Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold37G14644 Striga asiatica HOM05D002360 ORTHO05D006971 9.7e-48 193.4 113 100.0
Migut.I01145 Erythranthe guttata HOM05D002360 ORTHO05D006971 2.9e-15 85.5 58 74.1
SGA_v2.0_scaffold4G02100 Striga asiatica HOM05D002360 ORTHO05D006971 3.7e-15 85.1 58 74.1
CDE07G0903 Ceratophyllum demersum HOM05D002360 ORTHO05D006971 1.1e-14 83.6 58 72.4
SalBow6G3918 Salvia bowleyana HOM05D002360 ORTHO05D006971 1.4e-14 83.2 58 72.4
Hma1.2p1_1104F.1_g257530 Hydrangea macrophylla HOM05D002360 ORTHO05D006971 1.9e-14 82.8 58 72.4
Cc04_g00540 Coffea canephora HOM05D002360 ORTHO05D006971 3.2e-14 82.0 58 70.7
Eucgr.H02625 Eucalyptus grandis HOM05D002360 ORTHO05D006971 3.2e-14 82.0 58 70.7
MSTRG.10902 Avicennia marina HOM05D002360 ORTHO05D006971 4.1e-14 81.6 58 70.7
Rhsim12G0213700 Rhododendron simsii HOM05D002360 ORTHO05D006971 4.1e-14 81.6 58 70.7
Sc15g0000870 Simmondsia chinensis HOM05D002360 ORTHO05D006971 4.1e-14 81.6 58 70.7
CSS0024321 Camellia sinensis var. sinensis HOM05D002360 ORTHO05D006971 5.4e-14 81.3 58 72.4
CSS0045415 Camellia sinensis var. sinensis HOM05D002360 ORTHO05D006971 5.4e-14 81.3 58 72.4
unitig_747.g21723 Utricularia gibba HOM05D002360 ORTHO05D006971 5.4e-14 81.3 58 70.7
CDE06G2307 Ceratophyllum demersum HOM05D002360 ORTHO05D006971 7.0e-14 80.9 58 70.7
Atru.chr3.1763 Acer truncatum HOM05D002360 ORTHO05D006971 9.2e-14 80.5 58 70.7
CAN.G790.47 Capsicum annuum HOM05D002360 ORTHO05D006971 9.2e-14 80.5 58 69.0
PGR083G1913 Punica granatum HOM05D002360 ORTHO05D006971 9.2e-14 80.5 58 69.0
Actinidia31141 Actinidia chinensis HOM05D002360 ORTHO05D006971 1.2e-13 80.1 58 70.7
PSO135G0108 Papaver somniferum HOM05D002360 ORTHO05D006971 1.2e-13 80.1 58 69.0
PSO135G0985 Papaver somniferum HOM05D002360 ORTHO05D006971 1.2e-13 80.1 58 69.0
Prupe.1G174100 Prunus persica HOM05D002360 ORTHO05D006971 1.2e-13 80.1 58 70.7
RcHm_v2.0_Chr4g0411571 Rosa chinensis HOM05D002360 ORTHO05D006971 1.2e-13 80.1 58 69.0
GSVIVG01016650001 Vitis vinifera HOM05D002360 ORTHO05D006971 1.2e-13 80.1 58 67.2
Carub.0007s2818 Capsella rubella HOM05D002360 ORTHO05D006971 1.6e-13 79.7 58 69.0
Cpa.g.sc157.3 Carica papaya HOM05D002360 ORTHO05D006971 1.6e-13 79.7 58 69.0
FAN07G1347 Fragaria x ananassa HOM05D002360 ORTHO05D006971 1.6e-13 79.7 58 69.0
FAN12G1508 Fragaria x ananassa HOM05D002360 ORTHO05D006971 1.6e-13 79.7 58 69.0
FAN17G2355 Fragaria x ananassa HOM05D002360 ORTHO05D006971 1.6e-13 79.7 58 69.0
FAN22G0477 Fragaria x ananassa HOM05D002360 ORTHO05D006971 1.6e-13 79.7 58 69.0
Nitab4.5_0006338g0050 Nicotiana tabacum HOM05D002360 ORTHO05D006971 1.6e-13 79.7 58 69.0
