Gene: vmacro17066

General Information

Structural Information

  • Species Vaccinium macrocarpon
  • Gene Identifier vmacro17066
  • Transcript Identifier vmacro17066-RA
  • Gene Type Coding gene
  • Location scaffold00313_Vaccinium_macrocarpon_Stevens_v1 : 218373-229371 : negative

Gene Family Information

  • ID HOM05D002360
  • #Genes/#Species 288/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id vmacro17066_Vaccinium_macrocarpon_Stevens_v1

Descriptions

  • Description Similar to PDS: 15-cis-phytoene desaturase, chloroplastic/chromoplastic (Arabidopsis thaliana OX=3702)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016117
ISO
PLAZA Integrative Orthologycarotenoid biosynthetic process AT4G14210
GO:0016120
ISO
PLAZA Integrative Orthologycarotene biosynthetic process Solyc03g123760.3

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016491
IEA
InterProoxidoreductase activity
GO:0016166
ISO
PLAZA Integrative Orthologyphytoene dehydrogenase activity Solyc03g123760.3

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT4G14210
GO:0009941
ISO
PLAZA Integrative Orthologychloroplast envelope AT4G14210
GO:0009534
ISO
PLAZA Integrative Orthologychloroplast thylakoid AT4G14210

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036188 FAD/NAD(P)-binding domain superfamily
IPR002937 Amine oxidase
Mapman id Description
9.1.6.1.2 Secondary metabolism.terpenoids.carotenoid biosynthesis.carotenes.phytoene desaturase (PDS)