.0 198 72.2
Haze_13201 Corylus avellana HOM05D004354 ORTHO05D005409 4.6e-77 291.6 198 71.7
Manes.13G144800 Manihot esculenta HOM05D004354 ORTHO05D005409 4.6e-77 291.6 198 71.7
PSO541G1897 Papaver somniferum HOM05D004354 ORTHO05D005409 6.1e-77 291.2 198 72.7
AL7G24220 Arabidopsis lyrata HOM05D004354 ORTHO05D005409 7.9e-77 290.8 198 71.7
Lj3g0011593 Lotus japonicus HOM05D004354 ORTHO05D005409 1.0e-76 290.4 198 70.7
Peaxi162Scf00008g00611 Petunia axillaris HOM05D004354 ORTHO05D005409 1.0e-76 290.4 198 72.7
Sp3g33900 Schrenkiella parvula HOM05D004354 ORTHO05D005409 1.0e-76 290.4 198 71.2
TAR626G1453 Trochodendron aralioides HOM05D004354 ORTHO05D005409 1.0e-76 290.4 199 72.4
AT2G20650 Arabidopsis thaliana HOM05D004354 ORTHO05D005409 1.4e-76 290.0 198 70.2
unitig_22.g5828 Utricularia gibba HOM05D004354 ORTHO05D005409 1.4e-76 290.0 199 69.8
Aa31LG8G17560 Aethionema arabicum HOM05D004354 ORTHO05D005409 1.8e-76 289.7 198 70.7
MD09G1244500 Malus domestica HOM05D004354 ORTHO05D005409 1.8e-76 289.7 198 71.2
FAN09G2589 Fragaria x ananassa HOM05D004354 ORTHO05D005409 2.3e-76 289.3 198 72.2
Sed0026522 Sechium edule HOM05D004354 ORTHO05D005409 2.3e-76 289.3 198 73.2
AL3G53730 Arabidopsis lyrata HOM05D004354 ORTHO05D005409 3.0e-76 288.9 198 69.7
Lj3g0017215 Lotus japonicus HOM05D004354 ORTHO05D005409 3.0e-76 288.9 198 69.7
BraA07t27805Z Brassica rapa HOM05D004354 ORTHO05D005409 3.9e-76 288.5 198 70.7
Thhalv10002192m.g Eutrema salsugineum HOM05D004354 ORTHO05D005409 3.9e-76 288.5 198 70.7
Aqoxy1G02375 Aquilegia oxysepala HOM05D004354 ORTHO05D005409 5.1e-76 288.1 198 72.2
A07p00120 Brassica napus HOM05D004354 ORTHO05D005409 5.1e-76 288.1 198 70.2
Cpa.g.sc83.63 Carica papaya HOM05D004354 ORTHO05D005409 5.1e-76 288.1 198 70.7
Lsat_1_v5_gn_4_66820 Lactuca sativa HOM05D004354 ORTHO05D005409 5.1e-76 288.1 198 69.7
TWI23G0225 Tripterygium wilfordii HOM05D004354 ORTHO05D005409 5.1e-76 288.1 198 71.2
Sed0007610 Sechium edule HOM05D004354 ORTHO05D005409 6.7e-76 287.7 198 72.2
PSO675G5152 Papaver somniferum HOM05D004354 ORTHO05D005409 8.8e-76 287.3 198 71.7
Carub.0003s3517 Capsella rubella HOM05D004354 ORTHO05D005409 1.1e-75 287.0 198 69.2
Glyma.06G290800 Glycine max HOM05D004354 ORTHO05D005409 1.1e-75 287.0 197 71.1
Ca_09445_v3 Cicer arietinum L. HOM05D004354 ORTHO05D005409 1.5e-75 286.6 198 70.2
ECA234G2175 Erigeron canadensis HOM05D004354 ORTHO05D005409 1.5e-75 286.6 198 69.2
ATR0763G074 Amborella trichopoda HOM05D004354 ORTHO05D005409 2.0e-75 286.2 197 71.1
CARHR111300 Cardamine hirsuta HOM05D004354 ORTHO05D005409 2.0e-75 286.2 198 69.7
BcaC06g36756 Brassica carinata HOM05D004354 ORTHO05D005409 2.6e-75 285.8 198 69.7
C07p00280 Brassica napus HOM05D004354 ORTHO05D005409 2.6e-75 285.8 198 69.7
BolC7t40478H Brassica oleracea HOM05D004354 ORTHO05D005409 2.6e-75 285.8 198 69.7
Glyma.12G116100 Glycine max HOM05D004354 ORTHO05D005409 2.6e-75 285.8 197 71.1
THA.LOC104804057 Tarenaya hassleriana HOM05D004354 ORTHO05D005409 2.6e-75 285.8 198 70.7
TWI59G0686 Tripterygium wilfordii HOM05D004354 ORTHO05D005409 2.6e-75 285.8 198 70.2
Medtr4g078525 Medicago truncatula HOM05D004354 ORTHO05D005409 4.4e-75 285.0 198 69.7