TPR.G18101 Trifolium pratense HOM05D002360 ORTHO05D006971 1.6e-13 79.7 58 69.0
TAR371G0365 Trochodendron aralioides HOM05D002360 ORTHO05D006971 1.6e-13 79.7 58 69.0
Glyma.11G253000 Glycine max HOM05D002360 ORTHO05D006971 2.0e-13 79.3 58 69.0
Nitab4.5_0004950g0020 Nicotiana tabacum HOM05D002360 ORTHO05D006971 2.0e-13 79.3 58 69.0
Phvul.001G264200 Phaseolus vulgaris HOM05D002360 ORTHO05D006971 2.0e-13 79.3 58 67.2
Aqoxy7G00909 Aquilegia oxysepala HOM05D002360 ORTHO05D006971 2.7e-13 79.0 58 69.0
CANSAT78G1063 Cannabis sativa HOM05D002360 ORTHO05D006971 2.7e-13 79.0 58 67.2
Glyma.18G003900 Glycine max HOM05D002360 ORTHO05D006971 2.7e-13 79.0 58 67.2
Lalb_Chr11g0075841 Lupinus albus HOM05D002360 ORTHO05D006971 2.7e-13 79.0 58 69.0
Psat5g097840 Pisum sativum HOM05D002182 ORTHO05D008382 2.7e-13 79.0 58 67.2
Actinidia25995 Actinidia chinensis HOM05D002360 ORTHO05D006971 3.5e-13 78.6 58 67.2
Ca_16437_v3 Cicer arietinum L. HOM05D002360 ORTHO05D006971 3.5e-13 78.6 58 67.2
MD04G1023800 Malus domestica HOM05D002360 ORTHO05D006971 3.5e-13 78.6 58 69.0
Medtr3g084850 Medicago truncatula HOM05D002360 ORTHO05D006971 3.5e-13 78.6 58 67.2
Solyc03g123760.3 Solanum lycopersicum HOM05D002360 ORTHO05D006971 3.5e-13 78.6 58 69.0
PGSC0003DMG400009156 Solanum tuberosum HOM05D002360 ORTHO05D006971 3.5e-13 78.6 58 69.0
VMungo1383G0373 Vigna mungo HOM05D002182 ORTHO05D008382 3.5e-13 78.6 58 67.2
Ciclev10005632m.g Citrus clementina HOM05D002360 ORTHO05D006971 4.6e-13 78.2 58 69.0
Duzib151G1143 Durio zibethinus HOM05D002360 ORTHO05D006971 4.6e-13 78.2 58 65.5
FvH4_4g12690 Fragaria vesca HOM05D002360 ORTHO05D006971 4.6e-13 78.2 58 69.0
Lalb_Chr23g0278241 Lupinus albus HOM05D002360 ORTHO05D006971 4.6e-13 78.2 58 67.2
Os03g0184000 Oryza sativa ssp. japonica HOM05D002360 ORTHO05D006971 4.6e-13 78.2 58 65.5
Peaxi162Scf00038g02444 Petunia axillaris HOM05D002360 ORTHO05D006971 4.6e-13 78.2 58 67.2
Pp3c21_12310 Physcomitrium patens HOM05D002360 ORTHO05D006971 4.6e-13 78.2 58 65.5
Aa31LG9G3180 Aethionema arabicum HOM05D002360 ORTHO05D006971 6.0e-13 77.8 58 67.2
Ah.15g094770 Amaranthus hybridus HOM05D002360 ORTHO05D006971 6.0e-13 77.8 58 67.2
EL10Ac7g18238 Beta vulgaris HOM05D002360 ORTHO05D006971 6.0e-13 77.8 58 67.2
AUR62025597 Chenopodium quinoa HOM05D002360 ORTHO05D006971 6.0e-13 77.8 58 67.2
Haze_11694 Corylus avellana HOM05D002360 ORTHO05D006971 6.0e-13 77.8 58 67.2
Thhalv10024795m.g Eutrema salsugineum HOM05D002360 ORTHO05D006971 6.0e-13 77.8 58 67.2
Lj6g0010237 Lotus japonicus HOM05D002360 ORTHO05D006971 6.0e-13 77.8 58 69.0
Zm00001eb006300 Zea mays HOM05D002360 ORTHO05D006971 6.0e-13 77.8 58 67.2
arahy.Tifrunner.gnm1.ann1.M5MKEZ Arachis hypogaea HOM05D002360 ORTHO05D006971 7.8e-13 77.4 58 63.8
arahy.Tifrunner.gnm1.ann1.TUF7J0 Arachis hypogaea HOM05D002360 ORTHO05D006971 7.8e-13 77.4 58 63.8
CARHR220290 Cardamine hirsuta HOM05D002360 ORTHO05D006971 7.8e-13 77.4 58 67.2
Sopen03g041530 Solanum pennellii HOM05D002360 ORTHO05D006971 7.8e-13 77.4 58 67.2
vmacro17066 Vaccinium macrocarpon HOM05D002360 ORTHO05D006971 7.8e-13 77.4 58 67.2
BcaB02g08628 Brassica carinata HOM05D002360 ORTHO05D006971 1.0e-12 77.0 58 65.5
BcaC02g09347 Brassica carinata HOM05D002360 ORTHO05D006971 1.0e-12 77.0 58 65.5
A04p07910 Brassica napus HOM05D002360 ORTHO05D006971 1.0e-12 77.0 58 65.5
A08p24280 Brassica napus HOM05D002360 ORTHO05D006971 1.0e-12 77.0 58 65.5
C04p41610 Brassica napus HOM05D002360 ORTHO05D006971 1.0e-12 77.0 58 65.5
BolC4t25740H Brassica oleracea HOM05D002360 ORTHO05D006971 1.0e-12 77.0 58 65.5
BraA04t16480Z Brassica rapa HOM05D002360 ORTHO05D006971 1.0e-12 77.0 58 65.5
BraA08t34383Z Brassica rapa HOM05D002360 ORTHO05D006971 1.0e-12 77.0 58 65.5
ClCG07G015130 Citrullus lanatus HOM05D002360 ORTHO05D006971 1.0e-12 77.0 58 67.2
Nn6g31492 Nelumbo nucifera HOM05D002360 ORTHO05D006971 1.0e-12 77.0 58 67.2
Potri.002G235200 Populus trichocarpa HOM05D002360 ORTHO05D006971 1.0e-12 77.0 58 67.2
Potri.014G148700 Populus trichocarpa HOM05D002360 ORTHO05D006971 1.0e-12 77.0 58 67.2
Sabra02G0179300 Salix brachista HOM05D002360 ORTHO05D006971 1.0e-12 77.0 58 67.2
Thecc.04G190000 Theobroma cacao HOM05D002360 ORTHO05D006971 1.0e-12 77.0 58 65.5
ATR0006G040 Amborella trichopoda HOM05D002360 ORTHO05D006971 1.3e-12 76.6 58 65.5
AL7G42150 Arabidopsis lyrata HOM05D002360 ORTHO05D006971 1.3e-12 76.6 58 65.5
AT4G14210 Arabidopsis thaliana HOM05D002360 ORTHO05D006971 1.3e-12 76.6 58 65.5
BcaNung05576 Brassica carinata HOM05D002360 ORTHO05D006971 1.3e-12 76.6 58 65.5
CiPaw.01G111500 Carya illinoinensis HOM05D002360 ORTHO05D006971 1.3e-12 76.6 58 67.2
AUR62001382 Chenopodium quinoa HOM05D002360 ORTHO05D006971 1.3e-12 76.6 58 65.5
COL.COLO4_35973 Corchorus olitorius HOM05D002360 ORTHO05D006971 1.3e-12 76.6 54 68.5
Lj9A539T91 Lonicera japonica HOM05D002360 ORTHO05D006971 1.3e-12 76.6 58 65.5
THA.LOC104822231 Tarenaya hassleriana HOM05D002360 ORTHO05D006971 1.3e-12 76.6 58 65.5
Gohir.A10G132000 Gossypium hirsutum HOM05D002360 ORTHO05D006971 1.7e-12 76.3 58 65.5
Gohir.D10G135000 Gossypium hirsutum HOM05D002360 ORTHO05D006971 1.7e-12 76.3 58 65.5
Gorai.011G149900 Gossypium raimondii HOM05D002360 ORTHO05D006971 1.7e-12 76.3 58 65.5