Ca_18937_v3 Cicer arietinum L. HOM05D004354 ORTHO05D005409 7.4e-75 284.3 198 69.2
Zm00001eb322160 Zea mays HOM05D004354 ORTHO05D005409 9.7e-75 283.9 198 69.7
BcaB03g16858 Brassica carinata HOM05D004354 ORTHO05D005409 1.3e-74 283.5 198 69.7
CDE05G0895 Ceratophyllum demersum HOM05D004354 ORTHO05D005409 2.2e-74 282.7 198 69.2
TPR.G2846 Trifolium pratense HOM05D004354 ORTHO05D005409 2.2e-74 282.7 198 69.2
Lalb_Chr03g0029541 Lupinus albus HOM05D004354 ORTHO05D005409 2.8e-74 282.3 198 67.7
Phvul.011G119730 Phaseolus vulgaris HOM05D004354 ORTHO05D005409 3.7e-74 282.0 197 69.5
Psat7g168720 Pisum sativum HOM05D004354 ORTHO05D005409 6.3e-74 281.2 198 69.2
CANSAT64G2319 Cannabis sativa HOM05D004354 ORTHO05D005409 2.4e-73 279.3 218 64.7
Mapoly0093s0076 Marchantia polymorpha HOM05D004354 ORTHO05D005409 6.9e-73 277.7 197 70.1
HanXRQChr05g0143301 Helianthus annuus HOM05D004354 ORTHO05D005409 9.1e-73 277.3 198 65.7
Pp3c21_16510 Physcomitrium patens HOM05D004354 ORTHO05D005409 3.4e-72 275.4 198 68.2
SMO351G0175 Selaginella moellendorffii HOM05D004354 ORTHO05D005409 3.4e-72 275.4 197 70.1
Lalb_Chr01g0005151 Lupinus albus HOM05D004354 ORTHO05D005409 4.5e-72 275.0 198 66.2
THA.LOC104824696 Tarenaya hassleriana HOM05D004354 ORTHO05D005409 4.5e-72 275.0 198 65.2
CSS0000262 Camellia sinensis var. sinensis HOM05D004354 ORTHO05D005409 5.9e-72 274.6 198 70.2
Hund01030 Selenicereus undatus HOM05D004354 ORTHO05D005409 1.3e-71 273.5 196 67.3
vmacro12326 Vaccinium macrocarpon HOM05D004354 ORTHO05D005409 1.1e-70 270.4 213 66.2
MBI18_g19626_MAGBIO Magnolia biondii HOM05D004354 ORTHO05D005409 4.2e-70 268.5 196 68.4
Pp3c18_8870 Physcomitrium patens HOM05D004354 ORTHO05D005409 5.5e-70 268.1 217 62.7
Atru.chr6.2897 Acer truncatum HOM05D004354 ORTHO05D005409 7.2e-70 267.7 171 76.6
arahy.Tifrunner.gnm1.ann1.6AZK3P Arachis hypogaea HOM05D004354 ORTHO05D005409 1.1e-67 260.4 196 66.8
arahy.Tifrunner.gnm1.ann1.7S1AZB Arachis hypogaea HOM05D004354 ORTHO05D005409 2.6e-67 259.2 196 66.3
SGA_v2.0_scaffold70G23519 Striga asiatica HOM05D004354 ORTHO05D005409 5.7e-67 258.1 162 80.9
AUR62038896 Chenopodium quinoa HOM05D004354 ORTHO05D005409 4.2e-62 241.9 167 70.1
AUR62033735 Chenopodium quinoa HOM05D004354 ORTHO05D005409 1.0e-55 220.7 222 53.2
CBR_g36920 Chara braunii HOM05D004354 ORTHO05D005409 1.2e-53 213.8 197 58.9
SEGI_25482 Sequoiadendron giganteum HOM05D004354 ORTHO05D005409 1.2e-48 197.2 145 63.4
SEGI_11328 Sequoiadendron giganteum HOM05D004354 ORTHO05D005409 1.6e-48 196.8 145 62.8
PRCOL_00005121 Prasinoderma coloniale HOM05D000722 ORTHO05D000590 6.8e-36 154.8 192 40.1
Cre08.g381900 Chlamydomonas reinhardtii HOM05D004354 ORTHO05D005409 4.6e-32 142.1 200 36.0
MCO03G390 Micromonas commoda HOM05D004354 ORTHO05D005409 5.8e-27 125.2 141 45.4
HPP92_012418 Vanilla planifolia HOM05D004354 ORTHO05D005409 4.7e-13 79.0 52 75.0
Actinidia11016 Actinidia chinensis HOM05D004354 ORTHO05D005409 1.1e-09 67.8 48 70.8
AUR62033734 Chenopodium quinoa HOM05D004354 ORTHO05D005409 7.3e-06 55.1 31 87.1
AUR62038895 Chenopodium quinoa HOM05D004354 ORTHO05D005409 7.3e-06 55.1 35 80.0


User provided reference genes

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