MBI19_g32880_MAGBIO Magnolia biondii HOM05D002360 ORTHO05D006971 1.7e-12 76.3 58 65.5
Mapoly0108s0060 Marchantia polymorpha HOM05D002360 ORTHO05D006971 1.7e-12 76.3 58 65.5
BcaC01g00209 Brassica carinata HOM05D002360 ORTHO05D006971 2.3e-12 75.9 58 63.8
C03p76930 Brassica napus HOM05D002360 ORTHO05D006971 2.3e-12 75.9 58 63.8
BolC3t19948H Brassica oleracea HOM05D002360 ORTHO05D006971 2.3e-12 75.9 58 63.8
MELO3C017772.2 Cucumis melo HOM05D002360 ORTHO05D006971 2.3e-12 75.9 58 65.5
CsaV3_4G002690 Cucumis sativus L. HOM05D002360 ORTHO05D006971 2.3e-12 75.9 58 65.5
Duzib212G0167 Durio zibethinus HOM05D002360 ORTHO05D006971 2.3e-12 75.9 58 65.5
ECA232G4402 Erigeron canadensis HOM05D002360 ORTHO05D006971 2.3e-12 75.9 58 63.8
Manes.05G193700 Manihot esculenta HOM05D002360 ORTHO05D006971 2.3e-12 75.9 58 65.5
Sp7g12070 Schrenkiella parvula HOM05D002360 ORTHO05D006971 2.3e-12 75.9 58 63.8
TWI63G1808 Tripterygium wilfordii HOM05D002360 ORTHO05D006971 2.3e-12 75.9 58 67.2
QL06p028316 Quercus lobata HOM05D002360 ORTHO05D006971 3.0e-12 75.5 58 63.8
Zm00001eb138980 Zea mays HOM05D001168 ORTHO05D005551 3.0e-12 75.5 58 65.5
Lsat_1_v5_gn_4_89381 Lactuca sativa HOM05D002360 ORTHO05D006971 3.9e-12 75.1 58 63.8
HPP92_016649 Vanilla planifolia HOM05D002360 ORTHO05D006971 5.0e-12 74.7 58 62.1
Sed0014208 Sechium edule HOM05D002360 ORTHO05D006971 8.6e-12 73.9 58 63.8
TWI38G1596 Tripterygium wilfordii HOM05D002360 ORTHO05D006971 1.1e-11 73.6 58 63.8
AagrBONN_evm.TU.Sc2ySwM_368.2776 Anthoceros agrestis HOM05D002360 ORTHO05D006971 1.9e-11 72.8 58 62.1
SMO141G0153 Selaginella moellendorffii HOM05D002360 ORTHO05D006971 1.9e-11 72.8 57 57.9
HanXRQChr15g0497361 Helianthus annuus HOM05D002360 ORTHO05D006971 2.5e-11 72.4 58 62.1
TAR375G0345 Trochodendron aralioides HOM05D002360 ORTHO05D006971 2.5e-11 72.4 58 62.1
SEGI_04488 Sequoiadendron giganteum HOM05D002360 ORTHO05D006971 1.2e-10 70.1 54 57.4
SEGI_20141 Sequoiadendron giganteum HOM05D002360 ORTHO05D006971 1.2e-10 70.1 54 57.4
DCAR_016085 Daucus carota HOM05D002360 ORTHO05D006971 3.6e-10 68.6 50 66.0
CBR_g29276 Chara braunii HOM05D002360 ORTHO05D000002 2.3e-09 65.9 58 55.2
PRCOL_00001058 Prasinoderma coloniale HOM05D002360 ORTHO05D006971 6.8e-09 64.3 65 49.2
Cre12.g509650 Chlamydomonas reinhardtii HOM05D002360 ORTHO05D006971 8.9e-09 63.9 55 56.4
SGA_v2.0_scaffold32G13108 Striga asiatica HOM05D002360 ORTHO05D406359 2.0e-08 62.8 45 73.3
MCO04G494 Micromonas commoda HOM05D002360 ORTHO05D006971 2.2e-07 59.3 62 48.4


User provided reference genes

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